pip4p2 (LOC106570754)


Basic Information

Item Value
gene id pip4p2
gene name LOC106570754
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 2766685 ~ 2800192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036970805.1
CTGTGCCTGGGTGGAACGGGTTGGGTTGGGgtgtctggctctctctctgcattCAGTCGCTCACAACCCTCCCACCCGGTCCCGTTGAGGTCTGTGTAGCTCCACCTCCGAGGAAGTGCCCTCTCCGGAGCAGTAGGCTACCACGGATCTGCTGGCCGCCCCCTCCCAAGGAAACACTGGCCAGAGGAGAGGCTCCGCCGCATCGGCTCTACTTCTTCTCGGTGTTTATTCGTCTGGTTTGGGTGAACTGCTGCCGCCATGGCCGACGAAGGCATGGATGAACGGTCCCCGCTGCTCTCAGCACCGAACTCTGGGAATGTCACACCGTCGGGACCGCCTTCGTACCTGCAGGACACGAGCCCGAGAGCTGAACTCCCTCCCCCCTACACAGCCATCGCCAGTCCCGACCCAGGGGGGGTACCCGTCATCAACTGCCGGGTGTGTCAGTCTCTCATTAACCTGGATGGCAAGCTTCATCAGCACGTGGTGAAGTGTACTGTGTGCAACGAGGCCACGCCCATCAAAAACCCACCGACTGGGAAGAAGTATGTACGCTGTCCCTGTAACTGTCTCCTCATCTGCAAAGACTCATCTAGGAGGATAGGATGCCCCAGACCCAACTGCAGACGCATCATCAACCTGAGCCCGGTGATGGTGATTCCAGAGGAGCAGCCGGCCCAGCCGGCCCTGCCAGTCCAGCCTGAGGGCACGAGGGTGGTCTGTGGCCACTGTGGAAACGCCTTCCTTTGGATGGAGCTCCGATTTAACACACTAGCAAAATGCCctcactgcaaaaaaatATCGTCTGTGGGTAGCGCTCTTCCAAGGAGGCGTTGTTGTGCCTACATCACTGTGGGACTGATCTGCATCTTTATCGGAGTGGGATTAACAgTGGGCACTCAGGACTTTGCCAGTCGTTACCATGCCACCTATGTGTCCTGGGCGTTCTCCTACCTCCTGGGTCTGATCTGTCTGATACGAGCTTGTTACTGGGGAGCCATCAAAGTCAGCTATCCAGAGAACAGCTTTTcctagacagacagaccatcaaAGTCAGCTATCCAGAGAACAGCTTTTCCTAGACAGACAGACGGTTGTACTGTAAATCTTCCTTTAAGTTGTTCACGTTGTTGTTGTTTCGATTCTGACAGCTCCAAGGTCAGTCCGGTCACTCctggtcctggagaaaacagaaaTCCAGCCCGGGTTTTGCAATTAACTCAAGAAATCAGATCAGTAATTAAGATATTAATTGGTTCGATAAATCATAAAGTGTGATTTAAGTAATTGATATTGAAATGAAGAAACTTGACTTTGGTAAATATGATGATTACAAAGAAAGCCAGGTGGCTGGATTCCATTTCctggactggctgactgactggctgactgactgactggttgactgactgactgactgagtgactggttgactgactgactggttgactgactgactgactgactggttgactgactgactggctggctg

Function

NR:

description
type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase

GO: NA

KEGG:

id description
K13084 TMEM55; phosphatidylinositol-4,5-bisphosphate 4-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036970805.1 True 1492 mRNA 0.53 7 2766685 2800192

Neighbor

gene id symbol gene type direction distance location
cbfa2t2 runx1t1 coding upstream 80653 2525059 ~ 2686032 (+)
triqk triqk coding upstream 511566 2209019 ~ 2255119 (+)
LOC118946536 NA coding upstream 872733 1892590 ~ 1893952 (+)
lratd2a LOC106589121 coding upstream 915435 1849460 ~ 1851250 (+)
fam91a1 LOC106589122 coding upstream 941567 1711555 ~ 1825118 (+)
LOC110487823 LOC106570755 coding downstream 16284 2816476 ~ 2845566 (+)
LOC110487826 znf519 coding downstream 83736 2883928 ~ 2886784 (+)
angpt2b LOC106570762 coding downstream 129952 2930144 ~ 2992088 (+)
LOC118946537 NA coding downstream 360026 3160218 ~ 3181800 (+)
pef1 pef1 coding downstream 2202786 5002978 ~ 5011804 (+)
G2288979 NA non-coding upstream 89186 2676704 ~ 2677499 (+)
G2288933 NA non-coding upstream 185305 2579616 ~ 2581380 (+)
G2288926 NA non-coding upstream 197994 2567167 ~ 2568691 (+)
G2288915 NA non-coding upstream 221954 2544201 ~ 2544731 (+)
G2288912 NA non-coding upstream 224770 2541526 ~ 2541915 (+)
G2289029 NA non-coding downstream 21698 2821890 ~ 2822153 (+)
G2289040 NA non-coding downstream 34587 2834779 ~ 2835420 (+)
G2289026 NA non-coding downstream 38925 2839117 ~ 2839718 (+)
G2289032 NA non-coding downstream 77601 2877793 ~ 2879143 (+)
G2289049 NA non-coding downstream 93455 2893647 ~ 2902038 (+)
G2288814 NA other upstream 385290 2380447 ~ 2381395 (+)
G2288669 NA other upstream 442503 2321874 ~ 2324182 (+)
G2287973 NA other upstream 1492515 1273374 ~ 1274170 (+)
G2287470 NA other upstream 2279024 486793 ~ 487661 (+)
G2289325 NA other downstream 260250 3060442 ~ 3060779 (+)
G2290395 NA other downstream 1648697 4448889 ~ 4449571 (+)
G2290455 NA other downstream 1746712 4546904 ~ 4548844 (+)
smim12 smim12 other downstream 2214464 5014549 ~ 5018314 (+)
dlgap3 dlgap3 other downstream 2584459 5113201 ~ 5412625 (+)

Expression


Co-expression Network