LOC110487883 (LOC106570652)


Basic Information

Item Value
gene id LOC110487883
gene name LOC106570652
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9410313 ~ 9429688 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971569.1
ACCAATTACCACTCCTACTTAGTTTCTCTGCATGGATGACAGACGATCACCACAGTTCACTGTGAGGAGGATGGCGGAGGAGCTGCATCCAGCCGAGCACTGGTACAGGTGTATCTCCAGTTGGCTTCCATCTTGGtgccccacctccctctctcagctaAAGGATGCAGAGGACAAAATGCTCAaggctgtGAAGACCCAATTCTCCAGGCAAGATGTCCCGATATCCAATGGCAACTATGTCTGGACCATAGCATTCAACGCCAAAGGATATCCCTCACTCCCCCCCCAGCCCCAGTCTAAGCCCCAGCCTCATCCCTCTTCTCCCCAGCCCTCTCTCCAGCGCTGCCCCCGTCCTCCGCTAGTGCTGCTCCATGGGTTTGGGGGTGGTGTGGGTCTGTGGGCTCAGAACCTGGACTCTTTGTGTGGCAGTGGAGCCGTGTATGCCCTGGATCTGCTGGGGTTCGGTCGTAGCAGCAGGCCCCTGTTCAGCGTGGACCCCAAGGGGGCAGAGGAGCAGTTCATAGGGGccctggaggagtggagagacagggtggGCCTGGAGGAaatgatcctgctgggacacaaCCTGGGAGGATACCTGGCTGCTGCTTACACACTTAAACACCCACACAGggtGAAACACCTGATCCTGGTGGAGCCATGGGGGTTCCCGGCCCGCCCAGAGAGCATGGATCAGGAGAAGTCTATCCCAGTGTGGATCAGAGCCATGGGGGTCGTCATGAGTCCCTTcaacctcctggctacactaagACTGGCTGGACCACTGGGTCCGATGTTGGTCCAGACCATCAGGTCAGATTTTAAACAGAAGTACTCTTCAGTGTTTGATGACAACACTGTATCAGACTACATCTACCATCTCAATGCACAGACACCCAGTGGTGAAGCAGCATTTAAGAACATGACGGTACCATATGGCTGGGCTAAGAGACCGATGCTGGATCGTATCGTACACATCCGACCCGACATTCCCATATCCATCATCTATGGATCCCGATCCAGCATCGACAGTGACTCGGGATACACTCTCCAGAAAACCAGACTGGATGTGGACATCATGgtgataAGGGGAGGAGGTCACTATGTATTTGCTGACCAGCCAGATGACTTCAATCAGAACATTCTTCACATCCTAGCCAGGATGGACGGAGtgaaggatgagaggagggagagaaggatgagaggagggagagaaggatgagaggagggagagaaggatgagaggagggagagaaggatgag

Function

NR:

description
PREDICTED: 1-acylglycerol-3-phosphate O-acyltransferase ABHD5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971569.1 True 1266 mRNA 0.55 7 9410313 9429688

Neighbor

gene id symbol gene type direction distance location
LOC110487882 LOC106570647 coding upstream 23969 9382727 ~ 9386344 (+)
trnap-agg-172 NA coding upstream 31350 9378892 ~ 9379108 (+)
trnap-agg-170 NA coding upstream 34697 9375545 ~ 9375616 (+)
trnap-agg-167 NA coding upstream 43919 9366323 ~ 9366394 (+)
trnap-agg-165 NA coding upstream 47193 9363049 ~ 9363120 (+)
LOC110489367 LOC106570646 coding downstream 60106 9489794 ~ 9532662 (+)
cck-t cck-t coding downstream 138364 9568052 ~ 9573780 (+)
LOC110487884 LOC106570642 coding downstream 192339 9622027 ~ 9624695 (+)
LOC110487893 LOC106570636 coding downstream 619508 10049196 ~ 10064026 (+)
LOC118946535 NA coding downstream 661615 10091303 ~ 10092528 (+)
G2294472 NA non-coding upstream 243 9409842 ~ 9410070 (+)
G2294462 NA non-coding upstream 29020 9380854 ~ 9381293 (+)
G2294458 NA non-coding upstream 62999 9346818 ~ 9347314 (+)
G2294457 NA non-coding upstream 65235 9344761 ~ 9345078 (+)
G2294440 NA non-coding downstream 4360 9434048 ~ 9435450 (+)
G2294479 NA non-coding downstream 6758 9436446 ~ 9436764 (+)
G2294480 NA non-coding downstream 7742 9437430 ~ 9438504 (+)
G2294484 NA non-coding downstream 27220 9456908 ~ 9457147 (+)
G2294485 NA non-coding downstream 27716 9457404 ~ 9457615 (+)
G2294452 LOC106570648 other upstream 72558 9335335 ~ 9337755 (+)
G2294081 NA other upstream 307127 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 563061 8844013 ~ 8847252 (+)
G2293942 NA other upstream 614811 8791101 ~ 8876464 (+)
G2293829 NA other upstream 898572 8510872 ~ 8511770 (+)
G2294925 NA other downstream 700428 10130116 ~ 10131651 (+)
LOC118946540 NA other downstream 889164 10318805 ~ 10323588 (+)
LOC110487904 snrpd1 other downstream 1085266 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1855805 11285493 ~ 11290303 (+)
G2296278 NA other downstream 2133859 11563547 ~ 11564590 (+)

Expression


Co-expression Network