serinc2 (LOC106570256)


Basic Information

Item Value
gene id serinc2
gene name LOC106570256
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 26092544 ~ 26109748 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560271.2
TTGAGTTACAGTCTAACAAAAGGGTGTACCTGATTCTTCAGACACGCCCTGTTGCTGCTTTGATAGCGTCGAAGGAAACTACGCGTAGTTCAACAACGTTTTCAAGTAACTTGTTGACAATTTGGAGTTTTCTTCGTTTAATTAGGACTGGGGTATTCGTTCTAAACTGAAATGGGagcgtgtatggcattgtgttcAATCGCTAGCTGTGCATCATGTCTGTGTGGCTCCGCTCCCTGTCTGCTGTCAGGATGCTGTCCCTCCACCTACAACTCCACTGTGTCCCGGCTGGCCTTCTCCTTCCTGCTGCTGCTGGGGTCCCTGGTCTCTGTCATCATGATCCTACCTGGCATGGAGGCTCAGCTCAAGAAGATACCTGGGTTCTGTGTTGGTGGAACTTCCATAACCATACCAGGCATTGAAAACAAGGTGAACTGTGATGTCATCGTGGGCTACAAGTCTGTGTACCGCATGTGCTTTGCCATGGCCTGCTTCTTCTTCCTGTTCTCCATCATCATGATCCGTGTTCGCAGCAGCAAGGACCCCCGAGCCTCACTACAGAACGGATTCTGGTTCTTCAAGTTCCTTATACTGGTGGGAATAACTGTAGGAGCCTTCTTCATTCCAGATGGGACATTCAACACAGTGTGGTTCTACTTTGGCGTAGTGGGTTccttcatcttcatcatcatccaaCTGATCCTGCTGGTGGATTTTTCTCACACCTGGAACCAGTCCTGGCTGGAGAATGCTGAGGAGGGAAACAGCAAGTGCTGGTTTGCAGCTCTCCTGTCGTTCACGGTGCTACACTATGCCCTGGCCTTCTCTGCTGTGGTCTTGTTCTATGTCTATTACACCACGGGAGATGACTGCACTGAACACAAGATCTTCATTAGCCTTAACTTAATCTTTTGCATCATCATCTCCATTGTTGCCATCCTGCCCAAAGTTCAGGAGGCCCAGCCTAGCTCAGGCCTGCTCCAGGCCTCCCTCATTTCCCTCTACACCATGTATGTCACATGGTCTGCCATGACCAACAACCCCAACCGTAAGTGTAACCCCAGCCTGCTGAGTCTGGTCAACAACACCCCCAGCCCTACACCTGCCCCAGGACAAGAGGTCCAGTGGTGGGATGCACAGGGCATCATAGGACTGGTCATCTTCTTCTTCTGCACACTGTACGCCAGCATCCGTTCGTCCAACAACACCCAGGTGAACAGGCTGATGCAGACAGAGGAGGACCAGGGTCTGGCTGCAGACGACCACGAGGCGGCCATGGGGGAGGACGGGGTCAGACGGGCTGTGGACAATGAGGAAGATGCGGTCACCTACTCTTACTCCTTCTTCCACTTCAGCCTGTGCCTGGCCTCCCTATACATCATGATGACACTCACCAACTGGTACCAacctgacgcAGACTACCAGGCCATGCAGAGCAGTATGCCAGCAGTGTGGGTGAAGATTAGCTCTAGCTGGATAGGCTTGGCTCTCTACCTCTGGACCTTGGTAGCTCCTGTCATCCTCTCTAACCGAGACTTCAACTAAAGGCATACACCTTCCATCCAGagctgtcccaaatggtacctctATTCCTAAGTAGGAATAGGGTAGGTGTCTTTTCAGATTTGCTTTACTGTTTGGCATGTTATGAGTCACACTACTGggtaaaaacattttcattgtGCTGCTTGAAGAAGGGGACCACTGTCGTTTTTTTTATGTCCAGGCTTGTCTCATTGACTAGACATAACATATTAAACAAGaatctgggacactcaaatgAGTATGATAGGCagcgtttggtatggttacataaaaccggttacttaaggcaaaaacgaaaggagggtggttggctGGGTGGGTGAATCATCACGGACAATTTTAGATAATTGGCAACTTTGTGACAACTTAATTCTGTTTAGCTACTTTGCAAGTACTTAGCATGCTAGCTACCTTTTAACCTTAATCCTTAAGCATctagatggtcataccaaggatcatttagcaacttgatttagaattttaggacccctttcgGTATACATAAAATAATGATATCAAGCTTTaattatttgaatcaggtgtgtagtgcttgggcaaaacccaaaacgtgcaccccttgggatcccgaggaccgagtttgggaaactctggtgtagagaatcattgtaacaTCTAAACCCTTGTGAAATATACCttttttccataaccaaaaatattgtattttcagctgtttgaagatggtgtacaaaaccgaaagtaacaCACACAAATGAAACTTCAGAATGGGAAACATAGAAAAGTGACAGATCTATACCACACTTCTATCTGAATTTGGCCCGGTAGCCCAAAAAGTTACACATTGCATATTTCCATAAATGTTTTTACTAGTATCGGGCTACCTTCAGACGAGGCTTCTTGGCATCCTAGAGCAACGTTTTCGTGAGGAacgatttattttatttatttattttccccaaggatgtctcatggtctggcAAACACCTCTAGCttggccaccttccaccacaAATGCGGAAGGCTGCCATTGGTGGATTGAGACTCAGCCCACGCAAACAAAACGTATCTTTTACAGACAGCTTTGatggtgttttttgttgttgaaatcaTTATGCTAACTACATTTCCGCGGGGGTGCGGCTGTCGACTCTAGGGGGTAACTACTAGCCTAGCCAACGTTAGccgcctagctaacgttagtcgcAATAAATTAGAATTTTTAACATTGCATATTGTACAAATTACAATTGGAAACGTACACAttcatatcatacgaaatggaatATTTCACATACACAAATTAATACCTACCATACCAAACATCATACTAATTTCTGTTTTCCGTTTACTATTTTAAGTCTACCTATGAGTCCAGGTTGTTGTTAGCCATGAGGTTGGTTTTAtcattctgttttttttatatacatgcATACAAAAAATTTTGCTTGGTTTGACGCTTAACATATCTGGTCAGCGACTCTACTAAAACGTAAAAGTGCCTTTTTAAACCTACAGATTTGCTACACAATAAACTAGCTTTATATTCAAATGTgtatatgttttgtcataccttaACAGATTTGTATCTCTAATGCCTCTCCTTATGTTTAAATGTAATAAATCTGATCATCTCTGAAA

Function

NR:

description
serine incorporator 1-like

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560271.2 True 3162 mRNA 0.45 10 26092544 26109748

Neighbor

gene id symbol gene type direction distance location
LOC118946516 LOC106595335 coding upstream 13111 26076938 ~ 26079433 (+)
LOC118946546 LOC106595335 coding upstream 15748 26075092 ~ 26076796 (+)
LOC118946509 LOC106595335 coding upstream 22164 26065936 ~ 26070380 (+)
LOC110488177 LOC106595335 coding upstream 31244 26056853 ~ 26061300 (+)
LOC118946515 LOC106595335 coding upstream 40313 26047780 ~ 26052231 (+)
LOC110488179 LOC106570255 coding downstream 14731 26124479 ~ 26167353 (+)
LOC110488180 LOC106570254 coding downstream 62590 26172338 ~ 26176958 (+)
LOC110488181 LOC106570268 coding downstream 111961 26221688 ~ 26264034 (+)
LOC110488183 LOC106570248 coding downstream 386583 26496331 ~ 26509065 (+)
LOC110488188 LOC106570251 coding downstream 604363 26714111 ~ 26716280 (+)
G2312150 NA non-coding upstream 46395 26045916 ~ 26046149 (+)
G2312116 NA non-coding upstream 73620 26018705 ~ 26018924 (+)
G2312115 NA non-coding upstream 75051 26017221 ~ 26017493 (+)
G2312062 NA non-coding upstream 77512 26014828 ~ 26015032 (+)
G2312014 NA non-coding upstream 88907 26003196 ~ 26003637 (+)
G2312191 NA non-coding downstream 7943 26117691 ~ 26121049 (+)
G2312251 NA non-coding downstream 107328 26217076 ~ 26217517 (+)
G2312260 NA non-coding downstream 154940 26264688 ~ 26264909 (+)
G2312263 NA non-coding downstream 157577 26267325 ~ 26267732 (+)
G2311978 NA other upstream 172744 25919152 ~ 25919800 (+)
G2311528 NA other upstream 355697 25735194 ~ 25736847 (+)
LOC110488142 LOC106570295 other upstream 1935108 24151527 ~ 24157473 (+)
LOC110488133 NA other upstream 2111765 23979350 ~ 23981983 (+)
G2308224 NA other upstream 3487823 22604320 ~ 22604721 (+)
G2312300 NA other downstream 215404 26325152 ~ 26325383 (+)
G2312752 NA other downstream 623556 26733304 ~ 26733645 (+)
LOC110488193 LOC106570239 other downstream 706936 26816398 ~ 26820899 (+)
G2312933 NA other downstream 924051 27033799 ~ 27039185 (+)
LOC118946485 LOC106570234 other downstream 1088096 27197844 ~ 27202811 (+)

Expression


Co-expression Network