LOC110488022 (tfpi2)


Basic Information

Item Value
gene id LOC110488022
gene name tfpi2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 16827065 ~ 16834652 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559977.2
TGGGAAAACCTTTACAATAGTATAAATGGCTGCACATCTCGTGCGTAAAATTAGAAGGGTAGTTGAATTTAGAACCGATCTACAACAATGGAGTTCAGTTCATTGATTTTTCTGATATTTTCATGCTCCCTTTGTTACGTTTTTGCGTTGTCACCGAAACAAGAGGTGTGTCTTCTTCCAGTAGACGAGGGGCCTTGCAGAGGAGATAGCCAGCGTTACTACTACAATACTATCACTCAACAATGCGAGGTGTTCAGCTATGGAGGCTGCCAAGGGAATGGCAACAACTTCATGAGTTTTATGGAATGTAAGAAAGCATGTTTTAGGATACCAAAGATCCCCCAGATCTGCAGGTTCCAGAAGGAGGAGGGCCCCTGCCGTGCCATGCACTGGCGCTACTTCTTCAACATGACCACCATGCAGTGTGAGCAGTTTGTCTACGGTGGCTGTCAGGGCAACGAGAACCGCTTCCAGAACCAGATGTCTTGCATGGAGTACTGTAGaccacacaaaaCTACTCCTATGCTCTGCCTGGATCCCCTGGATAAAGGAGGCTGTGCTGCGTCTATACTGCGCTATTACTACAACTCAGCTTCCAGGATGTGTGAGCAGTTCATCTATTCAGGCTGTGGAGGAAGCAGCAACAACTTTATATCCAGGCAAAGCTGCATGGACGTCTGTGCTAAAGgaaaccatggaaacccagAAGAACAGGCTTGAAGAGAACAACCGCCAAAAAACGCATTAGAATAAAGTCTAATAACGGTATTAAATGGTCAAAAATTTGATTCAGTGATTTTTATTCAAAGAGACACATGAATTGACTGTAAATGAACAGACATTGAAATGTTgatttgtatgtttgttttttactTTACCAGAAGTAACTAGCTACTTGCACTGCCTTTTCTATAGATGTTAACTGTGATGCACTGTTGAAAATAGCGAACCAACCACCCAAATGGGAATCAACCTACACTAGCAGTATTTTTTTTGTGTACCTTTCTCAAGATGGTGTATTGTAGAATACATTTACCATAGCAACTATCATACAATATAGCATTTCATTTTTGTTAGCAAAATAATGAATGTAtttttagtattttgtgtttttaacATAGTATATTTCAACAAAAACCTTTGGTTAGCTTTTTATGAAGTTTTCGCACAtggcattttttttaaactcaactTTTCCTTGTCTGGATAGTCCTGTTATTAAGCAGGAATAAGAACTGAATGTGTATCAATACttattttgtatttgttcttaactgacttgcctagttaaattaaaataatGACATCTTTA
>XM_021559976.2
GGAAAACCTTTACAATAGTATAAATGGCTGCACATCTCGTGCGTAAAATTAGAAGGGTAGTTGAATTTAGAACCGATCTACAACAATGGAGTTCAGTTCATTGATTTTTCTGATATTTTCATGCTCCCTTTGTTACGTTTTTGCGTTGTCACCGAAACAAGAGGTGTGTCTTCTTCCAGTAGACGAGGGGCCTTGCAGAGGAGATAGCCAGCGTTACTACTACAATACTATCACTCAACAATGCGAGGTGTTCAGCTATGGAGGCTGCCAAGGGAATGGCAACAACTTCATGAGTTTTATGGAATGTAAGAAAGCATGTTTTAGGATACCAAAGATCCCCCAGATCTGCAGGTTCCAGAAGGAGGAGGGCCCCTGCCGTGCCATGCACTGGCGCTACTTCTTCAACATGACCACCATGCAGTGTGAGCAGTTTGTCTACGGTGGCTGTCAGGGCAACGAGAACCGCTTCCAGAACCAGATGTCTTGCATGGAGTACTGTAGaccacacaaaaCTACTCCTATGCTCTGCCTGGATCCCCTGGATAAAGGAGGCTGTGCTGCGTCTATACTGCGCTATTACTACAACTCAGCTTCCAGGATGTGTGAGCAGTTCATCTATTCAGGCTGTGGAGGAAGCAGCAACAACTTTATATCCAGGCAAAGCTGCATGGACGTCTGTGCTAAAGCTaggaaaccatggaaacccagAAGAACAGGCTTGAAGAGAACAACCGCCAAAAAACGCATTAGAATAAAGTCTAATAACGGTATTAAATGGTCAAAAATTTGATTCAGTGATTTTTATTCAAAGAGACACATGAATTGACTGTAAATGAACAGACATTGAAATGTTgatttgtatgtttgttttttactTTACCAGAAGTAACTAGCTACTTGCACTGCCTTTTCTATAGATGTTAACTGTGATGCACTGTTGAAAATAGCGAACCAACCACCCAAATGGGAATCAACCTACACTAGCAGTATTTTTTTTGTGTACCTTTCTCAAGATGGTGTATTGTAGAATACATTTACCATAGCAACTATCATACAATATAGCATTTCATTTTTGTTAGCAAAATAATGAATGTAtttttagtattttgtgtttttaacATAGTATATTTCAACAAAAACCTTTGGTTAGCTTTTTATGAAGTTTTCGCACAtggcattttttttaaactcaactTTTCCTTGTCTGGATAGTCCTGTTATTAAGCAGGAATAAGAACTGAATGTGTATCAATACttattttgtatttgttcttaactgacttgcctagttaaattaaaataatGACATCTTTA
>TU2632933
GGTGCACACTCAGAGATGTGGGAGACAAGCACTTTACTGACAAATAAACCATCCAACAAAGCTCTGACAATCATTGCCAAAAACTACTCTTATTTACTGCATCAATTCAGGGAGATTAATTTACATGGGTTCATGAGGTTTATATATATTCAGAaattttaatttgttttttttgtttcttcTTGGTTGGCTAATGGTGATCCAGCAATGTTTCCTGGGTAGGGGGAATGTCCTTGGGCACTAGAGAGGGTCTAATCTGTTCTTCCTGTCCTCTTCAGCTGACAACACATCCATCTTTCAACTCCTTGAATGGGTTATTGTCCTCTGCAATACCTTTGACCAGAGTGTCCTCTTCTACACCAGCCTGAACGTCCTCCATAAACTCTGTACAGCACTTAGACGTCAGCCATCTCTCAAGCTTGACTTCAATCTTCTTTTGGTCTCTTTCCATTTTAGCCTTATCCACGTCTGTCAACTCGTCCATATTTATCACCCCCGGCATTGTAAGGACCAGTCTTCCACCCCTGAAAACTGCCAGAGAAATCCCTCTCCCTCAATCCAGGTTATAAAGTCATCTTCAACCTGTCATGATGAAGGATACATCATCATTAGGatcctctgcattgttggaaaaggacctgaaaAGGTGTGTCTTCTTCCAGTAGACGAGGGGCCTTGCAGAGGAGATAGCCAGCGTTACTACTACAATACTATCACTCAACAATGCGAGGTGTTCAGCTATGGAGGCTGCCAAGGGAATGGCAACAACTTCATGAGTTTTATGGAATGTAAGAAAGCATGTTTTAGGATACCAAAGATCCCCCAGATCTGCAGGTTCCAGAAGGAGGAGGGCCCCTGCCGTGCCATGCACTGGCGCTACTTCTTCAACATGACCACCATGCAGTGTGAGCAGTTTGTCTACGGTGGCTGTCAGGGCAACGAGAACCGCTTCCAGAACCAGATGTCTTGCATGGAGTACTGTAGaccacacaaaagaaaccatggaaacccagAAGAACAGGCTTGAAGAGAACAACCGCCAAAAAACGCATTAGAATAAAGTCTAATAACGGTATTAAATGGTCAAAAATTTGATTCAGTGATTTTTATTCAAAGAGACACATGAATTGACTGTAAATGAACAGACATTGAAATGTTgatttgtatgtttgttttttactTTACCAGAAGTAACTAGCTACTTGCACTGCCTTTTCTATAGATGTTAACTGTGATGCACTGTTGAAAATAGCGAACCAACCACCCAAATGGGAATCAACCTACACTAGCAGTATTTTTTTTGTGTACCTTTCTCAAGATGGTGTATTGTAGAATACATTTACCATAGCAAC

Function

symbol description
tfpi2 Predicted to enable serine-type endopeptidase inhibitor activity. Acts upstream of or within several processes, including heart development; regulation of hemopoiesis; and sarcomere organization. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in brain; eye; heart; liver; and ovary. Human ortholog(s) of this gene implicated in acute myeloid leukemia and retinal degeneration. Orthologous to human TFPI2 (tissue factor pathway inhibitor 2).

NR:

description
tissue factor pathway inhibitor 2 isoform X1

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559977.2 False 1312 mRNA 0.39 5 16830708 16834652
XM_021559976.2 False 1314 mRNA 0.39 5 16830710 16834652
TU2632933 True 1352 TUCP 0.42 7 16827065 16834385

Neighbor

gene id symbol gene type direction distance location
LOC110488019 LOC106570458 coding upstream 43869 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 193819 16603599 ~ 16639641 (+)
LOC110488016 LOC106570467 coding upstream 342753 16463563 ~ 16487955 (+)
LOC110488013 LOC106570470 coding upstream 479665 16228573 ~ 16351043 (+)
dss1 NA coding upstream 617871 16203473 ~ 16252597 (+)
calcr LOC106588943 coding downstream 12082 16846734 ~ 16955570 (+)
LOC110488025 cdk6 coding downstream 459691 17294343 ~ 17364119 (+)
fam133b fam133b coding downstream 534116 17368768 ~ 17374337 (+)
LOC110488030 LOC106588950 coding downstream 545517 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 558702 17393354 ~ 17421512 (+)
G2301630 NA non-coding upstream 3921 16826444 ~ 16826787 (+)
G2301627 NA non-coding upstream 6446 16824027 ~ 16824262 (+)
G2301625 NA non-coding upstream 7804 16822650 ~ 16822904 (+)
G2301623 NA non-coding upstream 10247 16820224 ~ 16820461 (+)
G2301617 NA non-coding upstream 16657 16813631 ~ 16814051 (+)
G2301606 NA non-coding downstream 826 16835478 ~ 16836144 (+)
G2301681 NA non-coding downstream 64397 16899049 ~ 16901831 (+)
G2301682 NA non-coding downstream 66430 16901082 ~ 16902163 (+)
G2301706 NA non-coding downstream 115405 16950057 ~ 16950275 (+)
G2301522 LOC106570460 other upstream 154037 16669607 ~ 16693934 (+)
G2301452 NA other upstream 305314 16524510 ~ 16525394 (+)
G2301841 NA other downstream 351913 17186565 ~ 17193117 (+)
G2303854 hsf1b other downstream 1942693 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 2166690 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 2519559 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2993565 19828217 ~ 19829961 (+)

Expression


Co-expression Network