stpg1 (stpg1)


Basic Information

Item Value
gene id stpg1
gene name stpg1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 21397320 ~ 21403121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560061.2
GTTTACTCGCTGTCATGGCAACATATCATATGCGGAAACACTGTATCCTCACTCAGAAATGTGTTTCTGGCTACTGTGACAGCAGTTTGATTGTCAGGCGGTGCAAATGCATCGGGCACCTGTACCTCCAGTTGTGTTGAATGTCTCTTAGCTAATGATGGGCAAAATACACAAAGGATTGAATGACAGCTGCAAACTTCCAGGATACATATCATCAATACCCACCAAATACCAAATAGTGGTGATAAGCAATGAGGATAAGAAAGGGTTCTTGTCACAAGCTAAGAGGTTCCTTTCAGAAGACAGTCAGAATGAAAACCCAGGGCCAGGCACATATATGTCTCACAGGCCTGCTGAAATCAGCAGCCCCTCCTTCTCAAAGAAAGGTACAGGAGGCTTTGCATCCCAGGCTGTCAGAGTTCCCCGTAACCCTCAGAGAGGTATCCCAGGACCAAATGTCTATAACCTGCAGTCCTCTCTGATCCACAAACACAGCTTTGGCAGGGGAGGCTCCAGAACTTTCCGACTACCAGTGGCTGTACAACATGATGGCCCTAAGAACAAGACACCAGCCCCTAATCAATATCATGTGTCTTTCAATGGGGTAAAGCCAAACACGTTAGTGTCCGCTCAATCAGTATTTCTGTCAACAACTGGACGGAGTTCTATGTGCTCAAACACTCTAAAAGGACCATCGCCATGTCACTACAAAGTCAATGATGCCATAACTCAGAAATGCCCCAAGGTTCCCCTCTCCTGCTTTAAGTCCAACTCTGTGAGGATCCAGTCCCCTGTGAATAACCATGTCCCAGGCCCAGGCACCTATAGTCCCTACCAGGCCCCAGAGCCAGTCAGGAGAACCATCCTACCGAGGAGACATTACCTGGGAATATCAGCTCCCCCTCTGATTCTTCTGAAGAACCCTCCCCTGCCTGGCCCTGGGCAGTATGATGTAGTGAACTATGGAGACCCGACCAAGCACTTCATGTCCAGTGCCGTGTTTGTTTCTGGGACAAGCCGTTGGACCCAGGATGTGCGCGGCCAAGGAGTTCCAGGGCCAGGTTACTATGAACCAGACACATCATCAAAGCGGTCTTTCTTATACAATTACTCCAACAACTGGATTCCAGCATGAAGCACTTGAGGCAACTCACATTGCTTTTGTGTGGCTGTTTTTGCATGTGTTCACACCACACTGGGCATATATTTACTAGTGTACTTTATGTGGAATTGTATTGTGGTTGAGTGGCTTGGTGTGGGAGTTTGTTTCTGCATGTAAGGAAGGTTTTGTACAATGTTTTCATGTGCATTCCATGTACTGTACGCATGTGTTTCACTGTGACTAAAGAGAAAGATACAAATCACTTCATATTTCCATCTATTCAGTAATTGTATTTCcaatacagtgtcttcagaaagcattcataccccttgacttattccacattttgttgtgttacagcctcaattcaaaatggattagatTCCATTTGTTCCACTtccaactacacacaataccccataatgacaaattaaatccatgtttttagaaattttacctaatgtattgaaaataaaacagaaatatcttaa
>XM_021560062.2
ATATGCGGAAACACTGTATCCTCACTCAGAAATGTGTTTCTGGCTACTGTGACAGCAGTTTGATTGTCAGGCGGTGCAAATGCATCGGGCACCTGTACCTCCAGTTGTGTTGAATGTCTCTTAGCTAATGATGGGCAAAATACACAAAGGATTGAATGACAGCTGCAAACTTCCAGGATACATATCATCAATACCCACCAAATACCAAATAGTGGTGATAAGCAATGAGGATAAGAAAGGGTTCTTGTCACAAGCTAAGAGGTTCCTTTCAGAAGACAGTCAGAATGAAAACCCAGGGCCAGGCACATATATGTCTCACAGGCCTGCTGAAATCAGCAGCCCCTCCTTCTCAAAGAAAGGCTGTCAGAGTTCCCCGTAACCCTCAGAGAGGTATCCCAGGACCAAATGTCTATAACCTGCAGTCCTCTCTGATCCACAAACACAGCTTTGGCAGGGGAGGCTCCAGAACTTTCCGACTACCAGTGGCTGTACAACATGATGGCCCTAAGAACAAGACACCAGCCCCTAATCAATATCATGTGTCTTTCAATGGGGTAAAGCCAAACACGTTAGTGTCCGCTCAATCAGTATTTCTGTCAACAACTGGACGGAGTTCTATGTGCTCAAACACTCTAAAAGGACCATCGCCATGTCACTACAAAGTCAATGATGCCATAACTCAGAAATGCCCCAAGGTTCCCCTCTCCTGCTTTAAGTCCAACTCTGTGAGGATCCAGTCCCCTGTGAATAACCATGTCCCAGGCCCAGGCACCTATAGTCCCTACCAGGCCCCAGAGCCAGTCAGGAGAACCATCCTACCGAGGAGACATTACCTGGGAATATCAGCTCCCCCTCTGATTCTTCTGAAGAACCCTCCCCTGCCTGGCCCTGGGCAGTATGATGTAGTGAACTATGGAGACCCGACCAAGCACTTCATGTCCAGTGCCGTGTTTGTTTCTGGGACAAGCCGTTGGACCCAGGATGTGCGCGGCCAAGGAGTTCCAGGGCCAGGTTACTATGAACCAGACACATCATCAAAGCGGTCTTTCTTATACAATTACTCCAACAACTGGATTCCAGCATGAAGCACTTGAGGCAACTCACATTGCTTTTGTGTGGCTGTTTTTGCATGTGTTCACACCACACTGGGCATATATTTACTAGTGTACTTTATGTGGAATTGTATTGTGGTTGAGTGGCTTGGTGTGGGAGTTTGTTTCTGCATGTAAGGAAGGTTTTGTACAATGTTTTCATGTGCATTCCATGTACTGTACGCATGTGTTTCACTGTGACTAAAGAGAAAGATACAAATCACTTCATATTTCCATCTATTCAGTAATTGTATTTCcaatacagtgtcttcagaaagcattcataccccttgacttattccacattttgttgtgttacagcctcaattcaaaatggattagatTCCATTTGTTCCACTtccaactacacacaataccccataatgacaaattaaatccatgtttttagaaattttacctaatgtattgaaaataaaacagaaatatcttaa
>XM_021560063.2
ATGCGGAAACACTGTATCCTCACTCAGAAATGTGTTTCTGGCTACTGTGACAGCAGTTTGATTGTCAGGCGGTGCAAATGCATCGGGCACCTGTACCTCCAGTTGTGTTGAATGTCTCTTAGCTAATGATGGGCAAAATACACAAAGGATTGAATGACAAATGAAAACCCAGGGCCAGGCACATATATGTCTCACAGGCCTGCTGAAATCAGCAGCCCCTCCTTCTCAAAGAAAGGTACAGGAGGCTTTGCATCCCAGGCTGTCAGAGTTCCCCGTAACCCTCAGAGAGGTATCCCAGGACCAAATGTCTATAACCTGCAGTCCTCTCTGATCCACAAACACAGCTTTGGCAGGGGAGGCTCCAGAACTTTCCGACTACCAGTGGCTGTACAACATGATGGCCCTAAGAACAAGACACCAGCCCCTAATCAATATCATGTGTCTTTCAATGGGGTAAAGCCAAACACGTTAGTGTCCGCTCAATCAGTATTTCTGTCAACAACTGGACGGAGTTCTATGTGCTCAAACACTCTAAAAGGACCATCGCCATGTCACTACAAAGTCAATGATGCCATAACTCAGAAATGCCCCAAGGTTCCCCTCTCCTGCTTTAAGTCCAACTCTGTGAGGATCCAGTCCCCTGTGAATAACCATGTCCCAGGCCCAGGCACCTATAGTCCCTACCAGGCCCCAGAGCCAGTCAGGAGAACCATCCTACCGAGGAGACATTACCTGGGAATATCAGCTCCCCCTCTGATTCTTCTGAAGAACCCTCCCCTGCCTGGCCCTGGGCAGTATGATGTAGTGAACTATGGAGACCCGACCAAGCACTTCATGTCCAGTGCCGTGTTTGTTTCTGGGACAAGCCGTTGGACCCAGGATGTGCGCGGCCAAGGAGTTCCAGGGCCAGGTTACTATGAACCAGACACATCATCAAAGCGGTCTTTCTTATACAATTACTCCAACAACTGGATTCCAGCATGAAGCACTTGAGGCAACTCACATTGCTTTTGTGTGGCTGTTTTTGCATGTGTTCACACCACACTGGGCATATATTTACTAGTGTACTTTATGTGGAATTGTATTGTGGTTGAGTGGCTTGGTGTGGGAGTTTGTTTCTGCATGTAAGGAAGGTTTTGTACAATGTTTTCATGTGCATTCCATGTACTGTACGCATGTGTTTCACTGTGACTAAAGAGAAAGATACAAATCACTTCATATTTCCATCTATTCAGTAATTGTATTTCcaatacagtgtcttcagaaagcattcataccccttgacttattccacattttgttgtgttacagcctcaattcaaaatggattagatTCCATTTGTTCCACTtccaactacacacaataccccataatgacaaattaaatccatgtttttagaaattttacctaatgtattgaaaataaaacagaaatatcttaa
>XM_036970649.1
GTCTCTTAGCTAATGATGGGCAAAATACACAAAGGATTGAATGACAAATGAAAACCCAGGGCCAGGCACATATATGTCTCACAGGCCTGCTGAAATCAGCAGCCCCTCCTTCTCAAAGAAAGGCTGTCAGAGTTCCCCGTAACCCTCAGAGAGGTATCCCAGGACCAAATGTCTATAACCTGCAGTCCTCTCTGATCCACAAACACAGCTTTGGCAGGGGAGGCTCCAGAACTTTCCGACTACCAGTGGCTGTACAACATGATGGCCCTAAGAACAAGACACCAGCCCCTAATCAATATCATGTGTCTTTCAATGGGGTAAAGCCAAACACGTTAGTGTCCGCTCAATCAGTATTTCTGTCAACAACTGGACGGAGTTCTATGTGCTCAAACACTCTAAAAGGACCATCGCCATGTCACTACAAAGTCAATGATGCCATAACTCAGAAATGCCCCAAGGTTCCCCTCTCCTGCTTTAAGTCCAACTCTGTGAGGATCCAGTCCCCTGTGAATAACCATGTCCCAGGCCCAGGCACCTATAGTCCCTACCAGGCCCCAGAGCCAGTCAGGAGAACCATCCTACCGAGGAGACATTACCTGGGAATATCAGCTCCCCCTCTGATTCTTCTGAAGAACCCTCCCCTGCCTGGCCCTGGGCAGTATGATGTAGTGAACTATGGAGACCCGACCAAGCACTTCATGTCCAGTGCCGTGTTTGTTTCTGGGACAAGCCGTTGGACCCAGGATGTGCGCGGCCAAGGAGTTCCAGGGCCAGGTTACTATGAACCAGACACATCATCAAAGCGGTCTTTCTTATACAATTACTCCAACAACTGGATTCCAGCATGAAGCACTTGAGGCAACTCACATTGCTTTTGTGTGGCTGTTTTTGCATGTGTTCACACCACACTGGGCATATATTTACTAGTGTACTTTATGTGGAATTGTATTGTGGTTGAGTGGCTTGGTGTGGGAGTTTGTTTCTGCATGTAAGGAAGGTTTTGTACAATGTTTTCATGTGCATTCCATGTACTGTACGCATGTGTTTCACTGTGACTAAAGAGAAAGATACAAATCACTTCATATTTCCATCTATTCAGTAATTGTATTTCcaatacagtgtcttcagaaagcattcataccccttgacttattccacattttgttgtgttacagcctcaattcaaaatggattagatTCCATTTGTTCCACTtccaactacacacaataccccataatgacaaattaaatccatgtttttagaaattttacctaatgtattgaaaataaaacagaaatatcttaa

Function

symbol description
stpg1 Predicted to enable chromatin binding activity and histone binding activity. Predicted to be involved in DNA demethylation of male pronucleus and positive regulation of DNA demethylation. Predicted to act upstream of or within apoptotic process. Predicted to be located in cytoplasm and nucleus. Predicted to be active in female pronucleus; germinal vesicle; and male pronucleus. Orthologous to human STPG1 (sperm tail PG-rich repeat containing 1).

NR:

description
O(6)-methylguanine-induced apoptosis 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560061.2 False 1593 mRNA 0.45 9 21397320 21403121
XM_021560062.2 False 1543 mRNA 0.45 9 21397347 21403121
XM_021560063.2 False 1442 mRNA 0.45 8 21397349 21403121
XM_036970649.1 True 1306 mRNA 0.45 7 21397716 21403121

Neighbor

gene id symbol gene type direction distance location
LOC110488077 fhl3 coding upstream 9241 21358261 ~ 21388079 (+)
LOC110488075 LOC106570373 coding upstream 43076 21349951 ~ 21354244 (+)
LOC110489444 LOC105012574 coding upstream 60176 21334316 ~ 21337707 (+)
LOC100499586 LOC100499586 coding upstream 68598 21326921 ~ 21328722 (+)
LOC110488073 NA coding upstream 76925 21312509 ~ 21320395 (+)
map7d1b NA coding downstream 6892 21410013 ~ 21458853 (+)
thrap3b thrap3 coding downstream 59100 21462221 ~ 21500971 (+)
LOC110488083 LOC106570366 coding downstream 110168 21513289 ~ 21515234 (+)
LOC110489402 LOC106570389 coding downstream 124463 21527584 ~ 21530592 (+)
LOC110488087 zc3h12a coding downstream 132484 21535605 ~ 21547883 (+)
G2306716 NA non-coding upstream 40394 21356713 ~ 21356926 (+)
G2306685 NA non-coding upstream 40884 21355058 ~ 21356436 (+)
G2306687 NA non-coding upstream 42394 21354346 ~ 21354926 (+)
G2306706 NA non-coding upstream 72548 21324312 ~ 21324772 (+)
G2306732 NA non-coding downstream 1708 21404829 ~ 21405300 (+)
G2306790 NA non-coding downstream 122321 21525442 ~ 21525891 (+)
LOC110488088 LOC106570364 non-coding downstream 152314 21555375 ~ 21560635 (+)
G2306808 NA non-coding downstream 163507 21566628 ~ 21566950 (+)
G2306810 NA non-coding downstream 168320 21571441 ~ 21571846 (+)
G2306688 NA other upstream 73424 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 85442 21307432 ~ 21311878 (+)
G2306173 LOC106570399 other upstream 583022 20813189 ~ 20814298 (+)
G2305956 NA other upstream 843636 20553333 ~ 20553684 (+)
G2304678 NA other upstream 1567359 19828217 ~ 19829961 (+)
G2306825 NA other downstream 183967 21587088 ~ 21587434 (+)
c32h5orf49 cssa14h5orf49 other downstream 1002896 22405971 ~ 22416346 (+)
G2308224 NA other downstream 1201199 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 2576229 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 2748566 24151527 ~ 24157473 (+)

Expression


Co-expression Network