Gene
RNA
| Item | Value |
|---|---|
| gene id | il6 |
| gene name | il-6 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11002048 ~ 11004436 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0006953 | acute-phase response | biological_process |
| GO:0006955 | immune response | biological_process |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005125 | cytokine activity | molecular_function |
| GO:0005138 | interleukin-6 receptor binding | molecular_function |
| GO:0008083 | growth factor activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001124657.1 | True | 1170 | mRNA | 0.46 | 5 | 11002048 | 11004436 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489377 | LOC106588728 | coding | upstream | 192649 | 10759051 ~ 10809399 (+) |
| polr1f | twistnb | coding | upstream | 326448 | 10670248 ~ 10675600 (+) |
| LOC110487909 | LOC106570592 | coding | upstream | 332996 | 10666690 ~ 10669052 (+) |
| btd | LOC106570600 | coding | upstream | 415611 | 10578406 ~ 10586437 (+) |
| LOC110487905 | LOC106570604 | coding | upstream | 433318 | 10541656 ~ 10568730 (+) |
| LOC110487935 | LOC106570554 | coding | downstream | 188614 | 11193050 ~ 11234468 (+) |
| LOC118946500 | LOC106570575 | coding | downstream | 259096 | 11262547 ~ 11278404 (+) |
| LOC110487925 | LOC106570566 | coding | downstream | 548913 | 11553349 ~ 11656524 (+) |
| LOC110487927 | LOC106588816 | coding | downstream | 659564 | 11664000 ~ 11742813 (+) |
| LOC110487931 | LOC106570561 | coding | downstream | 810671 | 11815107 ~ 11841142 (+) |
| G2295799 | NA | non-coding | upstream | 45683 | 10956157 ~ 10956365 (+) |
| G2295733 | NA | non-coding | upstream | 94032 | 10831970 ~ 10908016 (+) |
| G2295760 | NA | non-coding | upstream | 102123 | 10891529 ~ 10899925 (+) |
| G2295704 | NA | non-coding | upstream | 110967 | 10834355 ~ 10891081 (+) |
| G2295759 | LOC106570585 | non-coding | upstream | 112518 | 10889077 ~ 10889530 (+) |
| G2295813 | LOC106570580 | non-coding | downstream | 4739 | 11009175 ~ 11012661 (+) |
| G2295826 | NA | non-coding | downstream | 13007 | 11017443 ~ 11060069 (+) |
| G2295849 | NA | non-coding | downstream | 44085 | 11048521 ~ 11049277 (+) |
| G2295859 | NA | non-coding | downstream | 54977 | 11059413 ~ 11079190 (+) |
| G2295866 | NA | non-coding | downstream | 63848 | 11068284 ~ 11090111 (+) |
| LOC110487904 | snrpd1 | other | upstream | 480741 | 10509464 ~ 10521398 (+) |
| LOC118946540 | NA | other | upstream | 678460 | 10318805 ~ 10323588 (+) |
| G2294925 | NA | other | upstream | 870397 | 10130116 ~ 10131651 (+) |
| G2294452 | LOC106570648 | other | upstream | 1664293 | 9335335 ~ 9337755 (+) |
| G2294081 | NA | other | upstream | 1898862 | 9094792 ~ 9103186 (+) |
| G2296150 | LOC106570575 | other | downstream | 281057 | 11285493 ~ 11290303 (+) |
| G2296278 | NA | other | downstream | 559111 | 11563547 ~ 11564590 (+) |
| LOC110487932 | LOC106570557 | other | downstream | 902271 | 11906205 ~ 11910366 (+) |
| G2296450 | NA | other | downstream | 910760 | 11915196 ~ 11977297 (+) |
| G2298390 | NA | other | downstream | 2625626 | 13630062 ~ 13630795 (+) |
