LOC118946492


Basic Information

Item Value
gene id LOC118946492
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 27535951 ~ 27536309 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041346.1
AAGGCTGTACTTGTATTAACATATATGTTCAGATCATTcctgagagagaaggggtgtAGTATCTCCAGATGAGtgtgtggtacccttcctcaccATGCCAACAAGATGTTACTTCTTGTGGGGTCTTTGCCTTGAAATTTGCTGAATGTGTTCTGAAGGAGGAGTCGATTGTCTTTTCAAATACGGA

Function

NR:

description
PREDICTED: flocculation protein FLO11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041346.1 True 187 mRNA 0.42 2 27535951 27536309

Neighbor

gene id symbol gene type direction distance location
LOC110489415 LOC106570218 coding upstream 160369 27316604 ~ 27375582 (+)
LOC110488195 LOC106588620 coding upstream 259505 27203437 ~ 27276446 (+)
LOC118946485 LOC106570234 coding upstream 333145 27197844 ~ 27202811 (+)
LOC110488194 LOC106570237 coding upstream 352665 27141022 ~ 27183286 (+)
LOC110489414 trappc9 coding upstream 419722 26828036 ~ 27116229 (+)
LOC110488197 LOC106570220 coding downstream 264258 27800567 ~ 27833055 (+)
parp10 LOC106588595 coding downstream 300353 27836662 ~ 27848059 (+)
LOC110488198 LOC106570221 coding downstream 311918 27848227 ~ 27863819 (+)
LOC110488200 LOC106570222 coding downstream 335852 27872161 ~ 27996123 (+)
kcng2 LOC106570224 coding downstream 480257 28016566 ~ 28047334 (+)
G2313195 NA non-coding upstream 44679 27489728 ~ 27491272 (+)
G2313185 NA non-coding upstream 62129 27473518 ~ 27473822 (+)
G2313129 NA non-coding upstream 150532 27384832 ~ 27385419 (+)
G2313130 NA non-coding upstream 151225 27383083 ~ 27384726 (+)
G2313059 NA non-coding upstream 276200 27258969 ~ 27259751 (+)
G2313263 LOC106570219 non-coding downstream 54174 27590483 ~ 27653086 (+)
G2313453 NA non-coding downstream 360154 27896463 ~ 27961415 (+)
G2313457 NA non-coding downstream 367075 27903384 ~ 27903946 (+)
LOC110488207 NA non-coding downstream 547099 28083355 ~ 28091830 (+)
G2313197 NA other upstream 42216 27493099 ~ 27493735 (+)
G2312933 NA other upstream 496766 27033799 ~ 27039185 (+)
LOC110488193 LOC106570239 other upstream 715055 26816398 ~ 26820899 (+)
G2312752 NA other upstream 802306 26733304 ~ 26733645 (+)
G2314887 NA other downstream 983946 28520255 ~ 28563595 (+)
G2314987 NA other downstream 1162431 28698740 ~ 28703424 (+)
G2316421 NA other downstream 2386075 29922384 ~ 29931480 (+)
tmem79a LOC106569868 other downstream 3281719 30817937 ~ 30822555 (+)

Expression


Co-expression Network