dlgap3 (dlgap3)


Basic Information

Item Value
gene id dlgap3
gene name dlgap3
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5113201 ~ 5412625 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036970898.1
aGATTCCTGACTGACAGAGTGTGTGAGCGCTACAGTGGACTAGGGGATCAGTCTTGtggactgtgtgtttgtgagaagTCCTTTCTGCAGACATGGAGACCCATTTCCTGATGAGAGTGTTGTGAGTCCGTTGCAGCCCTGTCACGCCCACAGCGTCCCCTCTCGGCCCAGGCGGCCCACCACGGCCCCCTGGCCTCCTCCATGAAGGGTTACCAGGTCAGCCGCAGCCTGTCCCAGTACTCCTCTGTTGGAGAAGGGACACACACACCGTGTGACTGCGACCCTGACCCCCGCTCCGTCCGAGACTACGAACACTACGACGGAGCGGGACACCCCTACTACCCCCCCGGGGGTCCCCCAGAGCatcgtttcctctcctctcactctggAGGGGGGACGTTCCCCCGTTCCCACCCCAGCCATCACCCCGTGCCCCATCAGTACGACTCATGCGAAGAGTGCCTGTCCACGGTTGGGGGTCACGTGGCTAAGATGCACAGCCTGGATCAGTTTGAGAGGCAGCTTCCTCCTGACGGGTTCCACACCCTGCAGTACCAGAAGAGCGCCAGCGGGGCGGAACAGCGCGGCGAGAGCCCCTCCCGTATCCGCCACCTGGTTCACTCAGTCCAGAGACTCTTCGCCAAGTCCCACTCCCTCGAGGCGCCGTCGAAGAGGGAATACAACGGCACACGAGGAGGAGGGGATTAccgggaaagaggaggaggaggagaagaaaggagcggaggagaggagggcgTTGGGCATCATTATTCGGGCCACCAGTCCCGCTCGGTGAAGCGCAGCAAGTCTCGCGAGCGCTCCAAGAGCGGGGATGGGCGCCACGAGTCGTCCGGTCGGCGCCACCGGAACCGAACTGCCGGGTGGTGGAGCTCCGACGACAACCTAGACAGTGACAGCAGCTTTCTGGTAACCGCAGGCAACGCCGGGCCAGGTGGTCGAGGTGGCGGTCCAGGTGGCGGGCGAGGTGGCCACGAGAGTCTGGACGCTGCTATCCAGGAGCTGACCATGAAGAAACTGCCCAAGCAGGGGAGTGTACCACCAGGGCCCGGACCGGGGGAGTGCATGGCCTGTACCACTCTGGCCCTGGCAGGGGGGGAGGGTGGCGGAGGGGGAGTGGCAGGGTACCATGGAGGGCCAGGACAACACTCTTTGAAGAGGAGCACGTGGTCGGCCATGACGGTCAGCCAGGCTAGAGAGGTGTACCCATCGTCTGtccggggaggaggaggaggaggaggctatGACAAGGCCTTGGTACCTCTGGAGAACAAACTGAAGGAGAGGACCTTTCACTACCTACagGTCCCGTCAGACGGGGTGGAGTGGGCTGGGCTTGGGGGCTACCCAGGCGGGGGTGGTCCTgacggaggaggaggggagatccCCTGCAGGCGCATGCGGAGCGGCAGCTACGTCAAGGCCATGGGAGACGACGACAGTCAGGACTCTGACGCCAGTCCTAAATCCTCTCCTAAAACCACTATTATCGCCCAGAGAGAGGCCTTCAGACGCTCTGTCAGCATGGACCACAGatACTCGTGTAAGCAGTGTGTAGATGCTACGCTACCATATGCTCACAACATAAGCACGCCGAAGAGTCACGCACGCTCTCGGAGCTACACGCGGTCTCTGACCAGCTCACAGtTGGGTGACTCTCTGAATCGTCAGTTTGAGGCGGTGTGTGAGACCATGTttggagagatagagagtcagGCGGTGGAAGCCTTGGATCTGCCTGGCTGCTTCCGGACCCGTTCCCATAGTTACGTCCGCGCCATCCAGGCCGGCTGTTCCCAAGACGACGACTGCCTGTCCGTCTTCTCCATGTCAGGACCCAGCATCAAGGGAGGggttgtcatCCCATACCGTAAGGCtggccctccccctctccctccccgtATGTCTAAGCCTACGATCTCTGTGAGGGCTCAGAGCAGTACAGAGTCTACCCAGGATGCCTACTTCCAGAACACAGGCCAGCCTGCCCTGGGACGGCCCAGACAACACCAGAGCAGCTCTGTGGACCTGGGAATCACTGATGTTGCAGTGTCTGGTCAGACCTCCAGGGGATCCAGGGAAAGGGGTTGCTACACAGGACCAGGACAAGGCCGCTCCCGCCAGCACTCCAACTCTGCCGAGAGCCTGGATGGTGGCCCCCGGTGGGGCAGGGAGCTTGTACTCTATGGAGTTGGAGGACAAGGGCCCCCCAGAGTAAAACACAGCGGCTCCGCTGATAGTCTCTTGGAGGGGcccaggggaaaggagaggggggagagggatgtgGGACGGGCAGGGGGAAGTCTGGGGAAGTCTGCCTCCCTCCCACAGAACAGTATGGTGCTGAGcaagatgggaggaggaggaggaagaggaggaggacaggaggagaacaagacggagagaagaggaaggaattGGAGGCCGTCTATCGCTATACAGgtggaCAGCTCGGAGACCCTGTCAGACTCAGAACCGGATGgcaaggctctgagagaggttcACTCTATAGGGGTGCAGGTGGAGGAGGACAAGAGacGTGCTCGGTTCAAGCGCTCCAACAGTGTGACGGCCAGCGTCCAGGCAGACCTGGACCCAGAGGGCGGTTACCCGGGCCTCACCTTCGCTGTTCCTACCCAGGATAAGAGCCTCCAGTTCGGCTGCTCCTTCCAGAGACACTCCTCAGAGCCAGAGTCAGCCGACCAGTACGCAGAGTACCACCGCACGGTGCACACCCAGGGCCAGTGGGCCTACAGAGAAGACTATGTCCAGGATGGTTACGCTACAGACCCCCACCAGATCCCCCCGCTGCCCCCGCGGGCCCACTCCCCCCTGCCCCTCGCTGCAGACCGTGGTGGCTGGATAGGCACACCCCAGCCCTCACTGGAGGGGGGTCTCCGTAGTCTACCTGATTCCGGTCGCGCCTCGCCCTGTCTGAGAGACGGAGAGTTCTTCCTACGCCTCCTtcagacagaggtggagaggatggagggatggtgtcAGAACAtggaaagagaggcagaggagaacGAGCTGCCGGAGGAGgTTCTGGAGCTGATCCGTAATGCGGTGGGCAGTGCCCAGATGCTCATGACCCAGAAGGTCCAGCAGTTCTTCCGTCTGTGCCAGCAAAGCGTGgACCCGTTGGCGTACCCCCAGCCCACCTCTCAGGACCTGTCCGGGCTCTGGGACCTGCTCCAGCTCAACGTGGAAGACGTCAAGGGCAAGTTCCAGCACCTCCAGAGGCTCAAGGACTCCGGCTGGAGGCTTCCCCCAGACAAGAAAGATGACAAGAAGCTTCCTCCCCCACTACCAAAGAAGCCAGCTGGGGGGGTGAGCGGCAGTCTCCGTGCCGACAGCGTCAGCGACCTCTCAGTGGAACGAGGGGTAGGAGGAGGCGGAGGGGTGCTGGTGATGCCCCGTAGCGGGGGTGTGGGACGGGCCGTGCCTGTCCGGGAGAAGTCCTTAGACctgggggacagacagaggacGGAAGCACGCAGGAGACTGCTCCAGACCAAGAGGTCCTCTTCCTTCAGACAGAACTCAGCCACGGAGAGCGCCGACAGCATCGAGATCTACATCCCAGAGGCTCAGACCCGGCTCTGAACATGGAGATACAGCCCTTTATCCCAGTGAACAGAACCGACTCTGAACATGGGTGGAGATTTACATCCCGAGGCTCAGACACTGAACATGGACATATAAGGAGACCCGTATCAGACTTCTATCCTAACCTACAAGAACTTGAGATCTACAGATCTGACTCTGAACACTGGGACCGTTCTAAACGTGGCCCTATAACCTCCTATCGGACCACTAGACTACCCTAGATCAACAACAACCCTCCCAAGTCCCATACACTGAACCCCCTCAATGATGATGTTgaccaggggtgggcaactccagtcctccaggacaCGGTTGGTTTCACACTTTTTCCCCTTCCCTagaaaacacagctgattaatcaaatgtcATTCTAAACCGAAGATCATGATTCGGTGATTATTGAAGTCAGGTTTGTTAGCTGGggaaaaactgtgacaccaatcagacaCACCGGAGGATTGGAATTACTCACCCCTGATATAGAGCCATACCAAATGTCTCATCCCTTCAGTTCTGACCTGCATCTCTCTGCGtatactgactctctctctcaagccTTTACTGCTGGGAATGCTGGGTCCCATCATCATGCCATTCCAGGACATGGCAAGACAGAAGGAGTGAACACGAGGCGACAGCGGCCATTTTGTGGAATCTGGAGCCAAAATGGAGGCTACAGGATCATAGTTGGCTCCACTCGCATTTCTCCTCAtctttttttggcagaaataaaatggagagat
>TU2619972
gagagaggaagctcaGACAGCGAGCAGCGGAGGAAATAACGGATCTGCTTCTTCGCTGGatttctctcttctcatccttACCGACGTGGAGAACCAACCCGAGGAATACTGGTGTTTATTCAAAACGAAGAAAACGAGTCTAAATCCCCGCCGATCCCACACGTCTCAACCACAAGATTCCTGACTGACAGAGTGTGTGAGCGCTACAGTGGACTAGGGGATCAGTCTTGtggactgtgtgtttgtgagaagTCCTTTCTGCAGACATGGAGACCCATTTCCTGATGAGAGTGTTGTGAGTCCGTTGCAGCCCTGTCACGCCCACAG
>TU2620245
CCCAGGCGGGGGTGGTCCTgacggaggaggaggggagatccCCTGCAGGCGCATGCGGAGCGGCAGCTACGTCAAGGCCATGGGAGACGACGACAGTCAGGACTCTGACGCCAGTCCTAAATCCTCTCCTAAAACCACTATTATCGCCCAGAGAGAGGCCTTCAGACGCTCTGTCAGCATGGACCACAGatACTCGTGTAAGCAGTGTGTAGATGCTACGCTACCATATGCTCACAACATAAGCACGCCGAAGAGTCACGCACGCTCTCGGAGCTACACGCGGTCTCTGACCAGCTCACAGtTGGGTGACTCTCTGAATCGTCAGTTTGAGGCGGTGTGTGAGACCATGTttggagagatagagagtcagGCGGTGGAAGCCTTGGATCTGCCTGGCTGCTTCCGGACCCGTTCCCATAGTTACGTCCGCGCCATCCAGGCCGGCTGTTCCCAAGACGACGACTGCCTGTCCGTCTTCTCCATGTCAGGACCCAGCATCAAGGGAGGggttgtcatCCCATACCGTAAGGCtggccctccccctctccctccccgtATGTCTAAGCCTACGATCTCTGTGAGGGCTCAGAGCAGTACAGAGTCTACCCAGGATGCCTACTTCCAGAACACAGGCCAGCCTGCCCTGGGACGGCCCAGACAACACCAGAGCAGCTCTGTGGACCTGGGAATCACTGATGTTGCAGTGTCTGGTCAGACCTCCAGGGGATCCAGGGAAAGGGGTTGCTACACAGGACCAGGACAAGGCCGCTCCCGCCAGCACTCCAACTCTGCCGAGAGCCTGGATGGTGGCCCCCG
>TU2620246
ACAGAACAGTATGGTGCTGAGcaagatgggaggaggaggaggaagaggaggaggacaggaggagaacaagacggagagaagaggaaggaattGGAGGCCGTCTATCGCTATACAGgtggaCAGCTCGGAGACCCTGTCAGACTCAGAACCGGATGgcaaggctctgagagaggttcACTCTATAGGGGTGCAGGTGGAGGAGGACAAGAGacGTGCTCGGTTCAAGCGCTCCAACAGTGTGACGGCCAGCGTCCAGGCAGACCTGGACCCAGAGGGCGGTTACCCGGGCCTCACCTTCGCTGTTCCTACCCAGGATAAGAGCCTCCAGTTCGGCTGCTCCTTCCAGAGACACTCCTCAGAGCCAGAGTCAGCCGACCAGTACGCAGAGTACCACCGCACGGTGCACACCCAGGGCCAGTGGGCCTACAGAGAAGACTATGTCCAGGATGGTTACGCTACAGACCCCCACCAGATCCCCCC

Function

symbol description
dlgap3 Predicted to enable molecular adaptor activity. Predicted to be involved in regulation of postsynaptic neurotransmitter receptor activity. Predicted to act upstream of or within signaling. Predicted to be active in glutamatergic synapse and postsynaptic specialization. Orthologous to human DLGAP3 (DLG associated protein 3).

NR:

description
PREDICTED: disks large-associated protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036970898.1 False 4373 mRNA 0.59 13 5295809 5412625
TU2619972 False 327 lncRNA 0.51 3 5113201 5374341
TU2620245 False 816 TUCP 0.59 5 5384651 5401262
TU2620246 True 480 TUCP 0.59 4 5401428 5407508

Neighbor

gene id symbol gene type direction distance location
smim12 smim12 coding upstream 277861 5014549 ~ 5018314 (+)
pef1 pef1 coding upstream 284005 5002978 ~ 5011804 (+)
LOC118946537 NA coding upstream 2114009 3160218 ~ 3181800 (+)
angpt2b LOC106570762 coding upstream 2303721 2930144 ~ 2992088 (+)
LOC110487826 znf519 coding upstream 2409025 2883928 ~ 2886784 (+)
LOC110513117 LOC106589108 coding downstream 96376 5509001 ~ 5525069 (+)
LOC110489357 slc6a19 coding downstream 179487 5592112 ~ 5615373 (+)
slc6a18 LOC106570711 coding downstream 219672 5632297 ~ 5641547 (+)
LOC110489437 LOC106570711 coding downstream 232558 5645183 ~ 5677904 (+)
wipf3 NA coding downstream 311645 5724270 ~ 5749736 (+)
G2291049 NA non-coding upstream 9479 5285564 ~ 5286330 (+)
G2291000 NA non-coding upstream 11752 5181158 ~ 5284057 (+)
G2291025 NA non-coding upstream 80162 5213403 ~ 5215647 (+)
G2291016 NA non-coding upstream 95770 5199476 ~ 5200039 (+)
G2290994 NA non-coding upstream 124500 5170412 ~ 5171309 (+)
G2291193 NA non-coding downstream 61 5412686 ~ 5413092 (+)
G2291192 NA non-coding downstream 3551 5416176 ~ 5416762 (+)
G2291194 NA non-coding downstream 4207 5416832 ~ 5418238 (+)
G2291213 LOC106570718 non-coding downstream 40028 5452653 ~ 5466304 (+)
G2291215 NA non-coding downstream 49116 5461741 ~ 5462301 (+)
G2290455 NA other upstream 746965 4546904 ~ 4548844 (+)
G2290395 NA other upstream 846238 4448889 ~ 4449571 (+)
G2289325 NA other upstream 2235030 3060442 ~ 3060779 (+)
G2288814 NA other upstream 2914414 2380447 ~ 2381395 (+)
G2291219 NA other downstream 58938 5471563 ~ 5472153 (+)
G2291490 NA other downstream 735199 6147824 ~ 6148246 (+)
G2291498 NA other downstream 748453 6161078 ~ 6161719 (+)
G2290955 NA non-coding upstream 3343 5109571 ~ 5109858 (+)
G2290938 NA non-coding upstream 18019 5094972 ~ 5095182 (+)
G2290933 NA non-coding upstream 28109 5084836 ~ 5085092 (+)
G2290872 NA non-coding upstream 99468 5013435 ~ 5013733 (+)
G2290867 NA non-coding upstream 100543 5012224 ~ 5012658 (+)
G2291186 NA non-coding downstream 5736 5380077 ~ 5380283 (+)
G2291198 NA non-coding downstream 11024 5385365 ~ 5386056 (+)
dlgap3 dlgap3 other downstream 10310 5113201 ~ 5412625 (+)
G2291082 NA non-coding upstream 19393 5363320 ~ 5365258 (+)
G2291078 NA non-coding upstream 30258 5351310 ~ 5354393 (+)

Expression


Co-expression Network