LOC110487967 (LOC106570526)


Basic Information

Item Value
gene id LOC110487967
gene name LOC106570526
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 14687912 ~ 14726969 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971410.1
TCCCGCGCACCCAGGCAGCTGTTGAAGGCGGCTGCGGTTCGAGCGAGATGCCAGCCTACCGTAGACTATACGCACGGCATACACTTCTAGTTCCACTGTCCCGAGTCCCGGTAGTAGTAAACCCCGCCCATCCAAAGCGGGACCGCAATGATTTAGAAGTTCAGGAATCCCACGTGACGTCACCTTAGGGGTGATGTAATGCTTCTGTAAATAGAATGTATTGTAATCCTGCCTCAGTCCAACGTGGTTCCTCTCAACTCAGTGCCGCTTGTCCGCTCCACTTGTTAGATTTGTAATGGAGATGAATGATGAACAGGACCGGCCCTATGGATGCAGCACTCCTGGCTGCTCACagCGGTTCCAAACAGAAGACCACCTGATGATCCACAGACACAAGCATGAGATGACCCTCAAGTTCTCCTCCATCAAGACTGATCCCCTCGCAGACCAGACCCCAACGCCGACCCGTTTCCTGCGTAACTGTGAGGAGGTGGGTCTCTTCAATGAGATCGAACAGGAGTTCTGCCAGGCACAGGAGGAGCAGAACAACAAACAGaCTCAGAATCTCCCTCAGAATGGATCATCATGTGCCAATCAGCCCCAGGCACAGCCCCACTCCCAACACCAACCACTGCCCCATGGTAGTATGAGGGGTCTAAGCTGCAGCATGGCTGGCCAACAAGCACTGCCCTCTGCCCAGTCCAACTCAGTCATCACCCAGGCCCCCTCCATGCTCACACACTCAGGACCAGTCCCTGGgcccctctcctccctactgcaCCTGAGgaacaacagacagagacagccccTGGCTGCCTCTATGcctggcactctgccagacccagACATGCAGGGAGCATCTGCCCAGCACATGTCTatggaaagacagatgtcTATGGGATCCAGTATGATGAGCATCCAAGGTCCCCTCCACAACACTTCCTGCTCTTCACCTCAGAGGGCTAAAACTATGGGTCACCCCCACCAACACcatcaccaacaccaacaccccGGAGCTGTCGCCAACAGCAACATGGATCCCACCATAGGTCACATGATGGAGATGATGTCACCGCGGCAACGACACACTCACCTGCAGCAGCCTCATCAGCACCTGCAGCAGACTCTGCCCATCTCCTACCAGCAGCACTGCCACGCCTCTCCACATCACCTGGGAAGCGCCCACAGCCAGGGGCACCAATCAGGGAATGTGCTGCATCATCAGGTTCACCAATCACCTCCCTCGCAACTGCAGGCCAGCCACACCCACCAAACCTCCCCTCAGCTGCCCCTCCACTCCATAGCTGTTCAGTCATCCCAGCAGACACATTCCCTGCATGCAGGCCAGGTGGCTGGAGGACGTCGCAGGAGGTCTGTGGGCCAGGACCCAGACGAGCGCAGGCAGAAGTTCCTGGAACGCAACAGAGCTGCGGCCACGCGATGCAGACAGAAGAGGAAGGTCTGGGTGTCTGCTCTGGAGAAGAAGGCAGAGGAGCTGACGCACAACAACATGCAGCTCCAGAATGAGGTGACCACTCTGAGGTCAGAGGTTGGTCAGCTGAAGCAGATCCTGCTGACCCATAAAGACTGTCTGGTTACCGCCCGCCAGAGAGAATCACAGGGGTACCTCAGTCCAGGGAGTTCGACAGGAAGTCCGTCCCCCCTGTGTCCCGGGTTGCAGCGGCAGGCCATCCAATCCAACAGCATCTCCACCTCCTCAGCCTCCTCAGATTAAAAATGAAAGCATGGATGGCTGAATTTCATTAGTTCACAAGAGTTGGATCCAGGGTTGCCCATGCACACACAGGGTTTAATCCCTGGTTCCAAGGGGTTGAATCAGTTCTAGAATCAGCTCACCCTTCCCATAATCATTGGTGgttgcatctcagtagtctaaatggctccctctcctgctctcctagCCTCAATGGACACAGGTATGACAGAACTGGACTGACTGGCCTCTACAAGCCTTGAGTCTCTGCTACCGTTGCACATTTACAGTGACTTTCCTGAAATTCCAGAAATCCCGGTTGGACGATTcccggatttcctgcttattgcCTCCTGATTTCCATAAAACCTGTGAATTTTGGTGAAGTTACAGAATTGTTGCAACCCTAGTCTATGTCTCTCCAACACTGTGATGATAGTCACATGTAAATTGGATCATATTGTGTCTTTAGGAATCTCAGTCAATCTATGTGTCTCTGTTAGTGTGAAATCAGAAATCCAAGTACTGCTCTAGGACTGTTCCAACCTGGGCTCTGTGTGCAAACATACCTGTTATTATGTCCTTTAGCTTAAAGTAGTGACTGCATACAGTTTTGTTAATGGTCCCACATGGGAGTCAaccccacaaccctggcattgcaagcaccaccatgctgtaccaactgagccacacgggacttCATCGCGTCAGCTTGTTCTCAGAATGTGACATGGTTAGGTCTTGGTTAGGTTTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGGTTTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGG
>XM_036971411.1
TCCCGCGCACCCAGGCAGCTGTTGAAGGCGGCTGCGGTTCGAGCGAGATGCCAGCCTACCGTAGACTATACGCACGGCATACACTTCTAGTTCCACTGTCCCGAGTCCCGGTAGTAGTAAACCCCGCCCATCCAAAGCGGGACCGCAATGATTTAGAAGTTCAGGAATCCCACGTGACGTCACCTTAGGGGTGATGTAATGCTTCTGTAAATAGAATGTATTGTAATCCTGCCTCAGTCCAACGTGGTTCCTCTCAACTCAGTGCCGCTTGTCCGCTCCACTTGTTAGGTTtgtctctcctctggtctctctgacTGTAGATTTGTAATGGAGATGAATGATGAACAGGACCGGCCCTATGGATGCAGCACTCCTGGCTGCTCACagCGGTTCCAAACAGAAGACCACCTGATGATCCACAGACACAAGCATGAGATGACCCTCAAGTTCTCCTCCATCAAGACTGATCCCCTCGCAGACCAGACCCCAACGCCGACCCGTTTCCTGCGTAACTGTGAGGAGGTGGGTCTCTTCAATGAGATCGAACAGGAGTTCTGCCAGGCACAGGAGGAGCAGAACAACAAACAGaCTCAGAATCTCCCTCAGAATGGATCATCATGTGCCAATCAGCCCCAGGCACAGCCCCACTCCCAACACCAACCACTGCCCCATGGTAGTATGAGGGGTCTAAGCTGCAGCATGGCTGGCCAACAAGCACTGCCCTCTGCCCAGTCCAACTCAGTCATCACCCAGGCCCCCTCCATGCTCACACACTCAGGACCAGTCCCTGGgcccctctcctccctactgcaCCTGAGgaacaacagacagagacagccccTGGCTGCCTCTATGcctggcactctgccagacccagACATGCAGGGAGCATCTGCCCAGCACATGTCTatggaaagacagatgtcTATGGGATCCAGTATGATGAGCATCCAAGGTCCCCTCCACAACACTTCCTGCTCTTCACCTCAGAGGGCTAAAACTATGGGTCACCCCCACCAACACcatcaccaacaccaacaccccGGAGCTGTCGCCAACAGCAACATGGATCCCACCATAGGTCACATGATGGAGATGATGTCACCGCGGCAACGACACACTCACCTGCAGCAGCCTCATCAGCACCTGCAGCAGACTCTGCCCATCTCCTACCAGCAGCACTGCCACGCCTCTCCACATCACCTGGGAAGCGCCCACAGCCAGGGGCACCAATCAGGGAATGTGCTGCATCATCAGGTTCACCAATCACCTCCCTCGCAACTGCAGGCCAGCCACACCCACCAAACCTCCCCTCAGCTGCCCCTCCACTCCATAGCTGTTCAGTCATCCCAGCAGACACATTCCCTGCATGCAGGCCAGGTGGCTGGAGGACGTCGCAGGAGGTCTGTGGGCCAGGACCCAGACGAGCGCAGGCAGAAGTTCCTGGAACGCAACAGAGCTGCGGCCACGCGATGCAGACAGAAGAGGAAGGTCTGGGTGTCTGCTCTGGAGAAGAAGGCAGAGGAGCTGACGCACAACAACATGCAGCTCCAGAATGAGGTGACCACTCTGAGGTCAGAGGTTGGTCAGCTGAAGCAGATCCTGCTGACCCATAAAGACTGTCTGGTTACCGCCCGCCAGAGAGAATCACAGGGGTACCTCAGTCCAGGGAGTTCGACAGGAAGTCCGTCCCCCCTGTGTCCCGGGTTGCAGCGGCAGGCCATCCAATCCAACAGCATCTCCACCTCCTCAGCCTCCTCAGATTAAAAATGAAAGCATGGATGGCTGAATTTCATTAGTTCACAAGAGTTGGATCCAGGGTTGCCCATGCACACACAGGGTTTAATCCCTGGTTCCAAGGGGTTGAATCAGTTCTAGAATCAGCTCACCCTTCCCATAATCATTGGTGgttgcatctcagtagtctaaatggctccctctcctgctctcctagCCTCAATGGACACAGGTATGACAGAACTGGACTGACTGGCCTCTACAAGCCTTGAGTCTCTGCTACCGTTGCACATTTACAGTGACTTTCCTGAAATTCCAGAAATCCCGGTTGGACGATTcccggatttcctgcttattgcCTCCTGATTTCCATAAAACCTGTGAATTTTGGTGAAGTTACAGAATTGTTGCAACCCTAGTCTATGTCTCTCCAACACTGTGATGATAGTCACATGTAAATTGGATCATATTGTGTCTTTAGGAATCTCAGTCAATCTATGTGTCTCTGTTAGTGTGAAATCAGAAATCCAAGTACTGCTCTAGGACTGTTCCAACCTGGGCTCTGTGTGCAAACATACCTGTTATTATGTCCTTTAGCTTAAAGTAGTGACTGCATACAGTTTTGTTAATGGTCCCACATGGGAGTCAaccccacaaccctggcattgcaagcaccaccatgctgtaccaactgagccacacgggacttCATCGCGTCAGCTTGTTCTCAGAATGTGACATGGTTAGGTCTTGGTTAGGTTTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGGTTTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGGTCTTGGTTAGG

Function

NR:

description
cyclic AMP-responsive element-binding protein 5-like isoform X2

GO: NA

KEGG:

id description
K09047 CREB5, CREBPA; cyclic AMP-responsive element-binding protein 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971410.1 False 2563 mRNA 0.53 11 14687912 14726969
XM_036971411.1 True 2595 mRNA 0.53 11 14687912 14726969

Neighbor

gene id symbol gene type direction distance location
LOC110489384 LOC106570524 coding upstream 49010 14582924 ~ 14638903 (+)
LOC110489442 LOC106570521 coding upstream 169934 14513613 ~ 14517978 (+)
LOC110487953 NA coding upstream 250001 14435905 ~ 14437911 (+)
LOC110487954 NA coding upstream 263369 14422452 ~ 14424543 (+)
LOC110487946 LOC106570515 coding upstream 427816 14242757 ~ 14260096 (+)
LOC110487969 LOC106570528 coding downstream 34143 14761112 ~ 14793523 (+)
LOC110487970 LOC106570529 coding downstream 70976 14797945 ~ 14807978 (+)
LOC110487973 LOC106570532 coding downstream 168707 14895676 ~ 14908383 (+)
LOC110487974 LOC106570531 coding downstream 185348 14912317 ~ 14918635 (+)
LOC110487975 LOC106570533 coding downstream 206674 14933643 ~ 14972153 (+)
G2299422 NA non-coding upstream 45114 14638968 ~ 14642798 (+)
G2299450 NA non-coding upstream 86675 14600580 ~ 14601237 (+)
G2299391 NA non-coding upstream 172051 14515632 ~ 14515861 (+)
G2299310 NA non-coding upstream 196848 14488439 ~ 14491064 (+)
G2299316 NA non-coding upstream 205490 14482217 ~ 14482422 (+)
G2299500 NA non-coding downstream 9995 14736964 ~ 14739942 (+)
G2299515 NA non-coding downstream 14793 14741762 ~ 14741971 (+)
G2299517 NA non-coding downstream 17265 14744234 ~ 14744449 (+)
G2299518 NA non-coding downstream 20557 14747526 ~ 14747746 (+)
G2299520 NA non-coding downstream 23074 14750043 ~ 14750577 (+)
G2299272 NA other upstream 268235 14418661 ~ 14419677 (+)
G2299191 NA other upstream 383680 14303736 ~ 14304232 (+)
LOC118936620 LOC106570515 other upstream 464035 14207166 ~ 14225549 (+)
G2299643 trmt13 other downstream 296664 15023633 ~ 15028263 (+)
LOC110487981 LOC106570537 other downstream 405298 15131738 ~ 15188805 (+)
G2300167 NA other downstream 690257 15417226 ~ 15417507 (+)
G2300406 NA other downstream 1153712 15880681 ~ 15882161 (+)
dss1 NA other downstream 1476504 16203473 ~ 16252597 (+)

Expression


Co-expression Network