tmem170b (LOC106570362)


Basic Information

Item Value
gene id tmem170b
gene name LOC106570362
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 21677669 ~ 21690701 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560094.2
TGGTGACGGCCCCTTTAAGGGTTATGTAGAGAGAAGGGCTGATGTAGGACGACTCCTCTGTGTGCGCTGCCATCCTCATCATGGCCTCCAAACAACCGCCGCTGCTACCGAGAATGAGCACGAGCAGACGAGCTGTTGGCCCTTTCCTTCCCCGCGCGGAGACCAACAACGTTAAGCCGAAACAGAGGCACCGGTAGAGGGGTGCGCGCCGGGGGATCAAGCCTCCGAGCTCATGCCACCCCGTTCTCTTCGATGTCTTCGTCAAAAGCCACTTACAGCCATTTGTCAAAGAGGGATGCAAACCCGGGCGGCGGCAGAAACATGAACACGAATAGGGATTATTCTATCAATCTATCCGTGCAGCAAGTGCTGAGCCTCTGGGTGCAAGGCACGACGCTGCAACATTTCACAGAGATGTGGTACTGGGTGTTCCTGTGGTGTCTTTTCTCCTCGCTCTTCGTCCACGGGGCAATGGGCCTGCTCATGTTAGTCATGCTGCAGCGCCACAAGAGGGGTCGCCTCATCACCCTGGTCCTGGTCAGCGTGGGCTTCCTGGCCTCCTTGGCCGGTGGGGTCATCACCAGTGCGGCCGTGGCAGGGGTGTATCGTGTGGCAGGGAAGGACATGGCCCCCCTCCAGGCCCTGGTGTTTGGAGTGGGCCAGACCACACTCTCTGTAGTCATCTCCTTCTCACGTATACTGGCCACTCTCTGAAGAGATGACTCTGCTACACGGACAGACTCACTGACGAACAGACacacaagagaggagagaggaaaggggaagggAGGGACATCCCACCAGTTACACAAGCAGAGACGGCAATGGGTGGCAGTTAACTGCATGTAGTATTTGAAGGAAAACAAACAGTCAAATAGAAGAAGTGAAGAAGACGGTGTCCCAGTCCTAGACGTCTAGACATTTGGGGATGGATGAATGTGGAAGAGTGCCGCCTAGTGTCTCTGTTCAGCCACTGCTACGTTTGCTAGAGCTCCCTTTGCTACAAGGGACCTCTCAATGCAGGCCTCACTTCTGTGTGTCAAAGACACACACTTCCTTGGGCTCTCCACCAGTTGGCGATGTCCACAGACTCTGTCAAGTGTCAAGCCAGTGAAACCACATCCTGAACTGAAAGCTAATTTGAGGTTCTATGTGCCGATGTCCTTTGGGACTTAACTTCAGTGTTGTAAAGGGGAATGCTTTCATGGCCATCTCTACAGACGGTTGAAGGCTTTCTGTTCTATTTGTGGGGGGGAActccacatttttttttacagtaaagaCAAACCACAGCAACCTGTAATTAATTGAACAATTCAAGTCTACGGTCCTTGAAGTGCCACGGTACTTTGATGAGATGGCCAGAACAAAATTGGACCTGTGAAGACCCACCATCATTCTGACATGCCTGAGAGGTTGTAAACGCAACGATGATGGTCAACCAAACTACCATTCAGTGTTAAAAAAATCTACCAACCACAAACAACTGGATCTTCTGTCCTTGGAAACTGATATCCTAATAACCATTCCTTCTTGTAAAGTATTCTAACTACCACAGCAGGTTTTTTGTTTGCAACAATCCATAATGCTTAACCTTTGCACTTTCTAAATGTTGGTGATCCACCTCCTTTACCTAAGAGGTGTCTAAATAGAGTAGGTTGTTGAGGTTCCGTTGGTTCAAAGTTACTATGGAGATAACCACTACGCTTGTTAAGGGCTCTGCATACGCAAACGGAGCTGACGTAGGTCCATCATTTGCGTTGACAGTGTAGAGCCCTTTAGATATTTGTCAAGTCTAGACCAGTCCAGGTTGTCCAACGTACTCTGGGGAAATAGCAACTCTGACCATGAACCTTGTCTGGAGAGGGTCAGAGTTGCTACTTGGTTCTTACAGGGTTTTATGGAGGTAAACTAATGTATTAACTGAAGTACAAAGAAAGAATTGTcctagtagtagcagctgtattGCTTCTTGAGGAATATCTCTGATAGAGTATCTCTTGGAAGTTTTACTGTCTGTGTTGTGGTGCAGATTTACTGTTAAGGTTTAGCGGTTGGAATCCAGCTGCTACTTGGCTGTTGTGATAACAATGTTGTCCTGACTCCTATAAATCCCACTCCATAGAGAGCCATTcctggagaaggtcagagacttagtgtgcatcccaaatggtaccctctccctatatagtacactgcttttgaccagggtcaataggactgtatagggaatagggtgccatttgggaagcatccTCTACTGCTGCTGAAACAGCCATTTTCTATGGctccctgccttcctccctgTTAGTTCTTGCTAATCGTGTGTGTATTGTTTGTGTTTTAACTAAGTTTGACTTTGCATATTGCACTGACAACGGCCTGCCTTTATTTCGCACAGTTTGTTTTATGATATTGGTCCCAGTGGGTGACCCATAGATCCATAGGATTTTATACAGTATGTCCCATCACCAGTACACACAGTGGGTCCCAAAAAGCAGGTttttgtccaaaatggcaccctgtgcCCTTCATAGTGCACCCTTTTTTGACCGTAGCCATATGGGTTTGAGAAGCACTGCTGTGGTTTTGGAGGTGCTTTTGGGACTGcagagcaatgttttttttgtggggCCCTGTGGGACTAACCATAAtgaatgtgtttgtgtctgtcctGTCCACCCTCTGGAACAGTTCACATTTATTAACCAACTATAGGACAGGTcttactgcatcccaaatggcactatgtTCCCTACaatgtgcactacttttcaccagagccctatgggggaaTTTGGGACGCACACATTCACTCCTGGAATTGAAGGGTTGCAAGGCCCACTGGTTTGTACCTTACAATGTCATTCATTTTTTATCAATAGCTGACGATATCCCATCTCTCAGTCACTTTCATTTGTCAGTAAATGACTGTGGACCAATAAAACAAGGCCCTCTGCTGCACCCTAAACTAGTTGTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGTTGTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGTTGTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGTTGTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGTTTTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGTTGTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGTTGTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGTTGTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGTTGTGAATACCACACTAGGCCCTCTGCTGCACTCTAAACTAGGTGTGAATACCACACCAGGCCCTCTGCTGCACCCTAAACTAGGTGTGAATACCACACCAGGCCCTCTCTGGAAACAAAGGGTTTGTTTTTATGCCAAAGGACTTCATTCTCACATGTTAGCTTTATTTGTTAAGGGTTCCTTATTTTTTGATTGTTGTTATTATTGCTGAGAAAGTATGAATCGCTTTAATTTCAGAACCATTATTTTGCACTGAGCTAAACAGATTTAAAATCCCCAAACCCACAAAAAGTTAACAAAATTTGCTTCATTTTGGCTTAATATAAAATTCCAGTGTGTGACCTAATTGAGTGATCTAAGAGTGTTTACCAATGAAAGTGATTGCTCTGTTTTTTCCTTAGTTATGTAATTGACACCACTCACCTTCAATACCCAGTCTGCGCACCAGAGGGAGCCAGTACGCTGAGTATTGAATAAGTGATAGTAGTAGCCAGTGTCAGTGGTGGATTTGGATTGATACAGTAATGATCGTGGTTGTTGTATAGAAGAAAATATACCTGTGGCAGTTTTTTGATATGGTCAATTTGTATTTGATTCTAAAATGAATTCCTGAGGCTTCCAGATGGTCTGGAAACGACTGTGTTTGATAATTTGCCTAATCTAATATGACTATCCAATACTATCTCTCTCAGTACTCTCTGATTAAAGAAAATACTTGGATAAAACAAACTATAATCAGCAAATACTATTAATGATCAAATTCCCCAGATCAACTGAATTCATTTTGTATTAGTAAGTTATTACACTCATTTTAATATTTTTGGCTCGAGTTCGGAGACCAAATGTGAGTTATTTCTGATGGCTCTACAATGCTGTCATAGCGATATTATCTAGATATTTCTGTTTGTGAATGAAACTGCGTTTGAGAGTTGGATATGGTGCATAGGACTTGTGACAAGAGTGTTGTTGtgtgatgttgtactgtatgtctgtgtggttgtatATGTGAGTGTTATAACAGGcattaacttgttttttttttcagaaGGGGCCTGCATTACAATTGTCATTGCAGCATCTGAAATGCTTTATCGAGTTGAGCAAAAGGGGTAAGGACCTTGTCATAGGTGTAACACTGACTGACCCAGTGTGTTCAGAAATGTTGTCTTACTGAGCAATGTCTTACATAATGTGTTTTtaaaatctttaaaaaataat

Function

NR:

description
transmembrane protein 170B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560094.2 True 4530 mRNA 0.45 3 21677669 21690701

Neighbor

gene id symbol gene type direction distance location
LOC110488088 LOC106570364 coding upstream 119404 21555375 ~ 21560635 (+)
LOC110488087 zc3h12a coding upstream 129786 21535605 ~ 21547883 (+)
LOC110489402 LOC106570389 coding upstream 147077 21527584 ~ 21530592 (+)
LOC110488083 LOC106570366 coding upstream 162435 21513289 ~ 21515234 (+)
thrap3b thrap3 coding upstream 176698 21462221 ~ 21500971 (+)
hivep1 LOC106570361 coding downstream 52346 21743047 ~ 21829048 (+)
edn1 LOC106570392 coding downstream 145607 21836308 ~ 21839826 (+)
LOC110488094 LOC106570360 coding downstream 257683 21948384 ~ 21950989 (+)
LOC118946490 NA coding downstream 358453 22049096 ~ 22050469 (+)
LOC110488097 LOC106570356 coding downstream 421329 22112030 ~ 22130041 (+)
G2306892 NA non-coding upstream 2388 21674986 ~ 21675281 (+)
G2306890 NA non-coding upstream 6280 21671151 ~ 21671389 (+)
G2306886 NA non-coding upstream 10322 21667135 ~ 21667347 (+)
G2306850 NA non-coding upstream 51391 21626078 ~ 21626278 (+)
G2306843 NA non-coding upstream 62516 21614873 ~ 21615153 (+)
G2306912 NA non-coding downstream 11004 21701705 ~ 21702152 (+)
G2307767 NA non-coding downstream 484292 22174993 ~ 22175406 (+)
G2307792 NA non-coding downstream 535585 22226286 ~ 22230151 (+)
G2307779 LOC106570344 non-coding downstream 566435 22257136 ~ 22259964 (+)
G2306825 NA other upstream 90235 21587088 ~ 21587434 (+)
G2306688 NA other upstream 353773 21320623 ~ 21323896 (+)
LOC110488072 LOC106570395 other upstream 365791 21307432 ~ 21311878 (+)
G2306173 LOC106570399 other upstream 863371 20813189 ~ 20814298 (+)
G2305956 NA other upstream 1123985 20553333 ~ 20553684 (+)
c32h5orf49 cssa14h5orf49 other downstream 715316 22405971 ~ 22416346 (+)
G2308224 NA other downstream 913619 22604320 ~ 22604721 (+)
LOC110488133 NA other downstream 2288649 23979350 ~ 23981983 (+)
LOC110488142 LOC106570295 other downstream 2460986 24151527 ~ 24157473 (+)
G2311528 NA other downstream 4044493 25735194 ~ 25736847 (+)

Expression


Co-expression Network