LOC110520219


Basic Information

Item Value
gene id LOC110520219
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 6046590 ~ 6047475 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041384.1
TACATAAAGAGAATACTTCAAAATGAGAAGGTCCTGCCATGGAAAAGATGACTGGGTGGACATAAAGTGGAAAGGAGGGGAAATAACTCCCAGCATGCAGCAGGACACCTTCAGCTGCGGGGTCTTTGTAATGCAGAGTTCCACAAAGCCAACAACCGCTTCATGTGTGCCACTGATAAAGAACCTGGATGTGGCCCAAAGACTGACTGGATTGAATGTTTTGCATGCCAATGGTGGTTCCATGTGCTGTGCCTAGGAATGAAGACAAGTTCAACAGAGTAAAGAACACAAACAGGAAGTGCAGTCTTTGTTGTTGGAGAATGTATGCATTaccccatccacactgaagaggctctgaCATGTACaacaaccagggataaagagaaagTTAACACGGTGAAATGTTTCATATTTAATTAAACTTAAGTGTCTGACATGTTGGGAAAGATtaaaggtctacaatttgtttaatttgtcaatatta

Function

NR:

description
uncharacterized protein LOC110503783

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041384.1 True 484 mRNA 0.42 3 6046590 6047475

Neighbor

gene id symbol gene type direction distance location
LOC110489352 LOC106570724 coding upstream 189850 5819080 ~ 5856740 (+)
wipf3 NA coding upstream 296854 5724270 ~ 5749736 (+)
LOC110489437 LOC106570711 coding upstream 368686 5645183 ~ 5677904 (+)
slc6a18 LOC106570711 coding upstream 405043 5632297 ~ 5641547 (+)
LOC110489357 slc6a19 coding upstream 431217 5592112 ~ 5615373 (+)
LOC110487836 LOC106570725 coding downstream 62904 6110379 ~ 6203899 (+)
LOC118946494 NA coding downstream 346840 6394261 ~ 6398382 (+)
LOC110487847 LOC106570705 coding downstream 603989 6651464 ~ 6676974 (+)
LOC110489360 LOC105005722 coding downstream 755558 6803033 ~ 6867523 (+)
LOC110487851 LOC106570704 coding downstream 869514 6916989 ~ 6943817 (+)
G2291452 NA non-coding upstream 712 6044214 ~ 6045878 (+)
G2291449 NA non-coding upstream 6016 6036648 ~ 6040574 (+)
G2291430 NA non-coding upstream 49214 5991397 ~ 5997376 (+)
G2291428 NA non-coding upstream 57821 5987148 ~ 5988769 (+)
G2291420 NA non-coding upstream 65907 5978396 ~ 5980683 (+)
G2291476 NA non-coding downstream 69330 6116805 ~ 6244236 (+)
G2291480 NA non-coding downstream 76668 6124143 ~ 6124536 (+)
G2291498 NA non-coding downstream 113603 6161078 ~ 6161719 (+)
G2291518 NA non-coding downstream 179051 6226526 ~ 6227781 (+)
G2291219 NA other upstream 574437 5471563 ~ 5472153 (+)
G2291194 NA other upstream 628352 5416832 ~ 5418238 (+)
dlgap3 dlgap3 other upstream 639082 5113201 ~ 5412625 (+)
smim12 smim12 other upstream 1028276 5014549 ~ 5018314 (+)
G2291490 NA other downstream 100349 6147824 ~ 6148246 (+)
G2291541 NA other downstream 260661 6308136 ~ 6316697 (+)
G2292347 NA other downstream 834902 6882377 ~ 6883166 (+)
G2292666 NA other downstream 1142777 7190252 ~ 7190850 (+)

Expression


Co-expression Network