Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118946539 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 9324340 ~ 9325002 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036971827.1 | True | 663 | mRNA | 0.71 | 1 | 9324340 | 9325002 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489366 | LOC105012323 | coding | upstream | 161844 | 9046596 ~ 9162941 (+) |
| LOC110487879 | LOC106570673 | coding | upstream | 304871 | 9005647 ~ 9019469 (+) |
| stx12 | LOC106570663 | coding | upstream | 369390 | 8942998 ~ 8954950 (+) |
| LOC110487875 | LOC106570662 | coding | upstream | 381863 | 8934130 ~ 8942477 (+) |
| LOC110489365 | LOC106570660 | coding | upstream | 390311 | 8907450 ~ 8934029 (+) |
| trnap-agg-161 | NA | coding | downstream | 28815 | 9353817 ~ 9353888 (+) |
| trnap-agg-163 | NA | coding | downstream | 32089 | 9357091 ~ 9357162 (+) |
| trnap-agg-165 | NA | coding | downstream | 38047 | 9363049 ~ 9363120 (+) |
| trnap-agg-167 | NA | coding | downstream | 41321 | 9366323 ~ 9366394 (+) |
| trnap-agg-170 | NA | coding | downstream | 50543 | 9375545 ~ 9375616 (+) |
| G2294421 | NA | non-coding | upstream | 56288 | 9266756 ~ 9268052 (+) |
| G2294412 | NA | non-coding | upstream | 72588 | 9251547 ~ 9251752 (+) |
| G2294410 | NA | non-coding | upstream | 73055 | 9251070 ~ 9251285 (+) |
| G2294083 | NA | non-coding | upstream | 166311 | 9108619 ~ 9158029 (+) |
| G2294448 | NA | non-coding | downstream | 2448 | 9327450 ~ 9328654 (+) |
| G2294449 | NA | non-coding | downstream | 5257 | 9330259 ~ 9330708 (+) |
| G2294457 | NA | non-coding | downstream | 19759 | 9344761 ~ 9345078 (+) |
| G2294458 | NA | non-coding | downstream | 21816 | 9346818 ~ 9347314 (+) |
| trnap-agg-172 | NA | non-coding | downstream | 53907 | 9378892 ~ 9379108 (+) |
| G2294081 | NA | other | upstream | 221154 | 9094792 ~ 9103186 (+) |
| G2293943 | LOC106570655 | other | upstream | 477088 | 8844013 ~ 8847252 (+) |
| G2293942 | NA | other | upstream | 528838 | 8791101 ~ 8876464 (+) |
| G2293829 | NA | other | upstream | 812599 | 8510872 ~ 8511770 (+) |
| G2293677 | NA | other | upstream | 973657 | 8350213 ~ 8350683 (+) |
| G2294452 | LOC106570648 | other | downstream | 10333 | 9335335 ~ 9337755 (+) |
| G2294925 | NA | other | downstream | 805114 | 10130116 ~ 10131651 (+) |
| LOC118946540 | NA | other | downstream | 993850 | 10318805 ~ 10323588 (+) |
| LOC110487904 | snrpd1 | other | downstream | 1189952 | 10509464 ~ 10521398 (+) |
| G2296150 | LOC106570575 | other | downstream | 1960491 | 11285493 ~ 11290303 (+) |
