LOC110487973 (LOC106570532)


Basic Information

Item Value
gene id LOC110487973
gene name LOC106570532
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 14895676 ~ 14908383 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559901.2
GGTCTCATTGACCAAACACTTGCATGCATGTTTATGAGCAATATATTTCCCACAAATCCCTACGGCAAACAGTGAATCGTGATGACGCAAAACACAACACGAGGAGAAACCGGCTGAACTCGCGAacgaataaaaaataaatcctaGACATGCAAACAATTATACAATGCAAGTTTTACTTCCGAATTGCCTATTTGTTTCAGTTACATTACTTATGAAGATTATTGAATAGTTAGAAGCCGTACTAGCAGAATTTCGGTATCTGCCCTGTGCACTCATCTGTTCTCGGTTTTGGAATGGGATTGCAGACTGACGTTTTGAACAGCAGAGTGACTCAAACGAACAAATCCAGatcCTCCCTCTCTGAATGACTCAGGCAGCTATGTATGTGTTTGGGTCCCATGGTTGACTGCCAGGTTTGGGCCCCATGATTGGCTGCTAGGTTTGTAAAGTGTTCTACTCCTCCAAACCCAACCCAAGCCCTATATCCCCCAGTCCTAACCCCTTAGCCCTGTGTCATTATTTTGCCTGACTAGCCCGAGCTCCACACACTACTAGCCCTTAACCCTTTGCCTCCAGATCCCTCTCCTTTCTTTCCTAACACCAGCCACCTCCAGACCCAGTACCAGCCCCAAGCCCCTCTCCCAACCCTGTTCTTCTAGTCCCACCCTCTATTCCCCCAGACCCCTACCCCTCTCCCCTGGCCCAGCCCCACATCCAGCCCCAGTACCATGCTGGGGAGGAACATGTCCCACAAGCTGAGCGTGCTGCTGATCATCATGGGGCTGGCGTGGGGGCTCATGTTGCTGCTCTACACCGGGCAGCAGCAACACCACCAGAGCAGTGGCGAGCTGCATCAACAGATCCTGGAGCTGAGCCGGCGCTATGTCAAGGTGCTAACCGAGGAGAACCGGAACGCACCGGGAGGCCCGCAGGGCACCTCCATGGCTGGTTACGctgatctGAAGAGGACCATAGCGGTGTTGTTGGATGACATCCTGACGCGCCTGGTCAAGCTGGAGGGGAAGATTGAGCTGGTGGCCAACACTTCAGTCACTAACTCCTCCCATCTTGCTGTGGGTGCCCTGGCCTCAGCTCCAGTTGCCTTACACAAAGCCACCAAGCAGGACACGCCAGGCAACCACCACCTGGAAACCGCTCGCATCTCTCCATACACACCCAGCAGACCTCGGCCAGGGGTATAGTAGGTTGGGTAGTGATTGAGGCCCTGTTCAAGTACTTTACAAGTGCATCCTTTCTTCCTAAGATGGTCACTGATCTAATAAGGTTGATAGGGTGGTAACTCTCATTTCACTTGTTTATTAATTTACAGATCAGTGATTTATCTCAAGGGAGcaagaaaataaatatat
>XM_021559903.2
GGTCTCATTGACCAAACACTTGCATGCATGTTTATGAGCAATATATTTCCCACAAATCCCTACGGCAAACAGTGAATCGTGATGACGCAAAACACAACACGAGGAGAAACCGGCTGAACTCGCGAacgaataaaaaataaatcctaGACATGCAAACAATTATACAATGCAAGTTTTACTTCCGAATTGCCTATTTGTTTCAGTTACATTACTTATGAAGATTATTGAATAGTTAGAAGCCGTACTAGCAGAATTTCGGTATCTGCCCTGTGCACTCATCTGTTCTCGGTTTTGGAATGGGATTGCAGACTGACGTTTTGAACAGCAGAGTGACTCAAACGAACAAATCCAGGACTTGTGGGATGGCCTTTTCCTGCTCCAGGACTCTCTCCATCATCGGCAGatcCTCCCTCTCTGAATGACTCAGGCAGCTATGTATGTGTTTGGGTCCCATGGTTGACTGCCAGGTTTGGGCCCCATGATTGGCTGCTAGGTTTGTAAAGTGTTCTACTCCTCCAAACCCAACCCAAGCCCTATATCCCCCAGTCCTAACCCCTTAGCCCTGTGTCATTATTTTGCCTGACTAGCCCGAGCTCCACACACTACTAGCCCTTAACCCTTTGCCTCCAGATCCCTCTCCTTTCTTTCCTAACACCAGCCACCTCCAGACCCAGTACCAGCCCCAAGCCCCTCTCCCAACCCTGTTCTTCTAGTCCCACCCTCTATTCCCCCAGACCCCTACCCCTCTCCCCTGGCCCAGCCCCACATCCAGCCCCAGTACCATGCTGGGGAGGAACATGTCCCACAAGCTGAGCGTGCTGCTGATCATCATGGGGCTGGCGTGGGGGCTCATGTTGCTGCTCTACACCGGGCAGCAGCAACACCACCAGAGCAGTGGCGAGCTGCATCAACAGATCCTGGAGCTGAGCCGGCGCTATGTCAAGGTGCTAACCGAGGAGAACCGGAACGCACCGGGAGGCCCGCAGGGCACCTCCATGGCTGGTTACGctgatctGAAGAGGACCATAGCGGTGTTGTTGGATGACATCCTGACGCGCCTGGTCAAGCTGGAGGGGAAGATTGAGCTGGTGGCCAACACTTCAGTCACTAACTCCTCCCATCTTGCTGTGGGTGCCCTGGCCTCAGCTCCAGTTGCCTTACACAAAGCCACCAAGCAGGACACGCCAGGCAACCACCACCTGGAAACCGCTCGCATCTCTCCATACACACCCAGCAGACCTCGGCCAGGGGTATAGTAGGTTGGGTAGTGATTGAGGCCCTGTTCAAGTACTTTACAAGTGCATCCTTTCTTCCTAAGATGGTCACTGATCTAATAAGGTTGATAGGGTGGTAACTCTCATTTCACTTGTTTATTAATTTACAGATCAGTGATTTATCTCAAGGGAGcaagaaaataaatatat
>XM_021559904.2
GGTCTCATTGACCAAACACTTGCATGCATGTTTATGAGCAATATATTTCCCACAAATCCCTACGGCAAACAGTGAATCGTGATGACGCAAAACACAACACGAGGAGAAACCGGCTGAACTCGCGAacgaataaaaaataaatcctaGACATGCAAACAATTATACAATGCAAGTTTTACTTCCGAATTGCCTATTTGTTTCAGTTACATTACTTATGAAGATTATTGAATAGTTAGAAGCCGTACTAGCAGAATTTCGGTATCTGCCCTGTGCACTCATCTGTTCTCGGTTTTGGAATGGGATTGCAGACTGACGTTTTGAACAGCAGAGTGACTCAAACGAACAAATCCAGGGCATCTGTGAAATCCTGGAGAGGCGTAAGTGCTGCGGTGACAGATTCTAAGACCTCAATGTTTTGCCAGGAGTGTGCAAGTTACTGTGTTTTTTGTCTGCTGCCAGGACTTGTGGGATGGCCTTTTCCTGCTCCAGGACTCTCTCCATCATCGGCAGatcCTCCCTCTCTGAATGACTCAGGCAGCTATGTATGTGTTTGGGTCCCATGGTTGACTGCCAGGTTTGGGCCCCATGATTGGCTGCTAGGTTTGTAAAGTGTTCTACTCCTCCAAACCCAACCCAAGCCCTATATCCCCCAGTCCTAACCCCTTAGCCCTGTGTCATTATTTTGCCTGACTAGCCCGAGCTCCACACACTACTAGCCCTTAACCCTTTGCCTCCAGATCCCTCTCCTTTCTTTCCTAACACCAGCCACCTCCAGACCCAGTACCAGCCCCAAGCCCCTCTCCCAACCCTGTTCTTCTAGTCCCACCCTCTATTCCCCCAGACCCCTACCCCTCTCCCCTGGCCCAGCCCCACATCCAGCCCCAGTACCATGCTGGGGAGGAACATGTCCCACAAGCTGAGCGTGCTGCTGATCATCATGGGGCTGGCGTGGGGGCTCATGTTGCTGCTCTACACCGGGCAGCAGCAACACCACCAGAGCAGTGGCGAGCTGCATCAACAGATCCTGGAGCTGAGCCGGCGCTATGTCAAGGTGCTAACCGAGGAGAACCGGAACGCACCGGGAGGCCCGCAGGGCACCTCCATGGCTGGTTACGctgatctGAAGAGGACCATAGCGGTGTTGTTGGATGACATCCTGACGCGCCTGGTCAAGCTGGAGGGGAAGATTGAGCTGGTGGCCAACACTTCAGTCACTAACTCCTCCCATCTTGCTGTGGGTGCCCTGGCCTCAGCTCCAGTTGCCTTACACAAAGCCACCAAGCAGGACACGCCAGGCAACCACCACCTGGAAACCGCTCGCATCTCTCCATACACACCCAGCAGACCTCGGCCAGGGGTATAGTAGGTTGGGTAGTGATTGAGGCCCTGTTCAAGTACTTTACAAGTGCATCCTTTCTTCCTAAGATGGTCACTGATCTAATAAGGTTGATAGGGTGGTAACTCTCATTTCACTTGTTTATTAATTTACAGATCAGTGATTTATCTCAAGGGAGcaagaaaataaatatat
>XM_036970679.1
GGTCTCATTGACCAAACACTTGCATGCATGTTTATGAGCAATATATTTCCCACAAATCCCTACGGCAAACAGTGAATCGTGATGACGCAAAACACAACACGAGGAGAAACCGGCTGAACTCGCGAacgaataaaaaataaatcctaGACATGCAAACAATTATACAATGCAAGTTTTACTTCCGAATTGCCTATTTGTTTCAGTTACATTACTTATGAAGATTATTGAATAGTTAGAAGCCGTACTAGCAGAATTTCGGTATCTGCCCTGTGCACTCATCTGTTCTCGGTTTTGGAATGGGATTGCAGACTGACGTTTTGAACAGCAGAGTGACTCAAACGAACAAATCCAGGACTTGTGGGATGGCCTTTTCCTGCTCCAGGACTCTCTCCATCATCGGCAGGAAAATGTGCTGACCACTTTCTTGCACACTTCTGTGGAAACCGGAGGTTCATTTTGGATACTCCTctctaaaaaataaaaagatcCTCCCTCTCTGAATGACTCAGGCAGCTATGTATGTGTTTGGGTCCCATGGTTGACTGCCAGGTTTGGGCCCCATGATTGGCTGCTAGGTTTGTAAAGTGTTCTACTCCTCCAAACCCAACCCAAGCCCTATATCCCCCAGTCCTAACCCCTTAGCCCTGTGTCATTATTTTGCCTGACTAGCCCGAGCTCCACACACTACTAGCCCTTAACCCTTTGCCTCCAGATCCCTCTCCTTTCTTTCCTAACACCAGCCACCTCCAGACCCAGTACCAGCCCCAAGCCCCTCTCCCAACCCTGTTCTTCTAGTCCCACCCTCTATTCCCCCAGACCCCTACCCCTCTCCCCTGGCCCAGCCCCACATCCAGCCCCAGTACCATGCTGGGGAGGAACATGTCCCACAAGCTGAGCGTGCTGCTGATCATCATGGGGCTGGCGTGGGGGCTCATGTTGCTGCTCTACACCGGGCAGCAGCAACACCACCAGAGCAGTGGCGAGCTGCATCAACAGATCCTGGAGCTGAGCCGGCGCTATGTCAAGGTGCTAACCGAGGAGAACCGGAACGCACCGGGAGGCCCGCAGGGCACCTCCATGGCTGGTTACGctgatctGAAGAGGACCATAGCGGTGTTGTTGGATGACATCCTGACGCGCCTGGTCAAGCTGGAGGGGAAGATTGAGCTGGTGGCCAACACTTCAGTCACTAACTCCTCCCATCTTGCTGTGGGTGCCCTGGCCTCAGCTCCAGTTGCCTTACACAAAGCCACCAAGCAGGACACGCCAGGCAACCACCACCTGGAAACCGCTCGCATCTCTCCATACACACCCAGCAGACCTCGGCCAGGGGTATAGTAGGTTGGGTAGTGATTGAGGCCCTGTTCAAGTACTTTACAAGTGCATCCTTTCTTCCTAAGATGGTCACTGATCTAATAAGGTTGATAGGGTGGTAACTCTCATTTCACTTGTTTATTAATTTACAGATCAGTGATTTATCTCAAGGGAGcaagaaaataaatatat
>XM_036970680.1
GGTCTCATTGACCAAACACTTGCATGCATGTTTATGAGCAATATATTTCCCACAAATCCCTACGGCAAACAGTGAATCGTGATGACGCAAAACACAACACGAGGAGAAACCGGCTGAACTCGCGAacgaataaaaaataaatcctaGACATGCAAACAATTATACAATGCAAGTTTTACTTCCGAATTGCCTATTTGTTTCAGTTACATTACTTATGAAGATTATTGAATAGTTAGAAGCCGTACTAGCAGAATTTCGGTATCTGCCCTGTGCACTCATCTGTTCTCGGTTTTGGAATGGGATTGCAGACTGACGTTTTGAACAGCAGAGTGACTCAAACGAACAAATCCAGGGCATCTGTGAAATCCTGGAGAGGCGTAAGTGCTGCGGTGACAGATTCTAAGACCTCAATGTTTTGCCAGGAGTGTGCAAGTTACTGTGTTTTTTGTCTGCTGCCAGGACTTGTGGGATGGCCTTTTCCTGCTCCAGGACTCTCTCCATCATCGGCAGGAAAATGTGCTGACCACTTTCTTGCACACTTCTGTGGAAACCGGAGGTTCATTTTGGATACTCCTctctaaaaaataaaaagatcCTCCCTCTCTGAATGACTCAGGCAGCTATGTATGTGTTTGGGTCCCATGGTTGACTGCCAGGTTTGGGCCCCATGATTGGCTGCTAGGTTTGTAAAGTGTTCTACTCCTCCAAACCCAACCCAAGCCCTATATCCCCCAGTCCTAACCCCTTAGCCCTGTGTCATTATTTTGCCTGACTAGCCCGAGCTCCACACACTACTAGCCCTTAACCCTTTGCCTCCAGATCCCTCTCCTTTCTTTCCTAACACCAGCCACCTCCAGACCCAGTACCAGCCCCAAGCCCCTCTCCCAACCCTGTTCTTCTAGTCCCACCCTCTATTCCCCCAGACCCCTACCCCTCTCCCCTGGCCCAGCCCCACATCCAGCCCCAGTACCATGCTGGGGAGGAACATGTCCCACAAGCTGAGCGTGCTGCTGATCATCATGGGGCTGGCGTGGGGGCTCATGTTGCTGCTCTACACCGGGCAGCAGCAACACCACCAGAGCAGTGGCGAGCTGCATCAACAGATCCTGGAGCTGAGCCGGCGCTATGTCAAGGTGCTAACCGAGGAGAACCGGAACGCACCGGGAGGCCCGCAGGGCACCTCCATGGCTGGTTACGctgatctGAAGAGGACCATAGCGGTGTTGTTGGATGACATCCTGACGCGCCTGGTCAAGCTGGAGGGGAAGATTGAGCTGGTGGCCAACACTTCAGTCACTAACTCCTCCCATCTTGCTGTGGGTGCCCTGGCCTCAGCTCCAGTTGCCTTACACAAAGCCACCAAGCAGGACACGCCAGGCAACCACCACCTGGAAACCGCTCGCATCTCTCCATACACACCCAGCAGACCTCGGCCAGGGGTATAGTAGGTTGGGTAGTGATTGAGGCCCTGTTCAAGTACTTTACAAGTGCATCCTTTCTTCCTAAGATGGTCACTGATCTAATAAGGTTGATAGGGTGGTAACTCTCATTTCACTTGTTTATTAATTTACAGATCAGTGATTTATCTCAAGGGAGcaagaaaataaatatat

Function

NR:

description
coiled-coil domain-containing protein 126-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559901.2 False 1373 mRNA 0.51 3 14895676 14908383
XM_021559903.2 False 1424 mRNA 0.51 4 14895676 14908383
XM_021559904.2 False 1531 mRNA 0.51 4 14895676 14908383
XM_036970679.1 False 1506 mRNA 0.50 5 14895676 14908383
XM_036970680.1 True 1613 mRNA 0.50 5 14895676 14908383

Neighbor

gene id symbol gene type direction distance location
LOC110487970 LOC106570529 coding upstream 87698 14797945 ~ 14807978 (+)
LOC110487969 LOC106570528 coding upstream 102153 14761112 ~ 14793523 (+)
LOC110487967 LOC106570526 coding upstream 168707 14687912 ~ 14726969 (+)
LOC110489384 LOC106570524 coding upstream 256774 14582924 ~ 14638903 (+)
LOC110489442 LOC106570521 coding upstream 377698 14513613 ~ 14517978 (+)
LOC110487974 LOC106570531 coding downstream 3934 14912317 ~ 14918635 (+)
LOC110487975 LOC106570533 coding downstream 25260 14933643 ~ 14972153 (+)
LOC118946541 NA coding downstream 108641 15017024 ~ 15017839 (+)
LOC118946527 NA coding downstream 111155 15019538 ~ 15023593 (+)
LOC110487978 oxnad1 coding downstream 127016 15035150 ~ 15046389 (+)
G2299577 NA non-coding upstream 15258 14879819 ~ 14880418 (+)
G2299541 NA non-coding upstream 70800 14822575 ~ 14824876 (+)
G2299536 LOC106570530 non-coding upstream 78400 14814211 ~ 14817276 (+)
G2299531 NA non-coding upstream 106932 14788308 ~ 14788744 (+)
G2299521 NA non-coding upstream 141222 14754139 ~ 14754454 (+)
G2299601 NA non-coding downstream 13012 14921395 ~ 14922723 (+)
G2299609 NA non-coding downstream 22096 14930479 ~ 14930721 (+)
G2299610 NA non-coding downstream 22503 14930886 ~ 14931294 (+)
G2299640 NA non-coding downstream 89391 14997774 ~ 14998042 (+)
G2299272 NA other upstream 475999 14418661 ~ 14419677 (+)
G2299191 NA other upstream 591444 14303736 ~ 14304232 (+)
LOC118936620 LOC106570515 other upstream 671799 14207166 ~ 14225549 (+)
G2299643 trmt13 other downstream 115250 15023633 ~ 15028263 (+)
LOC110487981 LOC106570537 other downstream 223884 15131738 ~ 15188805 (+)
G2300167 NA other downstream 508843 15417226 ~ 15417507 (+)
G2300406 NA other downstream 972298 15880681 ~ 15882161 (+)
dss1 NA other downstream 1295090 16203473 ~ 16252597 (+)

Expression


Co-expression Network