LOC110488164 (LOC106570276)



Basic Information


Item Value
gene id LOC110488164
gene name LOC106570276
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 25115295 ~ 25133431 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036970869.1
CTCACCCCGGTCAATCTCGGCGAAAGAACGTTGCTCAGCGCGTGTACCgaatttaaaaatgtattgaaaataaatgttatttCTCCACCGAGGAAGAAATGTTATTCCTCGTTTTACTGGTGTAATGAATGCGAGAGGCACAGTGACTGTACAATTTGGGAGGGAGTTGTCAGGGCAAAAATCCATTGGCATGAATGTAAAACTATGCAATGAACGGGGGCACAATTGTTATTTTCTCTTTCAGCTAGAGAGGGTTGCTTAAAAAGGGGGCAGTATTTCCCATTTTCGCTTCTACAGAGCACACAGTCTGTGTTGTTTTAGTAGCGAgccaagcaagcaagcaagcggGCGCGCGCTGTTGATGGGGTACTTGAGCTGCAGATTTGCTCAGCACGCTCACGGAACTTGTCTATCTGCGCGACAACGTGTTTGGCTGAGTGGTGGCTAATGGCTGCCATAGAAAGTGAGAAAGACAACAACAAATGAATCCTTGAGAGAAGACGAAAACAGTGGTAACCCATTAACCCCACCACTTCTCTGCACCGTGAGGAAGAGGATGGTGAGCAGCCAGCCGAAGTATGAGCTGATCCAGGAGGTGGGGCGTGGCAGCTACGGTGTGGTGTATGAGGCGGTGGTGAAACGCACTGGAGCCCGGATGGCCGTGAAGAAGATCCGCTGCCACAGCCCAGAGAATGTAGAGTTGGCCCTCAGGGAATTCTGGGCCCTGAGCAGTATCCAGAGCCAGCACCCCAATGTCATCCACCTTGAGGAGTGTGTCCTACAGAGAGATGACCTGGCTCAGAGGATGAGCCATGGGTCCAGCTCCCCACTATACCTAGAGCTGGTGGAGACATCTCTGAAGGGAGAGATTACCTTTGACCCCTGCTGTGCCTACTACCTGTGGTTTGTCATGGACTTCTGTGACGGAGGAGACATGAATGCTTACCTGTTGTCCCGTAAACCCAGCCGCAAGACCAACACCAGCTTCATGCTGCAGTTAGGAAGTGCCTTGGCCTTCCTTCACCGAAACCAGATCATCCACCGGGACCTGAAGCCTGACAACATCCTCATCTCCCAGGGAAGGACCTTGGCTGGAACCCCTGAGCCTACCCTGAAGGTTGCCGACTTCGGCCTATCCAAGGTCTGCTCCACGTCGGGCCTTAACCCTGAGGAACCAGCATCTGTCAACAAGTGTTTCCTTTCCATGGCGTGCGGCACAGACTTCTACATGGCTCCAGAGGTGTGGGAGGGCCACTACACGGCTAAAGCAGACATCTTTGCCCTGGGCATCATCATCTGGGCCATGGTGGAGCGCATCACGTTCGTGGATGTGGAGACCCAGAAAGAGCTTCTGGGAAGCTACGTGCAGCAGGGGGAGGAGATCGTGCCACTCGGGGAGGCGCTCCTGGAGAACCCCAAGATGGAGCTGTTGATCCCTGCCAGGATGAAGAGCATGAATGCCGGCATGAAACAGCTTATCAGGGAGATGCTGTCATTCAACCCTCAGGAGAGGCCTGACGCCTTTGAACTGGAGCTCCGACTGGTCAGGATCGCCTGCAGAGAGCTCGACTGGGACACGTGATAATGGGGGTggataggaggggagaggaccATGGGACTTGTAGTCACAACGTCAAGAACATGTATCTAGGCCTAATTCACCACTGTTTGCTCTTGTGACGGAGGCcacacaaatattatttttgctcgcttgctctctctcgctctctctcgctctctttcgcgCTCTCTGGGAACAATTCAAAGTTTGCAAAGATTTTGGCTTTGCAGTTGGATATTGGATCGGAAGTACTGGTAAACCTAGCTCAACAGGTTGACAGCCAGTCTGTAAGTTTTTGTGTTTTGAATGTTAACTTGGCAAGGTTGTCCATAAGCACATTCAGCTGTCTGTCTTGCAGAAGGAGATGCGTTGCTAGCTACCCCACTGCTACTGGTTTAGGTTAACCTGTTAAAGTTGACTCTGTAGTTTGCCTACAAATGCCACCCCAGACTCTGTGGTAATATTCATACTAAAGTTTTGATACAGGGAGACTAtcctgttatgatatggatgcaATTATACACACAGGTCCACACCTCAGTGATCGTAAACTGTGCACGGCTGGTTTTACCAGAACTCTGTGACCACACCCTGCTCTTCCCTTTCAACAAACATGCACACTTCCCACTGCTCAGGTAAAAACGAAGATATACTGTTTGTTGGGATTTGTAGACAAACAGCTGCTTTTGAAGAGAGCAACATGACATCAGAGGCCTGTGTATTCTGAGCTGGCCCTGAGCCAACTATGGGAATTAGGCTAGTGGGAGCTGACAGTCTTGGTATGCCAGTGCAGACCTAACCTAGCAATTCCCAGCCCAGTGCAGACCTAACCTAGCAA
>XM_021560254.2
TCACCCCGGTCAATCTCGGCGAAAGAACGTTGCTCAGCGCGTGTACCgaatttaaaaatgtattgaaaataaatgttatttCTCCACCGAGGAAGAAATGTTATTCCTCGTTTTACTGGTGTAATGAATGCGAGAGGCACAGTGACTGTACAATTTGGGAGGGAGTTGTCAGGGCAAAAATCCATTGGCATGAATGTAAAACTATGCAATGAACGGGGGCACAATTGTTATTTTCTCTTTCAGCTAGAGAGGGTTGCTTAAAAAGGGGGCAGTATTTCCCATTTTCGCTTCTACAGAGCACACAGTCTGTGTTGTTTTAGTAGCGAgccaagcaagcaagcaagcggGCGCGCGCTGTTGATGGGGTACTTGAGCTGCAGATTTGCTCAGCACGCTCACGGAACTTGTCTATCTGCGCGACAACGTGTTTGGCTGAGTGGTGGCTAATGGCTGCCATAGAAAGTGAGAAAGACAACAACAAATGAATCCTTGAGAGAAGACGAAAACAGAGGATGGTGAGCAGCCAGCCGAAGTATGAGCTGATCCAGGAGGTGGGGCGTGGCAGCTACGGTGTGGTGTATGAGGCGGTGGTGAAACGCACTGGAGCCCGGATGGCCGTGAAGAAGATCCGCTGCCACAGCCCAGAGAATGTAGAGTTGGCCCTCAGGGAATTCTGGGCCCTGAGCAGTATCCAGAGCCAGCACCCCAATGTCATCCACCTTGAGGAGTGTGTCCTACAGAGAGATGACCTGGCTCAGAGGATGAGCCATGGGTCCAGCTCCCCACTATACCTAGAGCTGGTGGAGACATCTCTGAAGGGAGAGATTACCTTTGACCCCTGCTGTGCCTACTACCTGTGGTTTGTCATGGACTTCTGTGACGGAGGAGACATGAATGCTTACCTGTTGTCCCGTAAACCCAGCCGCAAGACCAACACCAGCTTCATGCTGCAGTTAGGAAGTGCCTTGGCCTTCCTTCACCGAAACCAGATCATCCACCGGGACCTGAAGCCTGACAACATCCTCATCTCCCAGGGAAGGACCTTGGCTGGAACCCCTGAGCCTACCCTGAAGGTTGCCGACTTCGGCCTATCCAAGGTCTGCTCCACGTCGGGCCTTAACCCTGAGGAACCAGCATCTGTCAACAAGTGTTTCCTTTCCATGGCGTGCGGCACAGACTTCTACATGGCTCCAGAGGTGTGGGAGGGCCACTACACGGCTAAAGCAGACATCTTTGCCCTGGGCATCATCATCTGGGCCATGGTGGAGCGCATCACGTTCGTGGATGTGGAGACCCAGAAAGAGCTTCTGGGAAGCTACGTGCAGCAGGGGGAGGAGATCGTGCCACTCGGGGAGGCGCTCCTGGAGAACCCCAAGATGGAGCTGTTGATCCCTGCCAGGATGAAGAGCATGAATGCCGGCATGAAACAGCTTATCAGGGAGATGCTGTCATTCAACCCTCAGGAGAGGCCTGACGCCTTTGAACTGGAGCTCCGACTGGTCAGGATCGCCTGCAGAGAGCTCGACTGGGACACGTGATAATGGGGGTggataggaggggagaggaccATGGGACTTGTAGTCACAACGTCAAGAACATGTATCTAGGCCTAATTCACCACTGTTTGCTCTTGTGACGGAGGCcacacaaatattatttttgctcgcttgctctctctcgctctctctcgctctctttcgcgCTCTCTGGGAACAATTCAAAGTTTGCAAAGATTTTGGCTTTGCAGTTGGATATTGGATCGGAAGTACTGGTAAACCTAGCTCAACAGGTTGACAGCCAGTCTGTAAGTTTTTGTGTTTTGAATGTTAACTTGGCAAGGTTGTCCATAAGCACATTCAGCTGTCTGTCTTGCAGAAGGAGATGCGTTGCTAGCTACCCCACTGCTACTGGTTTAGGTTAACCTGTTAAAGTTGACTCTGTAGTTTGCCTACAAATGCCACCCCAGACTCTGTGGTAATATTCATACTAAAGTTTTGATACAGGGAGACTAtcctgttatgatatggatgcaATTATACACACAGGTCCACACCTCAGTGATCGTAAACTGTGCACGGCTGGTTTTACCAGAACTCTGTGACCACACCCTGCTCTTCCCTTTCAACAAACATGCACACTTCCCACTGCTCAGGTAAAAACGAAGATATACTGTTTGTTGGGATTTGTAGACAAACAGCTGCTTTTGAAGAGAGCAACATGACATCAGAGGCCTGTGTATTCTGAGCTGGCCCTGAGCCAACTATGGGAATTAGGCTAGTGGGAGCTGACAGTCTTGGTATGCCAGTGCAGACCTAACCTAGCAATTCCCAGCCCAGTGCAGACCTAACCTAGCAA
>XM_021560253.2
ACCCCGGTCAATCTCGGCGAAAGAACGTTGCTCAGCGCGTGTACCgaatttaaaaatgtattgaaaataaatgttatttCTCCACCGAGGAAGAAATGTTATTCCTCGTTTTACTGGTGTAATGAATGCGAGAGGCACAGTGACTGTACAATTTGGGAGGGAGTTGTCAGGGCAAAAATCCATTGGCATGAATGTAAAACTATGCAATGAACGGGGGCACAATTGTTATTTTCTCTTTCAGCTAGAGAGGGTTGCTTAAAAAGGGGGCAGTATTTCCCATTTTCGCTTCTACAGAGCACACAGTCTGTGTTGTTTTAGTAGCGAgccaagcaagcaagcaagcggGCGCGCGCTGTTGATGGGGTACTTGAGCTGCAGATTTGCTCAGCACGCTCACGGAACTTGTCTATCTGCGCGACAACGTGTTTGGCTGAGTGGTGGCTAATGGCTGCCATAGAAAGTGAGAAAGACAACAACAAATGAATCCTTGAGAGAAGACGAAAACAGGAAGAGGATGGTGAGCAGCCAGCCGAAGTATGAGCTGATCCAGGAGGTGGGGCGTGGCAGCTACGGTGTGGTGTATGAGGCGGTGGTGAAACGCACTGGAGCCCGGATGGCCGTGAAGAAGATCCGCTGCCACAGCCCAGAGAATGTAGAGTTGGCCCTCAGGGAATTCTGGGCCCTGAGCAGTATCCAGAGCCAGCACCCCAATGTCATCCACCTTGAGGAGTGTGTCCTACAGAGAGATGACCTGGCTCAGAGGATGAGCCATGGGTCCAGCTCCCCACTATACCTAGAGCTGGTGGAGACATCTCTGAAGGGAGAGATTACCTTTGACCCCTGCTGTGCCTACTACCTGTGGTTTGTCATGGACTTCTGTGACGGAGGAGACATGAATGCTTACCTGTTGTCCCGTAAACCCAGCCGCAAGACCAACACCAGCTTCATGCTGCAGTTAGGAAGTGCCTTGGCCTTCCTTCACCGAAACCAGATCATCCACCGGGACCTGAAGCCTGACAACATCCTCATCTCCCAGGGAAGGACCTTGGCTGGAACCCCTGAGCCTACCCTGAAGGTTGCCGACTTCGGCCTATCCAAGGTCTGCTCCACGTCGGGCCTTAACCCTGAGGAACCAGCATCTGTCAACAAGTGTTTCCTTTCCATGGCGTGCGGCACAGACTTCTACATGGCTCCAGAGGTGTGGGAGGGCCACTACACGGCTAAAGCAGACATCTTTGCCCTGGGCATCATCATCTGGGCCATGGTGGAGCGCATCACGTTCGTGGATGTGGAGACCCAGAAAGAGCTTCTGGGAAGCTACGTGCAGCAGGGGGAGGAGATCGTGCCACTCGGGGAGGCGCTCCTGGAGAACCCCAAGATGGAGCTGTTGATCCCTGCCAGGATGAAGAGCATGAATGCCGGCATGAAACAGCTTATCAGGGAGATGCTGTCATTCAACCCTCAGGAGAGGCCTGACGCCTTTGAACTGGAGCTCCGACTGGTCAGGATCGCCTGCAGAGAGCTCGACTGGGACACGTGATAATGGGGGTggataggaggggagaggaccATGGGACTTGTAGTCACAACGTCAAGAACATGTATCTAGGCCTAATTCACCACTGTTTGCTCTTGTGACGGAGGCcacacaaatattatttttgctcgcttgctctctctcgctctctctcgctctctttcgcgCTCTCTGGGAACAATTCAAAGTTTGCAAAGATTTTGGCTTTGCAGTTGGATATTGGATCGGAAGTACTGGTAAACCTAGCTCAACAGGTTGACAGCCAGTCTGTAAGTTTTTGTGTTTTGAATGTTAACTTGGCAAGGTTGTCCATAAGCACATTCAGCTGTCTGTCTTGCAGAAGGAGATGCGTTGCTAGCTACCCCACTGCTACTGGTTTAGGTTAACCTGTTAAAGTTGACTCTGTAGTTTGCCTACAAATGCCACCCCAGACTCTGTGGTAATATTCATACTAAAGTTTTGATACAGGGAGACTAtcctgttatgatatggatgcaATTATACACACAGGTCCACACCTCAGTGATCGTAAACTGTGCACGGCTGGTTTTACCAGAACTCTGTGACCACACCCTGCTCTTCCCTTTCAACAAACATGCACACTTCCCACTGCTCAGGTAAAAACGAAGATATACTGTTTGTTGGGATTTGTAGACAAACAGCTGCTTTTGAAGAGAGCAACATGACATCAGAGGCCTGTGTATTCTGAGCTGGCCCTGAGCCAACTATGGGAATTAGGCTAGTGGGAGCTGACAGTCTTGGTATGCCAGTGCAGACCTAACCTAGCAATTCCCAGCCCAGTGCAGACCTAACCTAGCAA

Function


NR:

description
unnamed protein product

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K17539 PDIK1L, CLIK1L; serine/threonine-protein kinase PDIK1L

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036970869.1 False 2399 mRNA 0.51 3 25115295 25133431
XM_021560254.2 False 2355 mRNA 0.51 3 25115296 25133431
XM_021560253.2 True 2357 mRNA 0.51 3 25115298 25133431

Neighbor


gene id symbol gene type direction distance location
LOC110489411 LOC106570275 coding upstream 5037 25087367 ~ 25110258 (+)
mtf mtf coding upstream 31862 25066997 ~ 25083433 (+)
LOC110488162 LOC106570281 coding upstream 53631 25050295 ~ 25061664 (+)
LOC110488160 LOC106588667 coding upstream 163326 24943427 ~ 24951969 (+)
LOC110488157 LOC106588669 coding upstream 199995 24797318 ~ 24915300 (+)
LOC110488166 LOC106570277 coding downstream 2414 25135845 ~ 25145239 (+)
LOC110488167 foxo6 coding downstream 22255 25155686 ~ 25216037 (+)
LOC118946545 slfnl1 coding downstream 203587 25337018 ~ 25352457 (+)
LOC110488169 ctps1 coding downstream 304127 25437558 ~ 25452596 (+)
LOC110488170 LOC106570265 coding downstream 326276 25459707 ~ 25461881 (+)
G2309805 NA non-coding upstream 116235 24990401 ~ 24999060 (+)
G2309779 NA non-coding upstream 191081 24921035 ~ 24924214 (+)
G2309741 NA non-coding upstream 331789 24782673 ~ 24783506 (+)
G2309703 NA non-coding upstream 374817 24740250 ~ 24740478 (+)
G2309701 NA non-coding upstream 376592 24738438 ~ 24738703 (+)
G2309886 NA non-coding downstream 20703 25154134 ~ 25154344 (+)
G2309895 NA non-coding downstream 36793 25170224 ~ 25170474 (+)
G2309897 NA non-coding downstream 50896 25184327 ~ 25184575 (+)
G2309900 NA non-coding downstream 55685 25189116 ~ 25189319 (+)
G2309913 NA non-coding downstream 75390 25208821 ~ 25209125 (+)
LOC110488142 LOC106570295 other upstream 957859 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 1134516 23979350 ~ 23981983 (+)
G2308224 NA other upstream 2510574 22604320 ~ 22604721 (+)
c32h5orf49 cssa14h5orf49 other upstream 2699003 22405971 ~ 22416346 (+)
G2306825 NA other upstream 3527861 21587088 ~ 21587434 (+)
G2311528 NA other downstream 601763 25735194 ~ 25736847 (+)
G2311978 NA other downstream 785721 25919152 ~ 25919800 (+)
G2312300 NA other downstream 1191721 26325152 ~ 26325383 (+)
G2312752 NA other downstream 1599873 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 1683253 26816398 ~ 26820899 (+)

Expression



Co-expression Network