fam133b (fam133b)


Basic Information

Item Value
gene id fam133b
gene name fam133b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 17368768 ~ 17374337 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559983.2
ATCACAGGTCTGTGTGTTCGTCGTAGTCAGAGAATCTAGCTACGTAGCTAGAGAAGCTCGCTTGTTGTGGTGGCTAACGACGGGAAGCATGCTACGGTTCTCAATTTAGTGATATTCGCCCAATAGTAGGCGAAATCTGCAGAAATGGGGAAAAGAGACAATAGAGTGTCATATGTGAACCCCATAGCTGCATCACGGGCCAAGGGACCTGCACCCAACGCAGGACCGTCTATCCAGGATTACCTGAGCAGACCACGGCCAACATGGGAAGAGGTGAAAGAGATCATCGAGAGGAAGAAGAAAGGCTCCAGAGCTCTGGCGGACTTTGAGGATCAAATGAACGAGAATTGGAAGAAAGAGCTGGCGAAGAACAGAGAGAAGTTACTGGGTGGCGTTgacaaggagaaagaggagaaggagaagaaggagaaggagaagagagagaagaaggagaagaaagagAAAaagaagaaagagaaggggaAAAAAGAAAAGGGAAAGAAATCCAACAGGcattcctctccctcctcctcctcatcgaGTTCTGATTCCTCTAGCAGCTCCTCCTCAGACTCTGAAGACGAGAATGAAAAGAAGAGTGTCAAAAAGAAACGTAAAAAGAAGCGGTCCTCCTCCAAGAAAGCATCAGAAGACTCGACTGTAGAATCGGAGCCCGACAGCAAGAcgaagatggagatggagatgaagaAGAAAGAAAAGGATGAAAAGAGCCGCAGGAAGAAGAGGAAAGCCGAGCAAAGTCATAAAGACTCATCCTCGGAGTCGTCAGCTGACTCAGAAGTGGAGGAGGGTGGTGAAGccaagaagagaaagagaagtaaTGAGGAGAAAGAAAAAATAGCAGCAGACAAATCAAAGAAGAAGAGGAAAAAGAAGCACAAGAAACATggcaggaagaagaagaagaagacctcTTCTGACGTTGAGTTAGACTAACATCTAGCGCTGTGGTTCTCTGTCCAACTGTCCACCACTAGAGAGCATCTGCCTTTCCACTACCAAAAAAATCCCATCTAGGCTGCTCCCATGATGGGGGTAGTTGATGGATTAGGGGAACCGCTAGCGTTCTGCTCATGAGAGTTGAGATGGTGGGGAGATGGGATATGGGGTTTCTAATGTTAATTAAGGACTGGTGAACTGGGAGTTACGGGTCATCAAACCCTCTGTGACAACTTTGcatatttgtttttcttttgTCTGTTGCTAGTTTTTATTAGATCCAAATGAACGTCGTCAAGGACACCATAAGTCGTCGTCAAGGACACCATAAGTCTGTCAAGTGTGGCCCAACTGAACTGAAACATTTGCATATGAAATGAAAATGAACTTCCATACATGGATATTGATCAGCAGTGTACATTTTTTACACCTTTGGTATGCTGCCCTGCTATGTCTATTTTACCATTCTTGGAGATCTCGTGCATTACTAGCTACACTGAGGTCATTTTGGGACTTTGTTATGCTGGTGCCCAGTGTCATGATGCATGCATTCTGATATGATGGTCACTTCTCTTGCCAGCCTCATATTGAAGTTGGGATTGTGAAAATATGAGTGAAATTGTCATTATCACAAGGGATAAACTGTTCAATTCTGTTAATGTAATGAATTCTACAACTGAATATCTATAAATGAATGGGTTTTAATTATTAAAGTATTGTTTTATCCTTGATAA
>XM_021559982.2
TCACAGGTCTGTGTGTTCGTCGTAGTCAGAGAATCTAGCTACGTAGCTAGAGAAGCTCGCTTGTTGTGGTGGCTAACGACGGGAAGCATGCTACGGTTCTCAATTTAGTGATATTCGCCCAATAGTAGGCGAAATCTGCAGAAATGGGGAAAAGAGACAATAGAGTGTCATATGTGAACCCCATAGCTGCATCACGGGCCAAGGGACCTGCACCCAACGCAGGACCGTCTATCCAGGATTACCTGAGCAGACCACGGCCAACATGGGAAGAGGTGAAAGAGATCATCGAGAGGAAGAAGAAAGGCTCCAGAGCTCTGGCGGACTTTGAGGATCAAATGAACGAGAATTGGAAGAAAGAGCTGGCGAAGAACAGAGAGAAGTTACTGGGTGGCGTTgacaaggagaaagaggagaaggagaagaaggagaaggagaagagagagaagaaggagaagaaagagAAAaagaagaaagagaaggggaAAAAAGAAAAGGGAAAGAAATCCAACAGGcattcctctccctcctcctcctcatcgaGTTCTGATTCCTCTAGCAGCTCCTCCTCAGACTCTGAAGACGAGAATGAAAAGAAGAGTGTCAAAAAGAAACGTAAAAAGAAGCGGTCCTCCTCCAAGAAAGCATCAGAAGACTCGACTGTAGAATCGGAGCCCGACAGCAAGGGCTCCTTCCCTCTCATTCTGTTTCTCTCCAAGAAGAcgaagatggagatggagatgaagaAGAAAGAAAAGGATGAAAAGAGCCGCAGGAAGAAGAGGAAAGCCGAGCAAAGTCATAAAGACTCATCCTCGGAGTCGTCAGCTGACTCAGAAGTGGAGGAGGGTGGTGAAGccaagaagagaaagagaagtaaTGAGGAGAAAGAAAAAATAGCAGCAGACAAATCAAAGAAGAAGAGGAAAAAGAAGCACAAGAAACATggcaggaagaagaagaagaagacctcTTCTGACGTTGAGTTAGACTAACATCTAGCGCTGTGGTTCTCTGTCCAACTGTCCACCACTAGAGAGCATCTGCCTTTCCACTACCAAAAAAATCCCATCTAGGCTGCTCCCATGATGGGGGTAGTTGATGGATTAGGGGAACCGCTAGCGTTCTGCTCATGAGAGTTGAGATGGTGGGGAGATGGGATATGGGGTTTCTAATGTTAATTAAGGACTGGTGAACTGGGAGTTACGGGTCATCAAACCCTCTGTGACAACTTTGcatatttgtttttcttttgTCTGTTGCTAGTTTTTATTAGATCCAAATGAACGTCGTCAAGGACACCATAAGTCGTCGTCAAGGACACCATAAGTCTGTCAAGTGTGGCCCAACTGAACTGAAACATTTGCATATGAAATGAAAATGAACTTCCATACATGGATATTGATCAGCAGTGTACATTTTTTACACCTTTGGTATGCTGCCCTGCTATGTCTATTTTACCATTCTTGGAGATCTCGTGCATTACTAGCTACACTGAGGTCATTTTGGGACTTTGTTATGCTGGTGCCCAGTGTCATGATGCATGCATTCTGATATGATGGTCACTTCTCTTGCCAGCCTCATATTGAAGTTGGGATTGTGAAAATATGAGTGAAATTGTCATTATCACAAGGGATAAACTGTTCAATTCTGTTAATGTAATGAATTCTACAACTGAATATCTATAAATGAATGGGTTTTAATTATTAAAGTATTGTTTTATCCTTGATAA

Function

symbol description
fam133b Orthologous to several human genes including FAM133B (family with sequence similarity 133 member B).

NR:

description
protein FAM133B isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559983.2 False 1694 mRNA 0.44 11 17368768 17374337
XM_021559982.2 True 1729 mRNA 0.44 11 17368769 17374337

Neighbor

gene id symbol gene type direction distance location
LOC110488025 cdk6 coding upstream 8609 17294343 ~ 17364119 (+)
calcr LOC106588943 coding upstream 413198 16846734 ~ 16955570 (+)
LOC110488022 tfpi2 coding upstream 534116 16827065 ~ 16834652 (+)
LOC110488019 LOC106570458 coding upstream 581929 16785333 ~ 16788539 (+)
LOC110488017 LOC106570464 coding upstream 731879 16603599 ~ 16639641 (+)
LOC110488030 LOC106588950 coding downstream 5832 17380169 ~ 17388113 (+)
pex1 pex1 coding downstream 19017 17393354 ~ 17421512 (+)
clcc1 LOC106570443 coding downstream 330152 17704489 ~ 17713221 (+)
LOC110488036 LOC106570445 coding downstream 388669 17763006 ~ 17784596 (+)
LOC110488037 LOC106570446 coding downstream 413440 17787777 ~ 17812354 (+)
G2302297 NA non-coding upstream 1992 17365053 ~ 17366776 (+)
G2302330 NA non-coding upstream 38968 17329588 ~ 17329800 (+)
G2302329 NA non-coding upstream 39621 17328706 ~ 17329147 (+)
G2302327 LOC100194703 non-coding upstream 41423 17327047 ~ 17327345 (+)
G2302298 NA non-coding downstream 75326 17449663 ~ 17454026 (+)
G2302417 NA non-coding downstream 161307 17535644 ~ 17537114 (+)
G2302427 NA non-coding downstream 196614 17570951 ~ 17572613 (+)
G2302430 NA non-coding downstream 201869 17576206 ~ 17576594 (+)
G2302462 rp9 non-coding downstream 295914 17670251 ~ 17671322 (+)
G2301841 NA other upstream 175651 17186565 ~ 17193117 (+)
G2301522 LOC106570460 other upstream 692097 16669607 ~ 16693934 (+)
G2303854 hsf1b other downstream 1403008 18777345 ~ 18783027 (+)
LOC110488049 recql4 other downstream 1627005 18998633 ~ 19016439 (+)
dgat1a LOC106570407 other downstream 1979874 19354178 ~ 19379095 (+)
G2304678 NA other downstream 2453880 19828217 ~ 19829961 (+)
G2305956 NA other downstream 3178996 20553333 ~ 20553684 (+)

Expression


Co-expression Network