mtf (mtf)


Basic Information

Item Value
gene id mtf
gene name mtf
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 25066997 ~ 25083433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559481.2
tgaacatttaCGGGAGATTATGGAGCGTTGCCTGAGACAGGGGtttccatcaacaaaacaccaagtTATGGATTtgctcgtggaagaatggtgccGCATCCGTCCAATAGAGTTCCAagcacttgtagaatctatgccagggTGCCTGccttgaagctgttctggccTCGTGGTGGCTGGCTGTGGTGGctcatgttggtgtttcctttcttTTGGCAGTTACCTAGTAGTTTATTTCACGGTTGAGTGAGTTAATTCTGGGCGGAAAGAGGAAGCTAGATAAGTAGGCTGCTAGGGTAACTACGATGTTGCAACAGTGTAACAACGGAGGAATTGCTGATTGAGTCCGGGTAAACAAAGCAGAAGACATTTTATAAATACTTTGATGACCTTGTAGTTGTTCTTGACTGCATTTACGTGGTGAACTTTCAAAATGtGGCAAaccagttagtgtgtgtgtgcacctttgTTACCATGCAGGAGGATGAATGTCCAATCCAATGAGACCATGCTCTTTGAGGAAGAGGTGGACAAGACAAGTCGGGAGGTTGAAGAGGACAATGTGTCCACGAAGATGGTTACTGTCAACTGGGACCAATGGGACAGGTTACTGCTGCCCTCTCCACTGGACTCTGGTGTGCACAGTCTGGACACGGTGTACGACAGAACCACCGTGATGATTGAGCAAGACCCTGTGGGTTCTACAACTGACAataaagaggaagaagaggacctGATGATGTATCTAGACGAGGGATTTGAGACGGAGGACCGTGGAGGTCTGGAAGACCACTGGGAGGCCATGTCACAGGGGTACATCCACCACACCATCTCCCAGGACCAGATCCAGTTCACCATCAACCCTGGTTCCACACCCATGCCCCGGCACATCCAGGGGGCCACCATCACACTACACTCTGAGTGCCCAGATACCCACCACAGCGAGGTGAAGCGTTACCAGTGTCTATACAAGGACTGTACTCGTACCTACAGCACAGCAGGGAACCTGCGGACCCACCagaagagacacagaggagagtacACATTTGTCTGCAACCAGTTGGGCTGTGACAAGGCCTTCCTCACCTCCTACAGTCTGAAGATCCACATCCGCGTTCACACCAAGGAGAAACCCTTTGAATGTGATCAACAGGGCTGTGAGAAGGCCTACAACACACTGTATAGGCTAAAAGCCCACCAGAGACTGCACACAGGGAACACGTTTAACTGTGAGTCAGATGGATGCACCAAGTACTTCACCACCCTGAGTGACCTGAGGAAACACATCCGGACACACTCCAAGGAGAAGCCCTTCAGGTGTGATAATCCTGGCTGTTACAAGACTTTCACCTCTAGTGACCATCTCCAAACACACTTCCTGGGACACACAGGCGAGCCACCCCTCCTTCAGGTGGACACAGACGGCGATATCTCCCTAAGCGCCTCCAACAGCCTTAGAGACAACATCAAAGGTCATGACCCTGGAGCGTCAGCTGACATCACTGACAGCCGCTCTCTCTTAGAGGATTTGAACCCTCGTTCCCCATGTCTCAGTGATATGAGCCTGATTTCCACTGATTCTCAGCTCAGAGAAAATAATTCTGATGCCCTGGATCTGATGTTTGAGTTGCTGTTTCAAGACAAGCCCCAGACACAGGGTGTGTCGTCGTTGGCAGTGCCCTCATGTAGTTTGGAGAACCCATCTCCAACCGTGGTGCTCCCAGAAGCATCTCCCTGTTTTATCTCTACCTGTCCTGCCCCCTCTGACTCTCTCCCTGGTGAACCCTGTCCTGTACCCCAGCCCGTCGCTGTCCTCACCCCTGGTGAATCCTGTCCAGTTCCTGTCGCTGTCTCTCCCATGATCAGTGAAATAACTAAACATGATGTGAATCCAGAACAGCTGTCCAACCAGAGCCTATTACAACAGCCAGCCGCATCCGTCTATTACCAACCTAGCTCCAATCAGAGCCTACTACCACAGCCAACCAACGAGAGCCTCCTTCCACAGCAGAGCCTACGACTAGAGCCAACCATCACCCTCCATTCACAACCAGGCTCCACCCAGAGCCTCCTACTAGAGCCAACCACCACCCTCGATTCACAACTATGCTCCACCCAGAGTCTACTACTACAGCCAGCTGAGACGCCTTCCATCTATTCGCAACCAGGCCCATACCCTCCACCCCCCAGCTCCTTCATCCAGGCCCCACTAACATCCCTTTCCCTGGGGCACTTTGCTCCTCCTACTGTCCCTGCCCAGAGTACCCTCCAGCCCTTGACCTTGTCCACACAGAACCTCcagtggctgtttaacagtgtcAATGACCAGAGGCAgcaggacacacagacacagctatTACAACAACACAGTGGCTCGACACAAGAGAAGCTCTATTTCACCACAGCAATACCTATGGGAGGGAACACAGGGACAGCTCTGCAACAGCTAGGCCTGCGTCTGCCTGTCATCGTCATCAGACAGGGAGAGTCATGCCAGTGTCGGTGCCCCTGCAGAGACGGCAGCACAGTatcagacacagagaaacagactggTTGTCAACCTACTGGTGAACCCTCTGGTGCCCAGGTCAAGCAGCCCCAGGACCTATCAACCCAGGACCCACCACAGCCCCATCAGCCCCAGGACCCACCACCCCAGCCCCCTCTACCGCAgcagcctccacctccacctgtaCCTCTCTGATGAAAATTCAAGTCAACCTTTTGATAGTGAAGAAACTGTTCCTGTTACTTATCCACCTGAGACATCTTATATGCACTGTACTGTGTACTTAACTCTTTCTGTTGTTAATACCTAGTTCAGGATCAGGTCTCCCGACCCTGTCCCCATAACCTTAACCAACCGTAACCCCATACTAGTTGCTGAGGGTAGAAAGCAATCAAATGCTGCATTTCAGTGTAGATCAGGTCAACGCAGGTTATCTACAGTGTTTTATTTTGATTTATGACATGTCTGCTAGCGTTCAATTATGAGTTGGGCTAGAACAGTGGCTGGCCGCTGAGTGTAGTGTGGAAAACATTTGACTCAAGCACAAATCCTCTGTAGCGATATTCTACTTTACATCTAGTCCCGCTGGAAACATTAAGGGTGACATTTATTTTTGATGGCGCAGAAAGAAAAAGCTGCACGGGGAACATCACTCCCCATGCAGTACTTGGCATTGCAGTTTTTGTCAAATGTGTGTGAAATGCTAAATGTTCTGGGATGGTGTGCGTCATGTATCCGTACCATTTCATTATGAACCTGCAAATGATCTGGAGATGTTGTACATgctgctataacaatatagtgtATTTAGACacgagcaaactaacctggcaaAGAACACATTTTGAGTTTTTCTTGAATGTTCAAAATATAACCGTTTTTAACATTTCATTTTCTATGTAATGTCA
>XM_021559482.2
aacatttaCGGGAGATTATGGAGCGTTGCCTGAGACAGGGGtttccatcaacaaaacaccaagtTATGGATTtgctcgtggaagaatggtgccGCATCCGTCCAATAGAGTTCCAagcacttgtagaatctatgccagggTGCCTGccttgaagctgttctggccTCGTGGTGGCTGGCTGTGGTGGctcatgttggtgtttcctttcttTTGGCAGTTACCTAGTAGTTTATTTCACGGTTGAGTGAGTTAATTCTGGGCGGAAAGAGGAAGCTAGATAAGTAGGCTGCTAGGGTAACTACGATGTTGCAACAGTGTAACAACGGAGGAATTGCTGATTGAGTCCGGGTAAACAAAGCAGAAGACATTTTATAAATACTTTGATGACCTTGTAGTTGTTCTTGACTGCATTTACGTGGTGAACTTTCAAAATGtGGCAAaccagttagtgtgtgtgtgcacctttgTTACCATGCAGGAGGATGAATGTCCAATCCAATGAGACCATGCTCTTTGAGGAAGAGGTGGACAAGACAAGTCGGGAGGTTGAAGAGGACAATGTGTCCACGAAGATGGTTACTGTCAACTGGGACCAATGGGACAGGTTACTGCTGCCCTCTCCACTGGACTCTGGTGTGCACAGTCTGGACACGGTGTACGACAGAACCACCGTGATGATTGAGCAAGACCCTGTGGGTTCTACAACTGACAataaagaggaagaagaggacctGATGATGTATCTAGACGAGGGATTTGAGACGGAGGACCGTGGAGGTCTGGAAGACCACTGGGAGGCCATGTCACAGGGGTACATCCACCACACCATCTCCCAGGACCAGATCCAGTTCACCATCAACCCTGGTTCCACACCCATGCCCCGGCACATCCAGGGGGCCACCATCACACTACACTCTGAGTGCCCAGATACCCACCACAGCGAGGTGAAGCGTTACCAGTGTCTATACAAGGACTGTACTCGTACCTACAGCACAGCAGGGAACCTGCGGACCCACCagaagagacacagaggagagtacACATTTGTCTGCAACCAGTTGGGCTGTGACAAGGCCTTCCTCACCTCCTACAGTCTGAAGATCCACATCCGCGTTCACACCAAGGAGAAACCCTTTGAATGTGATCAACAGGGCTGTGAGAAGGCCTACAACACACTGTATAGGCTAAAAGCCCACCAGAGACTGCACACAGGGAACACGTTTAACTGTGAGTCAGATGGATGCACCAAGTACTTCACCACCCTGAGTGACCTGAGGAAACACATCCGGACACACTCCAAGGAGAAGCCCTTCAGGTGTGATAATCCTGGCTGTTACAAGACTTTCACCTCTAGTGACCATCTCCAAACACACTTCCTGGGACACACAGGTACAGGCGAGCCACCCCTCCTTCAGGTGGACACAGACGGCGATATCTCCCTAAGCGCCTCCAACAGCCTTAGAGACAACATCAAAGGTCATGACCCTGGAGCGTCAGCTGACATCACTGACAGCCGCTCTCTCTTAGAGTCTGATGCCCTGGATCTGATGTTTGAGTTGCTGTTTCAAGACAAGCCCCAGACACAGGGTGTGTCGTCGTTGGCAGTGCCCTCATGTAGTTTGGAGAACCCATCTCCAACCGTGGTGCTCCCAGAAGCATCTCCCTGTTTTATCTCTACCTGTCCTGCCCCCTCTGACTCTCTCCCTGGTGAACCCTGTCCTGTACCCCAGCCCGTCGCTGTCCTCACCCCTGGTGAATCCTGTCCAGTTCCTGTCGCTGTCTCTCCCATGATCAGTGAAATAACTAAACATGATGTGAATCCAGAACAGCTGTCCAACCAGAGCCTATTACAACAGCCAGCCGCATCCGTCTATTACCAACCTAGCTCCAATCAGAGCCTACTACCACAGCCAACCAACGAGAGCCTCCTTCCACAGCAGAGCCTACGACTAGAGCCAACCATCACCCTCCATTCACAACCAGGCTCCACCCAGAGCCTCCTACTAGAGCCAACCACCACCCTCGATTCACAACTATGCTCCACCCAGAGTCTACTACTACAGCCAGCTGAGACGCCTTCCATCTATTCGCAACCAGGCCCATACCCTCCACCCCCCAGCTCCTTCATCCAGGCCCCACTAACATCCCTTTCCCTGGGGCACTTTGCTCCTCCTACTGTCCCTGCCCAGAGTACCCTCCAGCCCTTGACCTTGTCCACACAGAACCTCcagtggctgtttaacagtgtcAATGACCAGAGGCAgcaggacacacagacacagctatTACAACAACACAGTGGCTCGACACAAGAGAAGCTCTATTTCACCACAGCAATACCTATGGGAGGGAACACAGGGACAGCTCTGCAACAGCTAGGCCTGCGTCTGCCTGTCATCGTCATCAGACAGGGAGAGTCATGCCAGTGTCGGTGCCCCTGCAGAGACGGCAGCACAGTatcagacacagagaaacagactggTTGTCAACCTACTGGTGAACCCTCTGGTGCCCAGGTCAAGCAGCCCCAGGACCTATCAACCCAGGACCCACCACAGCCCCATCAGCCCCAGGACCCACCACCCCAGCCCCCTCTACCGCAgcagcctccacctccacctgtaCCTCTCTGATGAAAATTCAAGTCAACCTTTTGATAGTGAAGAAACTGTTCCTGTTACTTATCCACCTGAGACATCTTATATGCACTGTACTGTGTACTTAACTCTTTCTGTTGTTAATACCTAGTTCAGGATCAGGTCTCCCGACCCTGTCCCCATAACCTTAACCAACCGTAACCCCATACTAGTTGCTGAGGGTAGAAAGCAATCAAATGCTGCATTTCAGTGTAGATCAGGTCAACGCAGGTTATCTACAGTGTTTTATTTTGATTTATGACATGTCTGCTAGCGTTCAATTATGAGTTGGGCTAGAACAGTGGCTGGCCGCTGAGTGTAGTGTGGAAAACATTTGACTCAAGCACAAATCCTCTGTAGCGATATTCTACTTTACATCTAGTCCCGCTGGAAACATTAAGGGTGACATTTATTTTTGATGGCGCAGAAAGAAAAAGCTGCACGGGGAACATCACTCCCCATGCAGTACTTGGCATTGCAGTTTTTGTCAAATGTGTGTGAAATGCTAAATGTTCTGGGATGGTGTGCGTCATGTATCCGTACCATTTCATTATGAACCTGCAAATGATCTGGAGATGTTGTACATgctgctataacaatatagtgtATTTAGACacgagcaaactaacctggcaaAGAACACATTTTGAGTTTTTCTTGAATGTTCAAAATATAACCGTTTTTAACATTTCATTTTCTATGTAATGTCA
>NM_001124492.1
AGGCTGCTAGGGTAACTACGATGTTGCAACAGTGTAACAACGGAGGAATTGCTGATTGAGTCCGGGTAAACAAAGCAGAAGACATTTTATAAATACTTTGATGACCTTGTAGTTGTTCTTGACTGCATTTACGTGGTGAACTTTCAAAATGtGGCAAaccagttagtgtgtgtgtgcacctttgTTACCATGCAGGAGGATGAATGTCCAATCCAATGAGACCATGCTCTTTGAGGAAGAGGTGGACAAGACAAGTCGGGAGGTTGAAGAGGACAATGTGTCCACGAAGATGGTTACTGTCAACTGGGACCAATGGGACAGGTTACTGCTGCCCTCTCCACTGGACTCTGGTGTGCACAGTCTGGACACGGTGTACGACAGAACCACCGTGATGATTGAGCAAGACCCTGTGGGTTCTACAACTGACAataaagaggaagaagaggacctGATGATGTATCTAGACGAGGGATTTGAGACGGAGGACCGTGGAGGTCTGGAAGACCACTGGGAGGCCATGTCACAGGGGTACATCCACCACACCATCTCCCAGGACCAGATCCAGTTCACCATCAACCCTGGTTCCACACCCATGCCCCGGCACATCCAGGGGGCCACCATCACACTACACTCTGAGTGCCCAGATACCCACCACAGCGAGGTGAAGCGTTACCAGTGTCTATACAAGGACTGTACTCGTACCTACAGCACAGCAGGGAACCTGCGGACCCACCagaagagacacagaggagagtacACATTTGTCTGCAACCAGTTGGGCTGTGACAAGGCCTTCCTCACCTCCTACAGTCTGAAGATCCACATCCGCGTTCACACCAAGGAGAAACCCTTTGAATGTGATCAACAGGGCTGTGAGAAGGCCTACAACACACTGTATAGGCTAAAAGCCCACCAGAGACTGCACACAGGGAACACGTTTAACTGTGAGTCAGATGGATGCACCAAGTACTTCACCACCCTGAGTGACCTGAGGAAACACATCCGGACACACTCCAAGGAGAAGCCCTTCAGGTGTGATAATCCTGGCTGTTACAAGACTTTCACCTCTAGTGACCATCTCCAAACACACTTCCTGGGACACACAGGTACAGGCGAGCCACCCCTCCTTCAGGTGGACACAGACGGCGATATCTCCCTAAGCGCCTCCAACAGCCTTAGAGACAACATCAAAGGTCATGACCCTGGAGCGTCAGCTGACATCACTGACAGCCGCTCTCTCTTAGAGGATTTGAACCCTCGTTCCCCATGTCTCAGTGATATGAGCCTGATTTCCACTGATTCTCAGCTCAGAGAAAATAATTCTGATGCCCTGGATCTGATGTTTGAGTTGCTGTTTCAAGACAAGCCCCAGACACAGGGTGTGTCGTCGTTGGCAGTGCCCTCATGTAGTTTGGAGAACCCATCTCCAACCGTGGTGCTCCCAGAAGCATCTCCCTGTTTTATCTCTACCTGTCCTGCCCCCTCTGACTCTCTCCCTGGTGAACCCTGTCCTGTACCCCAGCCCGTCGCTGTCCTCACCCCTGGTGAATCCTGTCCAGTTCCTGTCGCTGTCTCTCCCATGATCAGTGAAATAACTAAACATGATGTGAATCCAGAACAGCTGTCCAACCAGAGCCTATTACAACAGCCAGCCGCATCCGTCTATTACCAACCTAGCTCCAATCAGAGCCTACTACCACAGCCAACCAACGAGAGCCTCCTTCCACAGCAGAGCCTACGACTAGAGCCAACCATCACCCTCCATTCACAACCAGGCTCCACCCAGAGCCTCCTACTAGAGCCAACCACCACCCTCGATTCACAACTATGCTCCACCCAGAGTCTACTACTACAGCCAGCTGAGACGCCTTCCATCTATTCGCAACCAGGCCCATACCCTCCACCCCCCAGCTCCTTCATCCAGGCCCCACTAACATCCCTTTCCCTGGGGCACTTTGCTCCTCCTACTGTCCCTGCCCAGAGTACCCTCCAGCCCTTGACCTTGTCCACACAGAACCTCcagtggctgtttaacagtgtcAATGACCAGAGGCAgcaggacacacagacacagctatTACAACAACACAGTGGCTCGACACAAGAGAAGCTCTATTTCACCACAGCAATACCTATGGGAGGGAACACAGGGACAGCTCTGCAACAGCTAGGCCTGCGTCTGCCTGTCATCGTCATCAGACAGGGAGAGTCATGCCAGTGTCGGTGCCCCTGCAGAGACGGCAGCACAGTatcagacacagagaaacagactggTTGTCAACCTACTGGTGAACCCTCTGGTGCCCAGGTCAAGCAGCCCCAGGACCTATCAACCCAGGACCCACCACAGCCCCATCAGCCCCAGGACCCACCACCCCAGCCCCCTCTACCGCAgcagcctccacctccacctgtaCCTCTCTGATGAAAATTCAAGTCAACCTTTTGATAGTGAAGAAACTGTTCCTGTTACTTATCCACCTGAGACATCTTATATGCACTGTACTGTGTACTTAACTCTTTCTGTTGTTAATACCTAGTTCAGGATCAGGTCTCCCGACCCTGTCCCCATAACCTTAACCAACCGTAACCCCATACTAGTTGCTGAGGGTAGAAAGCAATCAAATGCTGCATTTCAGTGTAGATCAGGTCAACGCAGGTTATCTACAGTGTTTTATTTTGATTTATGACATGTCTGCTAGCGTTCAATTATGAGTTGGGCTAGAACAGTGGCTGGCCGCTGAGTGTAGTGTGGAAAACATTTGACTCAAGCACAAATCCTCTGTAGCGATATTCTACTTTACATCTAGTCCCGCTGGAAACATTAAGGGTGACATTTATTTTTGATGGCGCAGAAAGAAAAAGCTGCACGGGGAACATCACTCCCCATGCAGTACTTGGCATTGCAGTTTTTGTCAAATGTGTGTGAAATGCTAAATGTTCTGGGATGGTGTGCGTCATGTATCCGTACCATTTCATTATGAACCTGCAAATGATCTGGAGATGTTGTACATgctgctataacaatatagtgtATTTAGACacgagcaaactaacctggcaaAGAACACATTTTGAGTTTTTCTTGAATGTTCAAAATATAACCGTTTTTAACATTT

Function

NR:

description
metal response element-binding transcription factor isoform X1

GO:

id name namespace
GO:0046686 response to cadmium ion biological_process
GO:0010043 response to zinc ion biological_process
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K23317 MTF1; metal regulatory transcription factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559481.2 False 3417 mRNA 0.50 11 25066997 25083433
XM_021559482.2 False 3346 mRNA 0.50 10 25066999 25083433
NM_001124492.1 True 3119 mRNA 0.50 11 25067282 25083414

Neighbor

gene id symbol gene type direction distance location
LOC110488162 LOC106570281 coding upstream 5333 25050295 ~ 25061664 (+)
LOC110488160 LOC106588667 coding upstream 115028 24943427 ~ 24951969 (+)
LOC110488157 LOC106588669 coding upstream 151697 24797318 ~ 24915300 (+)
LOC110488151 LOC106570304 coding upstream 599754 24420174 ~ 24467243 (+)
ngly1 ngly1 coding upstream 646996 24409861 ~ 24420001 (+)
LOC110489411 LOC106570275 coding downstream 3934 25087367 ~ 25110258 (+)
LOC110488164 LOC106570276 coding downstream 31862 25115295 ~ 25133431 (+)
LOC110488166 LOC106570277 coding downstream 52412 25135845 ~ 25145239 (+)
LOC110488167 foxo6 coding downstream 72253 25155686 ~ 25216037 (+)
LOC118946545 slfnl1 coding downstream 253585 25337018 ~ 25352457 (+)
G2309805 NA non-coding upstream 67937 24990401 ~ 24999060 (+)
G2309779 NA non-coding upstream 142783 24921035 ~ 24924214 (+)
G2309741 NA non-coding upstream 283491 24782673 ~ 24783506 (+)
G2309703 NA non-coding upstream 326519 24740250 ~ 24740478 (+)
G2309701 NA non-coding upstream 328294 24738438 ~ 24738703 (+)
G2309886 NA non-coding downstream 70701 25154134 ~ 25154344 (+)
G2309895 NA non-coding downstream 86791 25170224 ~ 25170474 (+)
G2309897 NA non-coding downstream 100894 25184327 ~ 25184575 (+)
G2309900 NA non-coding downstream 105683 25189116 ~ 25189319 (+)
G2309913 NA non-coding downstream 125388 25208821 ~ 25209125 (+)
LOC110488142 LOC106570295 other upstream 909561 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1086218 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2462276 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2650705 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3479563 21587088 ~ 21587434 (+)
G2311528 NA other downstream 651761 25735194 ~ 25736847 (+)
G2311978 NA other downstream 835719 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1241719 26325152 ~ 26325383 (+)
G2312752 NA other downstream 1649871 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 1733251 26816398 ~ 26820899 (+)

Expression


Co-expression Network