umad1 (LOC106588684)


Basic Information

Item Value
gene id umad1
gene name LOC106588684
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 23962314 ~ 23979279 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971029.1
ACATAAgacacaataacaacaacacacggGCCTATGTCTAACTAGCTACACGAAATCGAAGTGAAATTGCATAGATCATCTAACAATAGCAACATTTTATGTTACTTTACTCAACTTTTTAAAGAAACCTAACACTGGCATAGTCCTAGGTTCTACATACATAAAGACAGCGTAAGGAGTCAAGTATGTTCAGTTTTTTCGGACATCGTAATAAAGACTCTTCCAAGAAGTCATCGTCAGAGGGGGATACAGATGGGTTCGTGATAATCGgAGAAACTGTTGAGGAACAGAGGCAGAAGATCCAAAACATCAGCAAACCATCATGTAACGTCATTGTGCAACCATCAAAGtcATCCAGTGCAACACCTTCCCAGGCCCACCACTCTCCAGCCCCCGCTCCACCTTCCGTGATCGCCCCATCACCAGGGCCCATGTGGAAGCCCCCTGCGCCCATCGTGGAGGCCCCACCGTCTCTCCCAGAGCTACTAGGAGATGTCCCGTTCACCCTGGCCCCCCATGTCCTGGCCATGCAGACAGGGGGTCCCGGGTTCCTCTTTTCTGAGATGCTGATGTCCCCCCGAGACATCAACCACAACCTGGCCTCCTTCACTTACGATTTCACCCTGGAGAACTCTGTGCTCTGTGACCATTGACCTGTCTACTTTCTGACtgtatgacctctgacctttttGATCTGTCAACCTCCTCCAATACCAACCCTTTGTCAaccctgggtcgtgttcattgggcagcaaacagaagaaaacatacTGAAACAGGGCGGGACATCCTGGGCTTGCCTAATAAGAaaggcacatttttgtttttagaGTTTAGCTACATGtgctctactgaacacaacctTGGACTGTCTTGTCTCGTTACCATTCAGGTTTAGTTTCAGTTCCATGGGGCTCTGTCTGAGAATGGCAATACTATAATTAATAATAAACCTGGTTCTGGTGATGATCAGCATTAGGTGGGGTCAAAACTGCACCTGCCTGCAGTGATGTAGGTACACACAGTATGTAGGTAGATGGGTACACAGAATTCCACCTTTTTAAGATTGCAGATTAGGAATACTAGTTAAGAATGTTAATCACTTGCTGATGCATGTCATAGTAGTGCTGGTTCACtgttttaagtgtgtgtgtgtgtgtcagaagagCGTTAGCTTCATGTCGGATGATAGGAATGCTTGAACATAGCTGAGGCTTGCGTTGAAGAACAGAGTCAGGGTCTAGATtcacctgctgttgttgttggtttAGGAATCACTGATTGACCTTTTGGGTTTGCACTAATGTACGTACCAGACAGATTTCAAATGGAATCTTAGGAAGGAAATGACTTCTTTATCTGGTTACGTTTTTTACCCTGGTGTCCTCACCTTTGCCAATGACGTTGAGAATATTTTAACAAGACATTTCCAAAAAA
>XM_036971030.1
ACATAAgacacaataacaacaacacacggGCCTATGTCTAACTAGCTACACGAAATCGAAGTGAAATTGCATAGATCATCTAACAATAGCAACATTTTATGTTACTTTACTCAACTTTTTAAAGAAACCTAACACTGACAGCGTAAGGAGTCAAGTATGTTCAGTTTTTTCGGACATCGTAATAAAGACTCTTCCAAGAAGTCATCGTCAGAGGGGGATACAGATGGGTTCGTGATAATCGgAGAAACTGTTGAGGAACAGAGGCAGAAGATCCAAAACATCAGCAAACCATCATGTAACGTCATTGTGCAACCATCAAAGtcATCCAGTGCAACACCTTCCCAGGCCCACCACTCTCCAGCCCCCGCTCCACCTTCCGTGATCGCCCCATCACCAGGGCCCATGTGGAAGCCCCCTGCGCCCATCGTGGAGGCCCCACCGTCTCTCCCAGAGCTACTAGGAGATGTCCCGTTCACCCTGGCCCCCCATGTCCTGGCCATGCAGACAGGGGGTCCCGGGTTCCTCTTTTCTGAGATGCTGATGTCCCCCCGAGACATCAACCACAACCTGGCCTCCTTCACTTACGATTTCACCCTGGAGAACTCTGTGCTCTGTGACCATTGACCTGTCTACTTTCTGACtgtatgacctctgacctttttGATCTGTCAACCTCCTCCAATACCAACCCTTTGTCAaccctgggtcgtgttcattgggcagcaaacagaagaaaacatacTGAAACAGGGCGGGACATCCTGGGCTTGCCTAATAAGAaaggcacatttttgtttttagaGTTTAGCTACATGtgctctactgaacacaacctTGGACTGTCTTGTCTCGTTACCATTCAGGTTTAGTTTCAGTTCCATGGGGCTCTGTCTGAGAATGGCAATACTATAATTAATAATAAACCTGGTTCTGGTGATGATCAGCATTAGGTGGGGTCAAAACTGCACCTGCCTGCAGTGATGTAGGTACACACAGTATGTAGGTAGATGGGTACACAGAATTCCACCTTTTTAAGATTGCAGATTAGGAATACTAGTTAAGAATGTTAATCACTTGCTGATGCATGTCATAGTAGTGCTGGTTCACtgttttaagtgtgtgtgtgtgtgtcagaagagCGTTAGCTTCATGTCGGATGATAGGAATGCTTGAACATAGCTGAGGCTTGCGTTGAAGAACAGAGTCAGGGTCTAGATtcacctgctgttgttgttggtttAGGAATCACTGATTGACCTTTTGGGTTTGCACTAATGTACGTACCAGACAGATTTCAAATGGAATCTTAGGAAGGAAATGACTTCTTTATCTGGTTACGTTTTTTACCCTGGTGTCCTCACCTTTGCCAATGACGTTGAGAATATTTTAACAAGACATTTCCAAAAAA
>XM_036971028.1
CCGGAAACACATAAgacacaataacaacaacacacggGCCTATGTCTAACTAGCTACACGAAATCGAAGTGAAATTGCATAGATCATCTAACAATAGCAACATTTTATGTTACTTTACTCAACTTTTTAAAGAAACCTAACACTGGTAAGGCATAGTCCTAGGTTCTACATACATAAAGACAGCGTAAGGAGTCAAGTATGTTCAGTTTTTTCGGACATCGTAATAAAGACTCTTCCAAGAAGTCATCGTCAGAGGGGGATACAGATGGGTTCGTGATAATCGgAGAAACTGTTGAGGAACAGAGGCAGAAGATCCAAAACATCAGCAAACCATCATGTAACGTCATTGTGCAACCATCAAAGtcATCCAGTGCAACACCTTCCCAGGCCCACCACTCTCCAGCCCCCGCTCCACCTTCCGTGATCGCCCCATCACCAGGGCCCATGTGGAAGCCCCCTGCGCCCATCGTGGAGGCCCCACCGTCTCTCCCAGAGCTACTAGGAGATGTCCCGTTCACCCTGGCCCCCCATGTCCTGGCCATGCAGACAGGGGGTCCCGGGTTCCTCTTTTCTGAGATGCTGATGTCCCCCCGAGACATCAACCACAACCTGGCCTCCTTCACTTACGATTTCACCCTGGAGAACTCTGTGCTCTGTGACCATTGACCTGTCTACTTTCTGACtgtatgacctctgacctttttGATCTGTCAACCTCCTCCAATACCAACCCTTTGTCAaccctgggtcgtgttcattgggcagcaaacagaagaaaacatacTGAAACAGGGCGGGACATCCTGGGCTTGCCTAATAAGAaaggcacatttttgtttttagaGTTTAGCTACATGtgctctactgaacacaacctTGGACTGTCTTGTCTCGTTACCATTCAGGTTTAGTTTCAGTTCCATGGGGCTCTGTCTGAGAATGGCAATACTATAATTAATAATAAACCTGGTTCTGGTGATGATCAGCATTAGGTGGGGTCAAAACTGCACCTGCCTGCAGTGATGTAGGTACACACAGTATGTAGGTAGATGGGTACACAGAATTCCACCTTTTTAAGATTGCAGATTAGGAATACTAGTTAAGAATGTTAATCACTTGCTGATGCATGTCATAGTAGTGCTGGTTCACtgttttaagtgtgtgtgtgtgtgtcagaagagCGTTAGCTTCATGTCGGATGATAGGAATGCTTGAACATAGCTGAGGCTTGCGTTGAAGAACAGAGTCAGGGTCTAGATtcacctgctgttgttgttggtttAGGAATCACTGATTGACCTTTTGGGTTTGCACTAATGTACGTACCAGACAGATTTCAAATGGAATCTTAGGAAGGAAATGACTTCTTTATCTGGTTACGTTTTTTACCCTGGTGTCCTCACCTTTGCCAATGACGTTGAGAATATTTTAACAAGACATTTCCAAAAAA
>XM_036971027.1
GACCGGAAACACATAAgacacaataacaacaacacacggGCCTATGTCTAACTAGCTACACGAAATCGAAGTGAAATTGCATAGATCATCTAACAATAGCAACATTTTATGTTACTTTACTCAACTTTTTAAAGAAACCTAACACTGGTAAGACAGCGTAAGGAGTCAAGTATGTTCAGTTTTTTCGGACATCGTAATAAAGACTCTTCCAAGAAGTCATCGTCAGAGGGGGATACAGATGGGTTCGTGATAATCGgAGAAACTGTTGAGGAACAGAGGCAGAAGATCCAAAACATCAGCAAACCATCATGTAACGTCATTGTGCAACCATCAAAGtcATCCAGTGCAACACCTTCCCAGGCCCACCACTCTCCAGCCCCCGCTCCACCTTCCGTGATCGCCCCATCACCAGGGCCCATGTGGAAGCCCCCTGCGCCCATCGTGGAGGCCCCACCGTCTCTCCCAGAGCTACTAGGAGATGTCCCGTTCACCCTGGCCCCCCATGTCCTGGCCATGCAGACAGGGGGTCCCGGGTTCCTCTTTTCTGAGATGCTGATGTCCCCCCGAGACATCAACCACAACCTGGCCTCCTTCACTTACGATTTCACCCTGGAGAACTCTGTGCTCTGTGACCATTGACCTGTCTACTTTCTGACtgtatgacctctgacctttttGATCTGTCAACCTCCTCCAATACCAACCCTTTGTCAaccctgggtcgtgttcattgggcagcaaacagaagaaaacatacTGAAACAGGGCGGGACATCCTGGGCTTGCCTAATAAGAaaggcacatttttgtttttagaGTTTAGCTACATGtgctctactgaacacaacctTGGACTGTCTTGTCTCGTTACCATTCAGGTTTAGTTTCAGTTCCATGGGGCTCTGTCTGAGAATGGCAATACTATAATTAATAATAAACCTGGTTCTGGTGATGATCAGCATTAGGTGGGGTCAAAACTGCACCTGCCTGCAGTGATGTAGGTACACACAGTATGTAGGTAGATGGGTACACAGAATTCCACCTTTTTAAGATTGCAGATTAGGAATACTAGTTAAGAATGTTAATCACTTGCTGATGCATGTCATAGTAGTGCTGGTTCACtgttttaagtgtgtgtgtgtgtgtcagaagagCGTTAGCTTCATGTCGGATGATAGGAATGCTTGAACATAGCTGAGGCTTGCGTTGAAGAACAGAGTCAGGGTCTAGATtcacctgctgttgttgttggtttAGGAATCACTGATTGACCTTTTGGGTTTGCACTAATGTACGTACCAGACAGATTTCAAATGGAATCTTAGGAAGGAAATGACTTCTTTATCTGGTTACGTTTTTTACCCTGGTGTCCTCACCTTTGCCAATGACGTTGAGAATATTTTAACAAGACATTTCCAAAAAA
>TU2642876
caacaacacacggGCCTATGTCTAACTAGCTACACGAAATCGAAGTGAAATTGCATAGATCATCTAACAATAGCAACATTTTATGTTACTTTACTCAACTTTTTAAAGAAACCTAACACTGACAGCGTAAGGAGTCAAGTATGTTCAGTTTTTTCGGACATCGTAATAAAGACTCTTCCAAGAAGTCATCGTCAGAGGGGGATACAGATGGGTTCGTGATAATCGtcATCCAGTGCAACACCTTCCCAGGCCCACCACTCTCCAGCCCCCGCTCCACCTTCCGTGATCGCCCCATCACCAGGGCCCATGTGGAAGCCCCCTGCGCCCATCGTGGAGGCCCCACCGTCTCTCCCAGAGCTACTAGGAGATGTCCCGGGTTCCTCTTTTCTGAGATGCTGATGTCCCCCCGAGACATCAACCACAACCTGGCCTCCTTCACTTACGATTTCACCCTGGAGAACTCTGTGCTCTGTGACCATTGACCTGTCTACTTTCTGACtgtatgacctctgacctttttGATCTGTCAACCTCCTCCAATACCAACCCTTTGTCAaccctgggtcgtgttcattgggcagcaaacagaagaaaacatacTGAAACAGGGCGGGACATCCTGGGCTTGCCTAATAAGAaaggcacatttttgtttttagaGTTTAGCTACATGtgctctactgaacacaacctTGGACTGTCTTGTCTCGTTACCATTCAGGTTTAGTTTCAGTTCCATGGGGCTCTGTCTGAGAATGGCAATACTATAATTAATAATAAACCTGGTTCTGGTGATGATCAGCATTAGGTGGGGTCAAAACTGCACCTGCCTGCAGTGATGTAGGTACACACAGTATGTAGGTAGATGGGTACACAGAATTCCACCTTTTTAAGATTGCAGATTAGGAATACTAGTTAAGAATGTTAATCACTTGCTGATGCATGTCATAGTAGTGCTGGTTCACtgttttaagtgtgtgtgtgtgtgtcagaagagCGTTAGCTTCATGTCGGATGATAGGAATGCTTGAACATAGCTGAGGCTTGCGTTGAAGAACAGAGTCAGGGTCTAGATtcacctgctgttgttgttggtttAGGAATCACTGATTGACCTTTTGGGTTTGCACTAATGTACGTACCAGACAGATTTCAAATGGAATCTTAGGAAGGAAATGACTTCTTTATCTGGTTACGTTTTTTACCCTGGTGTCCTCACCTTTGCCAATGACGTTGAGAATATTTTAACAAGACATTTCCAAAAAAGTTTGTGTAGCATAAGCATTTCTACAATGGAACTTTCTAGCTTTTTGATAATGTATTTAAAATGTAAGAATATATACCCCCTAATTTACAACAGTTATTTTCAGGAGAGTGGCCTTCTCTTTTGGTCATCTTCAGCATGATGTCATCATGTGTTGTAACCTCCCACACattgtatttgttatttattCTGAACTAAGTTTCCTCTAGTTCTCATGGCACAGTTCAGATTTGACAGTGTTTCATGGTATCctgtaatatacagtgcctttggaaagcaTTCAGCCGTccttgatttttttccccccacattttgttacgttacagccttattctaaaatggatgaaataaaacatttttttctcagcaatctacaaacaataacccataatgacaaattgaaaacagtttttttttaaattatttttgcaaatgtattacaaaaaatATACGTATTTACAtaattcaggccctttgctatgagacttgatgtcatatccaagaagacttgaggctgtaatcgctgccaaaggttcttcaacaaagtgctgagtaaagagtctgaatacttatgttaatttattatttcagttttgtttattttttttacatacttttgcaaaaaatgaataaaaacctgtttttgctttgtgagTTGTGTGTAGataaggatttaaaaaaaatctattttagaataaggccacaaaaaaaggtggaaaaagtcaaggggtctgaatactttctgaattcacTGTATCTATATACTGCATTGCACACTGGTAAGCAAATTATCTTGTGAACAATTACACATTCAGTTAACTCTCAATCAAAACTTTTGGACTGCTGTATAAATGGCCAAGAGAAGCCACATTATGTTGCATAATAAACTGTTTATTTTATGACAATTATTTTGAAGTTAACTAATTATGAGTAGTTAACTCACAAGACAACCACTCAAGAATCTGAAAAGATGGCTCATAAGTTGCACTGGTATTTTCACTGCAATGTTGTGGTATTCCACATCATGTGAAATCATCCACAGATGCTGCGTTTGTACAGGCagctcaattattattattttttatttattttactaatcagatcagctcttttgacaataattgggcaaaaaaaaatctgattttggctgcctgtgtaaagTTACTTTCTACTGTATACATTAGGAAATGTTTGGTATTGACCCTCTCTGGACAATCCTTTGCTATGCATAGCTGTAAACCAAgtgtattctgtctgtctgtgttaaacGACACTGGATTTTCCCAggcctcttcctctctttgtcaTTCAATCACTGACCTAACCTTGCATGTTGATTTTGTTTCACAGGCAtggaaatacactgctcaaaaaaataaagggaacactaaaataaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971029.1 False 1437 mRNA 0.45 5 23964799 23979269
XM_036971030.1 False 1408 mRNA 0.45 4 23964799 23979269
XM_036971028.1 False 1450 mRNA 0.45 5 23964799 23979277
XM_036971027.1 False 1423 mRNA 0.45 4 23964799 23979279
TU2642876 True 2662 TUCP 0.39 5 23962314 23979253

Neighbor

gene id symbol gene type direction distance location
LOC110488132 LOC106570309 coding downstream 6809 23922729 ~ 23957990 (-)
LOC110488129 LOC106570314 coding downstream 703826 23249638 ~ 23260973 (-)
LOC110488128 LOC106570315 coding downstream 722171 23227922 ~ 23242628 (-)
LOC110488126 arl4a coding downstream 738998 23222514 ~ 23225801 (-)
LOC110488123 LOC106570320 coding downstream 903371 23044620 ~ 23061428 (-)
LOC110488136 LOC106570288 coding upstream 52086 24031365 ~ 24042992 (-)
LOC110488134 LOC106570288 coding upstream 80128 24059407 ~ 24065425 (-)
asns LOC106570297 coding upstream 182940 24162219 ~ 24176944 (-)
LOC110488143 LOC106570296 coding upstream 198018 24177297 ~ 24192891 (-)
LOC110488147 LOC106570299 coding upstream 246216 24225495 ~ 24253290 (-)
G2310460 NA non-coding downstream 81345 23882059 ~ 23883454 (-)
G2310416 NA non-coding downstream 149799 23812374 ~ 23815000 (-)
G2310404 NA non-coding downstream 168124 23794919 ~ 23796675 (-)
G2310397 LOC106570311 non-coding downstream 183310 23780824 ~ 23781489 (-)
G2310300 NA non-coding downstream 307672 23654990 ~ 23657127 (-)
G2310508 NA non-coding upstream 14135 23993414 ~ 23993858 (-)
G2310521 NA non-coding upstream 34698 24013977 ~ 24020787 (-)
G2310522 NA non-coding upstream 40158 24019437 ~ 24026302 (-)
G2310558 NA non-coding upstream 107372 24086651 ~ 24086890 (-)
G2310567 NA non-coding upstream 124159 24103438 ~ 24105173 (-)
G2310415 NA other downstream 146793 23816297 ~ 23818006 (-)
G2310381 LOC106570311 other downstream 203448 23760515 ~ 23761351 (-)
LOC118946453 NA other downstream 980665 22979779 ~ 22984566 (-)
ndufs6 LOC106570329 other downstream 1078877 22883692 ~ 22886170 (-)
LOC110489405 LOC106570343 other downstream 1545461 22416566 ~ 22498043 (-)
G2311141 NA other upstream 1183413 25162692 ~ 25163130 (-)
G2312079 LOC106582599 other upstream 1989704 25968983 ~ 25969361 (-)
G2313729 NA other upstream 2544965 26524244 ~ 26524609 (-)
LOC110488229 LOC106570201 other upstream 5314977 29283078 ~ 29318812 (-)
G2316235 NA other upstream 5518651 29497930 ~ 29500245 (-)

Expression


Co-expression Network