LOC118946535


Basic Information

Item Value
gene id LOC118946535
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 10091303 ~ 10092528 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041414.1
cagaggtgtctgtttaaactactggcacacagctcagtccTCCATGCAAacccaacaagacatgttaccagaggtgtctgttttaaCTACTGACACACAGCTCAGTCCTCCATGCAAacccaacaagacatgttaccagaggtgtctgtttaaactactggcacacagctcagtccTCCATGCAAACCcatcaagacatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041414.1 True 200 mRNA 0.47 3 10091303 10092528

Neighbor

gene id symbol gene type direction distance location
LOC110487893 LOC106570636 coding upstream 27277 10049196 ~ 10064026 (+)
LOC110487884 LOC106570642 coding upstream 466608 9622027 ~ 9624695 (+)
cck-t cck-t coding upstream 517523 9568052 ~ 9573780 (+)
LOC110489367 LOC106570646 coding upstream 558641 9489794 ~ 9532662 (+)
LOC110487883 LOC106570652 coding upstream 661615 9410313 ~ 9429688 (+)
LOC118946540 NA coding downstream 229505 10318805 ~ 10323588 (+)
LOC110513484 LOC106570612 coding downstream 311844 10404372 ~ 10427604 (+)
si:ch211-199g17.9 syce1 coding downstream 345149 10437677 ~ 10441669 (+)
LOC110489372 LOC106570609 coding downstream 373837 10466365 ~ 10490055 (+)
LOC110489373 LOC106570620 coding downstream 414565 10507093 ~ 10509282 (+)
G2294893 NA non-coding upstream 71799 10018654 ~ 10019504 (+)
G2294889 NA non-coding upstream 79891 10011115 ~ 10011412 (+)
G2294888 NA non-coding upstream 84188 10006890 ~ 10007115 (+)
G2294887 NA non-coding upstream 84556 10006541 ~ 10006747 (+)
G2294813 NA non-coding upstream 103010 9983160 ~ 9988293 (+)
G2294922 NA non-coding downstream 31096 10123624 ~ 10123842 (+)
G2294923 NA non-coding downstream 31527 10124055 ~ 10124316 (+)
G2294925 NA non-coding downstream 38305 10130116 ~ 10131651 (+)
G2294931 NA non-coding downstream 45492 10138020 ~ 10167492 (+)
G2294941 NA non-coding downstream 78008 10170536 ~ 10185915 (+)
G2294452 LOC106570648 other upstream 753548 9335335 ~ 9337755 (+)
G2294081 NA other upstream 988117 9094792 ~ 9103186 (+)
G2293943 LOC106570655 other upstream 1244051 8844013 ~ 8847252 (+)
G2293942 NA other upstream 1295801 8791101 ~ 8876464 (+)
G2293829 NA other upstream 1579562 8510872 ~ 8511770 (+)
LOC110487904 snrpd1 other downstream 422426 10509464 ~ 10521398 (+)
G2296150 LOC106570575 other downstream 1192965 11285493 ~ 11290303 (+)
G2296278 NA other downstream 1471019 11563547 ~ 11564590 (+)

Expression


Co-expression Network