trnap-agg-170


Basic Information

Item Value
gene id trnap-agg-170
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9375545 ~ 9375616 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-170
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-170 True 72 mRNA 0.61 1 9375545 9375616

Neighbor

gene id symbol gene type direction distance location
trnap-agg-167 NA coding upstream 9151 9366323 ~ 9366394 (+)
trnap-agg-165 NA coding upstream 12425 9363049 ~ 9363120 (+)
trnap-agg-163 NA coding upstream 18383 9357091 ~ 9357162 (+)
trnap-agg-161 NA coding upstream 21657 9353817 ~ 9353888 (+)
LOC118946539 NA coding upstream 50543 9324340 ~ 9325002 (+)
trnap-agg-172 NA coding downstream 3276 9378892 ~ 9379108 (+)
LOC110487882 LOC106570647 coding downstream 7111 9382727 ~ 9386344 (+)
LOC110487883 LOC106570652 coding downstream 34697 9410313 ~ 9429688 (+)
LOC110489367 LOC106570646 coding downstream 114178 9489794 ~ 9532662 (+)
cck-t cck-t coding downstream 192436 9568052 ~ 9573780 (+)
G2294458 NA non-coding upstream 28231 9346818 ~ 9347314 (+)
G2294457 NA non-coding upstream 30467 9344761 ~ 9345078 (+)
G2294449 NA non-coding upstream 44837 9330259 ~ 9330708 (+)
G2294448 NA non-coding upstream 46891 9327450 ~ 9328654 (+)
G2294421 NA non-coding upstream 107493 9266756 ~ 9268052 (+)
G2294462 NA non-coding downstream 5238 9380854 ~ 9381293 (+)
G2294472 NA non-coding downstream 34226 9409842 ~ 9410070 (+)
G2294440 NA non-coding downstream 58432 9434048 ~ 9435450 (+)
G2294479 NA non-coding downstream 60830 9436446 ~ 9436764 (+)
G2294452 LOC106570648 other upstream 37790 9335335 ~ 9337755 (+)
G2294081 NA other upstream 272359 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 528293 8844013 ~ 8847252 (+)
G2293942 NA other upstream 580043 8791101 ~ 8876464 (+)
G2293829 NA other upstream 863804 8510872 ~ 8511770 (+)
G2294925 NA other downstream 754500 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 943236 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1139338 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1909877 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2187931 11563547 ~ 11564590 (+)

Expression


Co-expression Network