trnap-agg-161


Basic Information

Item Value
gene id trnap-agg-161
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9353817 ~ 9353888 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-161
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-161 True 72 mRNA 0.61 1 9353817 9353888

Neighbor

gene id symbol gene type direction distance location
LOC118946539 NA coding upstream 28815 9324340 ~ 9325002 (+)
LOC110489366 LOC105012323 coding upstream 191321 9046596 ~ 9162941 (+)
LOC110487879 LOC106570673 coding upstream 334348 9005647 ~ 9019469 (+)
stx12 LOC106570663 coding upstream 398867 8942998 ~ 8954950 (+)
LOC110487875 LOC106570662 coding upstream 411340 8934130 ~ 8942477 (+)
trnap-agg-163 NA coding downstream 3203 9357091 ~ 9357162 (+)
trnap-agg-165 NA coding downstream 9161 9363049 ~ 9363120 (+)
trnap-agg-167 NA coding downstream 12435 9366323 ~ 9366394 (+)
trnap-agg-170 NA coding downstream 21657 9375545 ~ 9375616 (+)
trnap-agg-172 NA coding downstream 25004 9378892 ~ 9379108 (+)
G2294458 NA non-coding upstream 6503 9346818 ~ 9347314 (+)
G2294457 NA non-coding upstream 8739 9344761 ~ 9345078 (+)
G2294449 NA non-coding upstream 23109 9330259 ~ 9330708 (+)
G2294448 NA non-coding upstream 25163 9327450 ~ 9328654 (+)
G2294421 NA non-coding upstream 85765 9266756 ~ 9268052 (+)
G2294462 NA non-coding downstream 26966 9380854 ~ 9381293 (+)
G2294472 NA non-coding downstream 55954 9409842 ~ 9410070 (+)
G2294440 NA non-coding downstream 80160 9434048 ~ 9435450 (+)
G2294479 NA non-coding downstream 82558 9436446 ~ 9436764 (+)
G2294452 LOC106570648 other upstream 16062 9335335 ~ 9337755 (+)
G2294081 NA other upstream 250631 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 506565 8844013 ~ 8847252 (+)
G2293942 NA other upstream 558315 8791101 ~ 8876464 (+)
G2293829 NA other upstream 842076 8510872 ~ 8511770 (+)
G2294925 NA other downstream 776228 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 964964 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1161066 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1931605 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2209659 11563547 ~ 11564590 (+)

Expression


Co-expression Network