XLOC_004165 (CR847934.1)



Basic Information


Item Value
gene id XLOC_004165
gene name CR847934.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 26748292 ~ 26748429 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00007960
GTCTGTAACCATGATGGTGTTTTGTAGTTGTGTAAAAGACACTGAGCACACTGCTCTGCTCCCACcaaactaagcagggctgcgcccggtcagtatctggatgggagaccacatgggaaagctaggatgttgccggaa

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083954

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00007960 True 138 rRNA 0.51 1 26748292 26748429

Neighbor


gene id symbol gene type direction distance location
XLOC_004163 acad9 coding downstream 46681 26685982 ~ 26701611 (-)
XLOC_004162 efcc1 coding downstream 81665 26619133 ~ 26666627 (-)
XLOC_004161 st3gal8 coding downstream 157863 26568492 ~ 26590429 (-)
XLOC_004160 utp3 coding downstream 372717 26370381 ~ 26375575 (-)
XLOC_004159 foxj3 coding downstream 385958 26228918 ~ 26362334 (-)
XLOC_004166 wnt7aa coding upstream 738155 27486584 ~ 27501027 (-)
XLOC_004167 NA coding upstream 753776 27502205 ~ 27507973 (-)
XLOC_004168 ptpdc1a coding upstream 762848 27511277 ~ 27537661 (-)
XLOC_004169 NA coding upstream 795149 27543578 ~ 27625465 (-)
XLOC_004170 phf2 coding upstream 896095 27644524 ~ 27702835 (-)
XLOC_004063 CR854846.1 misc downstream 10620614 16127382 ~ 16127678 (-)
XLOC_004019 CR450764.8 misc downstream 14056601 12691395 ~ 12691691 (-)
XLOC_004015 CR450764.4 misc downstream 14126525 12621518 ~ 12621767 (-)
XLOC_004013 CABZ01022569.1 misc downstream 14156996 12590999 ~ 12591296 (-)
XLOC_004008 BX000700.19 misc downstream 14235030 12512966 ~ 12513262 (-)
XLOC_004152 CR933820.1 non-coding downstream 1078337 25669839 ~ 25669955 (-)
XLOC_004150 NA non-coding downstream 1271312 25475305 ~ 25476980 (-)
XLOC_004147 NA non-coding downstream 1339396 25368112 ~ 25408896 (-)
XLOC_004144 dre-mir-499 non-coding downstream 1543049 25205153 ~ 25205243 (-)
XLOC_004142 CR628365.2 non-coding downstream 1780405 24967771 ~ 24967887 (-)
XLOC_004173 BX601648.1 non-coding upstream 1035329 27783758 ~ 27806767 (-)
XLOC_004174 NA non-coding upstream 1052430 27800859 ~ 27809715 (-)
XLOC_004180 NA non-coding upstream 1448528 28196957 ~ 28200504 (-)

Expression



Co-expression Network