LOC110488182 (LOC106570253)



Basic Information


Item Value
gene id LOC110488182
gene name LOC106570253
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 26298713 ~ 26322682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021560282.2
AACAGAAGTGAAATCATTTTTGCTTTTCTATTCTTATTTTTGGGGTTGGGAAGTCTGTCATCGTTCTGTTTTTCATGTTCGACCCCTTGGTGAGACAGACCAACTGTAAACTGTGCACCTTGCCCTTTGGCGCGTGAGGATCAGTACACACCTTCCAGCCAATAAAACGCCGAGCAGGCGAAACAAAAGCGCGAGCCGTGTCCGACCAGCCGACCAGTAGTGCTTGGATAAGTTTTCAGCACCACAGACCAGAGAACAGTAACAGTCACAGGCGCGCGACAGTCCTAGAGCCATGGTGCTGAACCGGCTGATTTCGACATGTACTCGGTGATTCCGTTCAATGTCACCTACCCGGACGACAAGATGGGGTTCGTGCCAAACGTGCCAAACTTCACCCAGCAGCCCCCGGTTCAGAGCGCCTCCAATATTATAGTAGCCATCTCCATCACCGCGCTCTACTCGGTTATCTGCGTGGTGGGATTGCTCGGGAATGTCCTTGTGATGTACGGGGTGGTGAGATACACCAAGATGAAGACATCCACCAACATCTACATCTTTAACCTGGCTCTAGCGGATGCCCTAGCCACCAGCACACTGCCCTTCCAGAGCGCCATGTACCTGATGGGGACCTGGGCCTTCGGAGAGGTCCTCTGTAAGGTGGTCATCGCCATCGACTACTACAACATGTTCACAAGCATCTTTACCCTGACCATGATGTCTGTGGACCGCTACATTGCTGTGTGCCACCCAGTGAGAGCCCTGGAGTTCAGGACGCCCGCCAAGGGTAAGATCATCAACGTTCTGATCTGGGTTCTGTCCTCTGCCATCGGAGTGCCCATCATGGTCATGGCGGTGACCAAAACAACAGACAGTGGTCAGACTATGTGTACACTGAAGTTCCCCGACCCTGACTGGTACTGGGATACAGTCACTAAGATCTGCGTTTTCATCTTTGCCTTCATCATCCCTGTCATGGTCATCACCAtctgctatggtctgatgatacTGCGTTTGCGCAGCGTCCGCCTGCTCTCCGGCTCTAAGGAGAAGGACCGCAACATGCGCCGCATCACCCGCATGGTCCTCGTGATTGTCGCGGCCTTCATTGTCTGCTGGACGCCCATccacatcttcatcatcatcaagaCTCTGGTGGAGATCGACTTTGGGAACCCCTACGTGAAAGCCAGCTGGCACCTCTGCATTGCACTGGGCTACATGAACAGTAGTCTCAACCCTGTTCTCTACGCTTTCCTGGACGAGAACTTCAAGAGGTGCTTCCGGGACttctgcctgccctgccggacACGCGTGGAACGCAACTCCCTCAACAGGGGTCGGAACGCCAACCGGGAACCCGTGTCCGTCTGCGCTCCGACTGAAGCTGGGACGGAAAAGAAGCCCGTATGACTAGGCATGGACCAGATCCCTCGTGGTTCTCGATCCAGGAGGGTCCAGCAAGACCTGCAGTCTGAGATCACCCAGATCTCCACAACGGAATTCTGACAGGACAAACAATGATTTAGTCAGACTCACACAGGGGTGTCAGTAAAGGAGGTTCCAAAACACActataccttttttttttagacctcaTCATCGACATTCCTACCAGTGAGATTTAGGAACTTTCTTTATTGTAGCTCAGAAGTAGAGAGATTCAATTTTTCATCATAAATCGTTTTCAATAAAACTCTACACACATCTCTGTGAAGGTTCTATCTAGAGACAATATGTGAAGGTGCCAGGCCTTTTTGAGTAGTGAATTTCTGGTTCGTGACAAATGGATGTCTGGCTGTAGAGTGAATACACAGGATGTTGTCAAGGACAGTGGTCCAAAGTATACGACATGGTTTTGTCAACAAGTCATCCCTGTTTGTGACTGATGACAAGCTGCACAAATATGGGACTGGGGTTATTTTGAAAATAAGACAACGGGGTAAGGGACACCACTGAATGAGTAGATATGTAGACATGTGAAATGGGGACGTTTGACCCAGGAGGGGTTGGAGAAAACGCCCAACACTGTTCAGTGACAATGACAGTTGTTACAGCTGACGGACTTCGCAAAGATCCCAAATGCTAAGCAGTGGTCTATTTTTTTATCTCATGTACCAGAGACTGCATCATCCATCTTGAAGTAGTGTGAATAGACAAGACAGGCTGTAGCATGGGTACAGTACACTGTGAGTGGGATGTCAATGCTTCTCCAGGCTACAGTAGCCATGTGCTTTGACAAACTGAGAAAGTGGAGAAGCATGGATGTCCAACCATTGTTTATCAGACCTTCTTTCTATTCTCTGGGAAGCAAGCACCTGTAAACTAACATCGATGGTGAATTGTCAAAGATTGCTGACGCATATTCCATCACACTTGACTAAGGTACTGtaaaatggagagaaaaatagttattttccacTTTCCATCTACAAAAGGCAAAACAAATACATTGCACCACAGAGGAAGAAGAAACTACAGATCCATTGTGACAGGTTGGATGATGGATGAAAACATACTTTAGTGCAAAGCACTGGGGCACGAGACACTGAAACAAAATGGGAAAATGGGGCTGATAGCTACATGAATCTGCAAACAATGGAAATCTACCACAGAGCTTTGTGCCTGCGTGTGCTCCACTGCTGTACCATAGAATTTCCTCACAGACACCTCGGCTCTCGGCTACAAACCTAATAGACTCATAGATCGGAGCAGAGAGGTAGAAGGGACCACTGAAAGGAATAACTAAACAATCATAGAACACTGAGGGTGGAGGAGCAGAACAGCCTAATCTAGATCTACACTCTGCGTGAATGCATTACTACTCTGATGAATGTAAAAATGAAACAACAACAGCAAAACAACTTTAAAACTGACAAACCTGAAGAGTATGGCGGCTTGTGAAACCAAGACAACTGAGTATGTACATAGCTGAACCAAGTGAGATTTGGAAAGGACTTTTACAATCTGTTTTACTGTGTAATTggagaaaaacattgtgtcaTCTGTCAAAATAAATCGATGGCAGATTAGAGAGACTTAACTATGGCATTAAGTCATGATAAGATTCATGAGAAAGATGATGACAGCGCTCAATTTTACCTTGAGGGCATCAACTAATTATAGTGATTAAGATTAAAATGACCCTTCATATTTCATAGGCTGTAGGCTATAATTTATGACTTTATTATAGGGTATAAATTCTCCCGGTAACCTTGCAAAACATCAATGCTGATGAAAGATCAAGCCTGTAAATCGTTCCATAGATTGCAACCcacatgacaccctattccctatatagtgcactgcatttgaccaagtagtgcactatgtagggaatagggtaccatttcagaAGTAGCTATATTTTTTACTGACCTTGGGCATGATGCTATGTCAGGAACCACTATGACAAGCCCAAAAATGTGGACGAGAGGTTTGTGAATCGTTTTGCATAATGATTCTAGCTAGCACAGACTACAGATGAGAAGAGAATATAATTAATGACTGTTTATGTCAATGTCAGTTTAGATGACATAGTCTAACTATTAATGGTTAGATGTTAACATTTTGGCATATTTCTAATAAGATGAATGTGCATGTACCACAACATTGTAGTTTGCTGAAGGTAAGGAAACCAAAATCAGTTCCAAACTAAAATCACTTAACGTGACTTTGTAGATATAGATATTCTCAGAACTCTGACATATTATTTACGTAGTTGGCTAACCTTTTCAGTGACAGGTGAAACTAACTGGCTTCCGTTTGTGTATGTGATTCTGTATGCTGTTTTGATGATGACTATCGCTCCATTTTCACAGTGATATTTGATCAAATAGCTGTATGCTTTATTAGCTACTGTACTGCATAACTGCTGAGGCTAGTCttacatttaaaaaagaaaataaGAGAGAAACAGATTAAGTCCCATTTATAGAATGAAATTATTTTCATCCCGTATCTTCAGTATATGTCCTGGCAGTGAGTGAAAATGCTTCAGGTCTAATAACACAGACTGCTGAATTATTTACAGCCGAATCCGTTTCTGGTTTATGTTCTCTTTGCTTTTGTCAGTATTCCTGACAGACACACTTTATATTATTATGTGGATCTAAAACTACGTATTTACATGGCTTCTACAAAGAGAGATAGTCTATTAAAATGTGGAACAGCCTACGCATTATTATGTATGACAGATGTGGTATTGATTACATGCATTAGCTTTGCAAACAAGCTCAAATCGACAGGGTAGAGATATAATGGTaaaaggtacagtacagtacatcaaaCTGACAAATGCGTGCAAATGTCACAAAATAGAAAATGACCACTTAGCCACCCATTTTTACTAGAGCAACAGTTGCTAATAGCCTACTATAACCTTTTTGCCTCTGAGTGTCTGTTATAGAACGATGGATTTTATATTGATCAAGGCTAACTCCCACATAGTATTTCTGGGAACCGCTGTCAATAGCTACAATACTGCAATACAATTGTAACTTTCCTTTCTCTCGTCATGTGAGTCACACTTTGTGTTGAAAATCTAATTTCATTATTTAACAATCTATCATTCATGGTTTTTATACTTatacactgagagtacaaaacattaaggacaccttcctaatattgagttgcaccccttcccccccctccccttgttGACCCCAAGGCCCGTGCTGGCctgtgttgactccaatgcttcccacagttgtgtcaagttggcttgatGTTCTTTTGGGTAGTGGACCGttattgatacacacaggaaactgttgaggatggaaaacccagcagcattgcagttcttgacacaaaccagtgtgcctggcacttactaccattccccattcaaaggcacttaaatattttgtcttgcacattcaaCATCctaatggcacacatacaccatGCGTGTCTTAATTGTCTGAAGGCTtgaaaatcattctttaacctgtctcctccattcATTGACATtgattgaattggatttaacaagtgatatcaataagggatcatagctatCAACTGgtgtcacctggtcagtctacaatatgtcatggaaagtgcaggtgtccttaatgttttgtacacccagtgtaTTTTGGTAAAGCTTTATATAAATAGTCAATGTGCAGATGTTCAACAAACTAGCTGTAGACTATCAGCAGGATATCAACAGTATTTTTTTAGCCTACAGATTCACTATTTAATCCAAATATAGCTTTACCTCTGTTTTTTCTAGCACTGTTCTTCTGCCCTGCTTTGGATATTGCAGTTAGGGAATTTTGTCATTTTTATGAATTAATATGCATTTATAAGTAACTCCTTTAAAACAATTGAATACTGGAACATTTCTGTAAAATGTATACAAAACGCTGTATGTTTGCTTATATTCAATGTATTGCCAGAGACTGTAAGGTATTTGTGCTAGTCACACTTGAACCCATCATGATTAACTTTACAGTGCTCATGCAGTGATccttatagtttatagtttataacTTACGCTAGCTAGATGAGTATCTATTGTAAAATGCATTGATGAATTAACAGCAAGCCAAGATGTTTTACAAGAAGCTTCTCGGATTGTtgattaaaacaacaacaaaaatcaatAAAATGAACACGGTAG

Function


NR:

description
delta-type opioid receptor-like

GO: NA

KEGG:

id description
K04213 OPRD1; delta-type opioid receptor

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021560282.2 True 5631 mRNA 0.42 5 26298713 26322682

Neighbor


gene id symbol gene type direction distance location
LOC110488176 LOC106570259 coding downstream 254974 26019320 ~ 26043739 (-)
LOC110488175 LOC106570260 coding downstream 295716 25995578 ~ 26002997 (-)
LOC110488174 LOC106588632 coding downstream 769562 25528117 ~ 25529151 (-)
LOC118946560 NA coding downstream 840786 25457791 ~ 25457927 (-)
LOC118946558 NA coding downstream 841117 25457520 ~ 25457596 (-)
zdhhc18b LOC106570247 coding upstream 252765 26575447 ~ 26583341 (-)
LOC110488185 LOC106570245 coding upstream 271416 26594098 ~ 26661878 (-)
ntl ntl coding upstream 361297 26683979 ~ 26687789 (-)
LOC110488186 nudc coding upstream 382534 26705216 ~ 26712886 (-)
LOC110488187 LOC106570243 coding upstream 394097 26716779 ~ 26745316 (-)
G2312460 NA non-coding downstream 4985 26293488 ~ 26293728 (-)
G2312442 NA non-coding downstream 35071 26262492 ~ 26263642 (-)
G2312402 NA non-coding downstream 81476 26216614 ~ 26217237 (-)
G2312165 NA non-coding downstream 228900 26069427 ~ 26069813 (-)
G2312160 NA non-coding downstream 239223 26050196 ~ 26059490 (-)
G2312496 NA non-coding upstream 23813 26346495 ~ 26346731 (-)
G2312505 NA non-coding upstream 35425 26358107 ~ 26358319 (-)
G2312508 NA non-coding upstream 37620 26360302 ~ 26360671 (-)
G2313613 NA non-coding upstream 39821 26362503 ~ 26362720 (-)
G2313653 NA non-coding upstream 101680 26424362 ~ 26424575 (-)
G2312079 LOC106582599 other downstream 329352 25968983 ~ 25969361 (-)
G2311141 NA other downstream 1135583 25162692 ~ 25163130 (-)
umad1 LOC106588684 other downstream 2319460 23962314 ~ 23979279 (-)
G2310415 NA other downstream 2480707 23816297 ~ 23818006 (-)
G2310381 LOC106570311 other downstream 2537362 23760515 ~ 23761351 (-)
G2313729 NA other upstream 201562 26524244 ~ 26524609 (-)
LOC110488229 LOC106570201 other upstream 2971574 29283078 ~ 29318812 (-)
G2316235 NA other upstream 3175248 29497930 ~ 29500245 (-)
G2316696 NA other upstream 3711616 30034298 ~ 30039597 (-)
G2318269 NA other upstream 4812825 31135507 ~ 31135959 (-)

Expression



Co-expression Network