LOC118946541



Basic Information


Item Value
gene id LOC118946541
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 15017024 ~ 15017839 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036971842.1
ATGGGTGGGAGGGTCAAGAGACCAGAGGAGGCAGGACAGGAGCTGCCCTCCCCTATGGGTGGGAGGGTCaagagaccagaggaggctgaaCAGGAGCTGCCCTCCCCTATGGGTGGGAGGGTCaagagaccagaggaggctgaaCAGGAGCTGCCCTCCCCTATGGGTGGGAGGGTCAAGAGACCAGAGGAGGCAGAACAGGAGCTGCCCTCCCCTatgggtgggagggccaagagaccagaggaggCAGAACAGGAGCTGCCCTCCCCTATGGGTGGGAGGGTCAAGAGACCAGAGGAGGCAGAACAGGAGCTGCCCTCCCCTatgggtgggagggccaagagaccagaggaggCAGAACAGGAGCTGCCCTCCCCTATGGGTGGGAGGGTCAAGAGACCAGAGGAGGCAGAACAGGAGCTGCTCTCCCCTATGGGTGGGAGGGTCAAGAGACCAGAGGAGGCAGAACAGGAGCTGCCCTCCCCTatgggtgggagggccaagagaccagaggaggCAGAACAGGAGCTGCCCTCCCCTATGGGTGGGAGGGTCAAGAGACCAGAGGAGGCAGAACAGGAGCTGCTCTCCCCTATGGGTGGGAGGGTCAAGAGACCAGAGGAGGCAGAACAGGAGCTGCCCTCCCCTatgggtgggagggccaagagaccagaggaggCAGAACAGGAGCTGCCCTCCCCTatgggtgggagggccaagagaccagaggaggCAGAACAGGAGCTGCCCTCCCCTatgggtgggagggccaagagaccggAGGAggcagaacagagtgctcgggttgggatgTAG

Function


NR:

description
PREDICTED: uncharacterized protein LOC106593792 isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036971842.1 True 816 mRNA 0.63 1 15017024 15017839

Neighbor


gene id symbol gene type direction distance location
LOC110487975 LOC106570533 coding upstream 44871 14933643 ~ 14972153 (+)
LOC110487974 LOC106570531 coding upstream 98389 14912317 ~ 14918635 (+)
LOC110487973 LOC106570532 coding upstream 108641 14895676 ~ 14908383 (+)
LOC110487970 LOC106570529 coding upstream 209046 14797945 ~ 14807978 (+)
LOC110487969 LOC106570528 coding upstream 223501 14761112 ~ 14793523 (+)
LOC118946527 NA coding downstream 1699 15019538 ~ 15023593 (+)
LOC110487978 oxnad1 coding downstream 17560 15035150 ~ 15046389 (+)
LOC110487981 LOC106570537 coding downstream 113899 15131738 ~ 15188805 (+)
LOC110489387 LOC106588864 coding downstream 312228 15330067 ~ 15398500 (+)
LOC118946488 LOC106570510 coding downstream 386891 15404730 ~ 15413624 (+)
G2299641 NA non-coding upstream 18474 14998219 ~ 14998550 (+)
G2299640 NA non-coding upstream 18982 14997774 ~ 14998042 (+)
G2299610 NA non-coding upstream 85730 14930886 ~ 14931294 (+)
G2299609 NA non-coding upstream 86303 14930479 ~ 14930721 (+)
G2299643 trmt13 non-coding downstream 7732 15023633 ~ 15028263 (+)
G2299644 NA non-coding downstream 13856 15031695 ~ 15031920 (+)
G2299645 NA non-coding downstream 14414 15032253 ~ 15032472 (+)
G2299646 NA non-coding downstream 15121 15032960 ~ 15033255 (+)
LOC110489384 LOC106570524 other upstream 378121 14582924 ~ 14638903 (+)
LOC110489442 LOC106570521 other upstream 501590 14513613 ~ 14517978 (+)
G2299272 NA other upstream 597347 14418661 ~ 14419677 (+)
G2299191 NA other upstream 712792 14303736 ~ 14304232 (+)
LOC118936620 LOC106570515 other upstream 793147 14207166 ~ 14225549 (+)
G2300167 NA other downstream 399387 15417226 ~ 15417507 (+)
G2300406 NA other downstream 862842 15880681 ~ 15882161 (+)
dss1 NA other downstream 1185634 16203473 ~ 16252597 (+)

Expression



Co-expression Network