Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110488129 |
| gene name | LOC106570314 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 23249638 ~ 23260973 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane protein 106B-like isoform X1 |
| id | description |
|---|---|
| K25048 | TMEM106B; transmembrane protein 106B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021560160.2 | False | 4085 | mRNA | 0.42 | 8 | 23249638 | 23260797 |
| XM_021560159.2 | True | 3160 | mRNA | 0.43 | 8 | 23249638 | 23260973 |
23,240,000
23,242,000
23,244,000
23,246,000
23,248,000
23,250,000
23,252,000
23,254,000
23,256,000
23,258,000
23,260,000
23,262,000
23,264,000
23,266,000
NC_050572.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488128 | LOC106570315 | coding | downstream | 7010 | 23227922 ~ 23242628 (-) |
| LOC110488126 | arl4a | coding | downstream | 23837 | 23222514 ~ 23225801 (-) |
| LOC110488123 | LOC106570320 | coding | downstream | 188210 | 23044620 ~ 23061428 (-) |
| LOC110488121 | LOC106570321 | coding | downstream | 220057 | 23017629 ~ 23029581 (-) |
| LOC110488119 | NA | coding | downstream | 258544 | 22989593 ~ 22991094 (-) |
| LOC110488132 | LOC106570309 | coding | upstream | 661756 | 23922729 ~ 23957990 (-) |
| umad1 | LOC106588684 | coding | upstream | 703826 | 23962314 ~ 23979279 (-) |
| LOC110488136 | LOC106570288 | coding | upstream | 770392 | 24031365 ~ 24042992 (-) |
| LOC110488134 | LOC106570288 | coding | upstream | 798434 | 24059407 ~ 24065425 (-) |
| asns | LOC106570297 | coding | upstream | 901246 | 24162219 ~ 24176944 (-) |
| G2308809 | NA | non-coding | downstream | 128652 | 23120766 ~ 23120986 (-) |
| G2308797 | NA | non-coding | downstream | 144575 | 23104858 ~ 23105063 (-) |
| G2308785 | NA | non-coding | downstream | 168861 | 23080538 ~ 23080777 (-) |
| G2308781 | NA | non-coding | downstream | 176741 | 23072531 ~ 23072897 (-) |
| G2308778 | NA | non-coding | downstream | 182983 | 23066116 ~ 23066655 (-) |
| G2310104 | NA | non-coding | upstream | 79346 | 23340319 ~ 23340531 (-) |
| G2310106 | NA | non-coding | upstream | 81221 | 23342194 ~ 23342403 (-) |
| G2310108 | NA | non-coding | upstream | 90029 | 23351002 ~ 23351233 (-) |
| G2310138 | NA | non-coding | upstream | 130930 | 23391903 ~ 23392272 (-) |
| G2310186 | NA | non-coding | upstream | 206322 | 23467295 ~ 23469809 (-) |
| LOC118946453 | NA | other | downstream | 265504 | 22979779 ~ 22984566 (-) |
| ndufs6 | LOC106570329 | other | downstream | 363716 | 22883692 ~ 22886170 (-) |
| LOC110489405 | LOC106570343 | other | downstream | 830300 | 22416566 ~ 22498043 (-) |
| LOC110488089 | LOC106570363 | other | downstream | 1660081 | 21566593 ~ 21613473 (-) |
| lsm10 | lsm10 | other | downstream | 1736175 | 21511423 ~ 21513463 (-) |
| G2310381 | LOC106570311 | other | upstream | 499542 | 23760515 ~ 23761351 (-) |
| G2310415 | NA | other | upstream | 555324 | 23816297 ~ 23818006 (-) |
| G2311141 | NA | other | upstream | 1901719 | 25162692 ~ 25163130 (-) |
| G2312079 | LOC106582599 | other | upstream | 2708010 | 25968983 ~ 25969361 (-) |
