LOC118946506


Basic Information

Item Value
gene id LOC118946506
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 9580455 ~ 9582402 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971587.1
CAGGCAGGAAAGCTTCCAACCAGTCTTTTTGTTTGGAAGCTTTACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGGTCATACTGTCTGGGTTCATGGTGTATCACTGGTCATACTGTCTGGGTTCATGTTGTATCACTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGGTCATACTGTCTGGGTTCATGGTGTATCACTGGTCATACTGTCTGGGTTCATGTTGTATCACTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCACACTGTCTGGGTTCATGTTGTATCACTGTGGTCACACTGTCTGGGTTCATGTTGTATCACTGTGGTCACACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACTGTGGTCATACTGTCTGGGTTCATGTTGTATCACTGTGGTCATACTGTCTGGGTTCATGGTGTATCACACTCACTAGCTCTTACATTGACGTATGTAAATATGTTATTCATTCATTAAATTCTTTTGATTGAATATTCAAACCTCGTATTATTCCCAAGATTTCACACATTGCGGTATATGACTTTCTTAATGGATTCTCATTTGTACTGGAACACTCATTTAGCACAAAGTTAAAACAGGTGTTCTGTGGTTATAGAGTTGTAGTTCTGTGGTTATAGAGTTGTAGTTCTGTGGTTATAGAGTTGTGGTTATAGAGTTGTAGTTCTGTGGTTAAACAGTTGTTTGTAACAGTTGTTTGGAAAGCTTAGCCAACCCCTTCTCCTGATAATGATTAATTACTGGGAGATATTGCTCCAGCCAAACTATTAACACACCTGCTTGTAAAAAGCATGGTCCTGGTGAGCAGCTGATTGGTTGAATAACTTGTGTTAGAGCAGGGCTAGAGCTAAAGCCTGCACACCACTACCAGCAGATGGCCCTGTTGGACAGCTGATTTCAGAGTCTGttttcagaacacacacacacacacacacacagagataatgTTTCTACTCTCCTTCAGTATTGTAACCGctgacagacagatggaggaTGATTGGTGGATAATTGAGAAATAAACAGGAACATTTCCATCatca

Function

NR:

description
PREDICTED: mucin-5AC-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971587.1 True 1914 mRNA 0.43 2 9580455 9582402

Neighbor

gene id symbol gene type direction distance location
trnap-agg-171 NA coding downstream 202047 9378337 ~ 9378408 (-)
trnap-agg-169 NA coding downstream 205394 9374990 ~ 9375061 (-)
trnap-agg-168 NA coding downstream 211341 9369043 ~ 9369114 (-)
trnap-agg-166 NA coding downstream 214616 9365768 ~ 9365839 (-)
trnap-agg-164 NA coding downstream 217890 9362494 ~ 9362565 (-)
LOC110489368 sytl1 coding upstream 57 9582459 ~ 9592709 (-)
cd164l2 LOC106570641 coding upstream 30583 9612985 ~ 9618038 (-)
LOC118946483 LOC106570637 coding upstream 45288 9627690 ~ 9638858 (-)
LOC118946502 NA coding upstream 82018 9664420 ~ 9667323 (-)
LOC110487885 LOC106570639 coding upstream 85063 9667465 ~ 9705713 (-)
G2295196 NA non-coding downstream 25247 9550342 ~ 9555208 (-)
G2295190 NA non-coding downstream 39840 9539439 ~ 9540615 (-)
G2295179 NA non-coding downstream 56220 9523719 ~ 9524235 (-)
G2295178 NA non-coding downstream 56788 9522930 ~ 9523667 (-)
G2294571 NA non-coding downstream 129727 9450450 ~ 9450728 (-)
G2295225 NA non-coding upstream 36611 9619013 ~ 9619320 (-)
G2295227 NA non-coding upstream 39600 9622002 ~ 9622457 (-)
G2295228 LOC106570642 non-coding upstream 40748 9623150 ~ 9624666 (-)
G2295338 NA non-coding upstream 197529 9779931 ~ 9780233 (-)
G2294565 NA other downstream 136715 9443280 ~ 9443740 (-)
G2294557 NA other downstream 149961 9429508 ~ 9430494 (-)
LOC110487880 LOC106570649 other downstream 247363 9313642 ~ 9333092 (-)
G2294317 NA other downstream 553626 9025265 ~ 9026829 (-)
G2294128 NA other downstream 1032353 8547565 ~ 8548102 (-)
LOC110487895 LOC106570596 other upstream 439753 10014678 ~ 10038693 (-)
LOC110489370 clasp2 other upstream 623128 10205530 ~ 10316136 (-)
G2295895 NA other upstream 1205705 10788107 ~ 10788559 (-)
LOC110487919 LOC106570575 other upstream 1704467 11274255 ~ 11455993 (-)

Expression


Co-expression Network