wipf3


Basic Information

Item Value
gene id wipf3
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 5724270 ~ 5749736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971730.1
TCGAAGCGACAAGGTGTGCCCCCTTGGTGTCCCAACTTGTCAACACGGCGTGGTAAGAGATATTACGCACAAACAACCGTAGGCTAGAGAAGAGGAGAAGTCATttaacttcagaacaaacttttTTGTTGTGTTCACTAGCATACATTTAATGAGACATTTGGCTGTGTTGAATCTGTCGTTACACTCACCATTACCAGTTGAAACTTGGTGGAACTTCAAATGAACCGTTTTTATTTTTCTGGAATAGCCAACGACCAACGCCGGACTACAAACCTATCACAACATTGTTGCTGTCCCCAGGGTTGTGCTTTCCAGCTGTAGCGGACTATAGCGGTGCGCTCGTTATACGGCTTGAATCCGACGTCTGTAACTGTAGCCAATGACTGTAGTCTTTCTCCCCAATAATACTATAGTATTTGCCGGGTCAGTACCCGTGGTCAGTATCTGTCGGGTCTGTATCTGCCGGGTCAGTATCTGCCGGGTCAGTACCTGCCGAGTCAGTACCCGCGGTCAGTATCTGCCGGGTCAGTATCTACCGGGTCAGCGGCACACGCTCTGCGGGCAGAGTGCTGACGGACTTGTCGCGCCACGAACGAAATCCTCCCGGTAATACATAGGCTAGGAGTCCAGAGATTCTGTGGTCAGCCATGCctgtcccccctcctccccctccccctgcaccccctccacctccaccaccttgTACTGCTCACCCACcacagtcTCGGCCAGACCCTCCTAGTCTCCAGAGtgttggaggaagaggagggaggaacgCCCTGTTAGTAGACATTCAGAAAGGAGCCAGGTTAAAGAAGGTTTTACAGGTCCATGACCGTAGCGCACCAGTTGTCGacaAGCCCAGGGCCAGTGGTGGTCTGTCCCAGGACCATCCCCAGGGAGGATCAGGAGGAGGGGCGGAGGCTGTGAGGCCCTCTCTAGGGGGCTTGTTCTCTGGCGGGTTCCCCATCCTCAGACCCGCTGGGCAGAGAGCCTTCACAGGGAAGAACGTGGtttcaCGCTCTAGCTCATCAACGGGACTGAAGCCTCAGTGGAACCCTCCACCGACATCGTCAGACAGTGGCCACACCCCCGAGCCCTACCATAGGCCGACAGAGAGAGGAAGCCCTTCCCACCGCCCTGCCCACTCAGCCTCcgcacctccctccccctctcacagCAAACCTCCCCTCTCCATCACTgcccccaccaccactcctcctccccctcctccctcattcCATGAGCGTCCCAGCAGCAGGCCTCCCCCCATCCCTACcggtcctccccctcctccccctacccAAGTCACCAAGCCTACCTGGCTCCCCATCCAGCACCCTCACCCCTTACCCCagccctctacccctcctccctccacgtccccctcctccctccctaaccGGAACTCTGGTTTCTTCTACCCgcctcctccctcccccatcctccccccctccctcccccctcctccctcccctgtcctctcatccttcccccctcctccctcccccgtcgtctcctccctccccccatctccctcccccatcctctcctcctcccttccccctcctccctcccctgtcctctccccttcctctgaaTTGAGGTTCTCTATCTCTGGTCCCCAcggcccccctcctcctcctcctcctccacccctccccgcCTCATTCACCCCCAGCTGCccctcctctctgccccctccacCACCCAAGATGCCCCCTGTGCCGTCCCCTGCCATGCGGCCCCCGGTGCCCCCCTCCTACCCCTGCACTGCACCTAGTCGACGACCACCAGCTGTGCCCAGGAGTGCAGGTGTGGGGAGGTCGTTGGCTTCTCCCCCCGTCCCACCGGCCCGCTCCCCGTCCACGGAGCTGACCAACCGGAtccctccccctcatcctcctccccttcccccgtCCTTAATGAGGAATGGACACAGTCTAAGCTTGCACAGCCTGGATGACTTTGAGTCTAAATTTCAGTTCCACCCAATAGAAGACTTTCCCCCTCCAGAGGAGTTTTGGCCATTTCCACGCATCTACCCAAGCAGAGAGAACCAAGGAGTGATCAGGACACAGCTATGGTGATGCAGTGAGACAACAtggacccccccacccccacacacacacatccaacagCTGGCCCAACACATCCTCTTCATCCTACATtatcctcttcctctgtccccaGGGGCCATGCTCATGGAcggataatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatcttgtGGCGAATGCAATACCGTGCCACACCCAGTGCAGGCTACCGACCTCCAACCTTCTCCAGTGTGGAATGTTTTGAATGTGTCAGGAGGGTAGAACCCAACagtgttctctccctctcactatatatatatctattgataaactgggtgGCACCAGCcccgaatgctgattggctgacagccatgatatatcatgggtatgacaaaacatttattttacgttgataaacagtttataatagcagtaaggcacctctgggatttgtggtatatgaccaatataccacggctaagggctgtatccagtcaCTCCGCGTTGTGTTGTGCCAaagaacagctcttagccgtggtatattggccatataccacacctcctcgggccttaaatatatactgtatatatatgtctctctctgtctctctctgttctctctctctctctctctctctctctctctctatatatatatatatatatatattgagattcttcaaagtagccaccctttgccttgatgacagatttgcacgcTCTTGGATTTCCCTCAACcaccttcacctggaatgcttttccaacagtcttgaaggagttcccacctaTGCTGAGcgcttattggctgcttttccttcactctgtggtccaactcgtcccaaaccatctca
>TU2620425
AAGAGATATTACGCACAAACAACCGTAGGCTAGAGAAGAGGAGAAGTCATttaacttcagaacaaacttttTTGTTGTGTTCACTAGCATACATTTAATGAGACATTTGGCTGTGTTGAATCTGTCGTTACACTCACCATTACCAGTTGAAACTTGGTGGAACTTCAAATGAACCGTTTTTATTTTTCTGGAATAGCCAACGACCAACGCCGGACTACAAACCTATCACAACATTGTTGCTGTCCCCAGGGTTGTGCTTTCCAGCTGTAGCGGACTATAGCGGTGCGCTCGTTATACGGCTTGAATCCGACGTCTGTAACTGTAGCCAATGACTGTAGTCTTTCTCCCCAATAATACTATAGTATTTGCCGGGTCAGTACCCGTGGTCAGTATCTGTCGGGTCTGTATCTGCCGGGTCAGTATCTGCCGGGTCAGCGGCACACGCTCTGCGGGCAGAGTGCTGACGGACTTGTCGCGCCACGAACGAAATCCTCCCGGTAATACATAGGCTAGGAGTCCAGAGATTCTGTGGTCAGCCATGCctgtcccccctcctccccctccccctgcaccccctccacctccaccaccttgTACTGCTCACCCACcacagtcTCGGCCAGACCCTCCTAGTCTCCAGAGtgttggaggaagaggagggaggaacgCCCTGTTAGTAGACATTCAGAAAGGAGCCAGGTTAAAGAAGGTTTTACAGGTCCATGACCGTAGCGCACCAGTTGTCGacaAGCCCAGGGCCAGTGGTGGTCTGTCCCAGGACCATCCCCAGGGAGGATCAGGAGGAGGGGCGGAGGCTGTGAGGCCCTCTCTAGGGGGCTTGTTCTCTGGCGGGTTCCCCATCCTCAGACCCGCTGGGCAGAGAGCCTTCACAGGGAAGAACGTGGtttcaCGCTCTAGCTCATCAACGGGACTGAAGCCTCAGTGGAACCCTCCACCGACATCGTCAGACAGTGGCCACACCCCCGAGCCCTACCATAGGCCGACAGAGAGAGGAAGCCCTTCCCACCGCCCTGCCCACTCAGCCTCcgcacctccctccccctctcacagCAAACCTCCCCTCTCCATCACTgcccccac
>TU2620421
caaacttttTTGTTGTGTTCACTAGCATACATTTAATGAGACATTTGGCTGTGTTGAATCTGTCGTTACACTCACCATTACCAGTTGAAACTTGGTGGAACTTCAAATGAACCGTTTTTATTTTTCTGGAATAGCCAACGACCAACGCCGGACTACAAACCTATCACAACATTGTTGCTGTCCCCAGGGTTGTGCTTTCCAGCTGTAGCGGACTATAGCGGTGCGCTCGTTATACGGCTTGAATCCGACGTCTGTAACTGTAGCCAATGACTGTAGTCTTTCTCCCCAATAATACTATAGTATTTGCCGGGTCAGTACCCGTGGTCAGTATCTGTCGGGTCTGTATCTGCCGGGTCAGTATCTGCCGGGTCAGTACCTGCCGAGTCAGTACCCGCGGTCAGTATCTGCCGGGTCAGTATCTACCGGGTCAGCGGCACACGCTCTGCGGGCAGAGTGCTGACGGACTTGTCGCGCCACGAACGAAATCCTCCCGGTAATACATAGGCTAGGAGTCCAGAGATTCTGTGGTCAGCCATGCctgtcccccctcctccccctccccctgcaccccctccacctccaccaccttgTACTGCTCACCCACcacagtcTCGGCCAGACCCTCCTAGTCTCCAGAGtgttggaggaagaggagggaggaacgCCCTGTTAGTAGACATTCAGAAAGGAGCCAGGTTAAAGAAGGTTTTACAGGTCCATGACCGTAGCGCACCAGTTGTCGacaAGCCCAGGGCCAGTGGTGGTCTGTCCCAGGACCATCCCCAGGGAGGATCAGGAGGAGGGGCGGAGGCTGTGAGGCCCTCTCTAGGGGGCTTGTTCTCTGGCGGGTTCCCCATCCTCAGACCCGCTGGGCAGAGAGCCTTCACAGGGAAGAACGTGGtttcaCGCTCTAGCTCATCAACGGGACTGAAGCCTCAGTGGAACCCTCCACCGACATCGTCAGACAGTGGCCACACCCCCGAGCCCTACCATAGGCCGACAGAGAGAGGAAGCCCTTCCCACCGCCCTGCCCACTCAGCCTCcgcacctccctccccctctcacagCAAACCTCCCCTCTCCATCACTgcccccac
>TU2620437
cctcctctctgccccctccacCACCCAAGATGCCCCCTGTGCCGTCCCCTGCCATGCGGCCCCCGGTGCCCCCCTCCTACCCCTGCACTGCACCTAGTCGACGACCACCAGCTGTGCCCAGGAGTGCAGGTGTGGGGAGGTCGTTGGCTTCTCCCCCCGTCCCACCGGCCCGCTCCCCGTCCACGGAGCTGACCAACCGGAtccctccccctcatcctcctccccttcccccgtCCTTAATGAGGAATGGACACAGTCTAAGCTTGCACAGCCTGGATGACTTTGAGTCTAAATTTCAGTTCCACCCAATAGAAGACTTTCCCCCTCCAGAGGAGTTTTGGCCATTTCCACGCATCTACCCAAGCAGAGAGAACCAAGGAGTGATCAGGACACAGCTATGGTGATGCAGTGAGACAACAtggacccccccacccccacacacacacatccaacagCTGGCCCAACACATCCTCTTCATCCTACATtatcctcttcctctgtccccaGGGGCCATGCTCATGGAcggataatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgatcttgtGGCGAATGCAATACCGTGCCACACCCAGTGCAGGCTACCGACCTCCAACCTTCTCCAGTGTGGAATGTTTTGAATGTGTCAGGAGGGTAGAACCCAACagtgttctctccctctcactatatatatatctattgataaactgggtgGCACCAGCcccgaatgctgattggctgacagccatgatatatcatgggtatgacaaaacatttattttacgttgataaacagtttataatagcagtaaggcacctctgggatttgtggtatatgaccaatataccacggctaagggctgtatccagtcaCTCCGCGTTGTGTTGTGCCAaagaacagctcttagccgtggtatattggccatataccacacctcctcgggcctta

Function

NR:

description
WAS/WASL-interacting protein family member 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971730.1 False 2985 mRNA 0.56 8 5724270 5749736
TU2620425 False 1101 TUCP 0.55 6 5724324 5738945
TU2620421 False 1097 TUCP 0.56 5 5724386 5738945
TU2620437 True 1018 TUCP 0.54 4 5739422 5749458

Neighbor

gene id symbol gene type direction distance location
LOC110489437 LOC106570711 coding upstream 46366 5645183 ~ 5677904 (+)
slc6a18 LOC106570711 coding upstream 82723 5632297 ~ 5641547 (+)
LOC110489357 slc6a19 coding upstream 108897 5592112 ~ 5615373 (+)
LOC110513117 LOC106589108 coding upstream 199201 5509001 ~ 5525069 (+)
dlgap3 dlgap3 coding upstream 311645 5113201 ~ 5412625 (+)
LOC110489352 LOC106570724 coding downstream 69344 5819080 ~ 5856740 (+)
LOC110520219 NA coding downstream 296854 6046590 ~ 6047475 (+)
LOC110487836 LOC106570725 coding downstream 360643 6110379 ~ 6203899 (+)
LOC118946494 NA coding downstream 644579 6394261 ~ 6398382 (+)
LOC110487847 LOC106570705 coding downstream 901728 6651464 ~ 6676974 (+)
G2291321 NA non-coding upstream 4231 5719807 ~ 5720039 (+)
G2291313 NA non-coding upstream 23653 5700013 ~ 5700617 (+)
G2291312 NA non-coding upstream 24596 5698936 ~ 5699674 (+)
G2291311 NA non-coding upstream 26492 5697520 ~ 5697778 (+)
G2291286 NA non-coding upstream 95045 5628628 ~ 5629225 (+)
G2291338 LOC100286654 non-coding downstream 24114 5773850 ~ 5779668 (+)
G2291341 NA non-coding downstream 34429 5784165 ~ 5784756 (+)
G2291359 NA non-coding downstream 117866 5867602 ~ 5872088 (+)
G2291358 NA non-coding downstream 124090 5873826 ~ 5876241 (+)
G2291388 NA non-coding downstream 152211 5901947 ~ 5909243 (+)
G2291219 NA other upstream 252117 5471563 ~ 5472153 (+)
G2291194 NA other upstream 306032 5416832 ~ 5418238 (+)
smim12 smim12 other upstream 705956 5014549 ~ 5018314 (+)
G2290455 NA other upstream 1175426 4546904 ~ 4548844 (+)
G2291490 NA other downstream 398088 6147824 ~ 6148246 (+)
G2291498 NA other downstream 411342 6161078 ~ 6161719 (+)
G2291541 NA other downstream 558400 6308136 ~ 6316697 (+)
G2292347 NA other downstream 1132641 6882377 ~ 6883166 (+)
G2292666 NA other downstream 1440516 7190252 ~ 7190850 (+)

Expression


Co-expression Network