Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489380 |
| gene name | LOC106570560 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 11983291 ~ 12112461 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein FAM65B-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036970833.1 | False | 5745 | mRNA | 0.53 | 24 | 11983291 | 12112461 |
| XM_036970835.1 | False | 5718 | mRNA | 0.53 | 25 | 11983291 | 12112461 |
| XM_036970832.1 | False | 5747 | mRNA | 0.53 | 24 | 11983292 | 12112461 |
| XM_036970834.1 | False | 5735 | mRNA | 0.53 | 24 | 11983292 | 12112461 |
| XM_036970837.1 | False | 5509 | mRNA | 0.52 | 23 | 11983293 | 12112461 |
| XM_036970838.1 | False | 5497 | mRNA | 0.52 | 23 | 11983293 | 12112461 |
| XM_036970836.1 | True | 5684 | mRNA | 0.52 | 24 | 12038561 | 12112461 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487934 | LOC106570559 | coding | upstream | 24212 | 11931558 ~ 11959079 (+) |
| LOC110487932 | LOC106570557 | coding | upstream | 73660 | 11906205 ~ 11910366 (+) |
| LOC110487931 | LOC106570561 | coding | upstream | 142149 | 11815107 ~ 11841142 (+) |
| LOC110487927 | LOC106588816 | coding | upstream | 240478 | 11664000 ~ 11742813 (+) |
| LOC110487925 | LOC106570566 | coding | upstream | 326767 | 11553349 ~ 11656524 (+) |
| LOC110487924 | LOC106570549 | coding | downstream | 34217 | 12146678 ~ 12153737 (+) |
| col8a2 | LOC106570550 | coding | downstream | 210410 | 12322871 ~ 12414149 (+) |
| LOC110487937 | LOC106588828 | coding | downstream | 312582 | 12425043 ~ 12472248 (+) |
| LOC118946451 | adgrb2 | coding | downstream | 1161759 | 13274220 ~ 13491588 (+) |
| LOC110487938 | adgrb2 | coding | downstream | 1395127 | 13507588 ~ 13724989 (+) |
| G2296450 | NA | non-coding | upstream | 5994 | 11915196 ~ 11977297 (+) |
| G2296448 | NA | non-coding | upstream | 21089 | 11901519 ~ 11962202 (+) |
| G2296410 | NA | non-coding | upstream | 71954 | 11883484 ~ 11911337 (+) |
| G2296443 | NA | non-coding | upstream | 88432 | 11891931 ~ 11894859 (+) |
| G2296920 | NA | non-coding | downstream | 6911 | 12119372 ~ 12120455 (+) |
| G2296941 | NA | non-coding | downstream | 63045 | 12175506 ~ 12176079 (+) |
| G2297039 | NA | non-coding | downstream | 122044 | 12234505 ~ 12235139 (+) |
| G2297045 | NA | non-coding | downstream | 126807 | 12239268 ~ 12301910 (+) |
| G2297072 | NA | non-coding | downstream | 209049 | 12321510 ~ 12322066 (+) |
| G2296278 | NA | other | upstream | 418701 | 11563547 ~ 11564590 (+) |
| G2296150 | LOC106570575 | other | upstream | 692988 | 11285493 ~ 11290303 (+) |
| LOC110487904 | snrpd1 | other | upstream | 1461984 | 10509464 ~ 10521398 (+) |
| G2298390 | NA | other | downstream | 1517601 | 13630062 ~ 13630795 (+) |
| G2298739 | NA | other | downstream | 1640806 | 13753267 ~ 13753517 (+) |
| G2298884 | NA | other | downstream | 1901771 | 14014232 ~ 14015587 (+) |
| LOC118936620 | LOC106570515 | other | downstream | 2094705 | 14207166 ~ 14225549 (+) |
| G2299191 | NA | other | downstream | 2191275 | 14303736 ~ 14304232 (+) |
