LOC118946464


Basic Information

Item Value
gene id LOC118946464
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 29366427 ~ 29369552 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036970998.1
GAAAAGTCCATACTTGAGAAGTTAAATAGTTTGTATAATACATTTGGTTGAATTTGTTTAAATAGCCTGATTTTAATCATCAAGATGGTACGACCTTCGACTAACCTTTTGAGGACTACACAATGCATTTTAGTATTTGCCATCTCAGGTGCCCTGTGTGCCAGCTTCTTTCGAGTGCCCCGTTCAGTCACCCCAGCGGGTATGAGCACCACCCCCACAGCAAAAATGGCCTACCAGATCTGCTTGGAGATCATCAATCGTGTCTTCAATGACTCCCTGTTGAGTCCAAATTCTAAGGACTACAAGAAAATGTATGACGAGGTCAACCAATTGCTTGCTGAAGTCTATGGGTGTCGTACGTGCTCAACAGGATCCGTTTATGAGGGCATTGCAACAATGACTTTCAGTCATGGATCAGTGATAGCAAACGCTACCATAGTTTTCTACACAGAGGGTATCAATCAATGGGTGGTCAAGTATCTCTTCCTGAAACATATCAAAGACAATCCTTCTGCCGTTCTCCAGATAAATTCAAATTATACCGAATTTCAAGCAACACCAGTACCAGCCGTGGTTCCAAACATAACCATCCCCACCACACCTGCTAAAATCATAACAAATACGACTCCCAtgtctacaaccactactactaaccagccaacaaccactactactaaccagCCAACAAACACTACTACTAAACagccaacaaccactactactaaacaccaacaaccactactactaaccaccaacaaccactactactaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106588563 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036970998.1 True 771 mRNA 0.42 7 29366427 29369552

Neighbor

gene id symbol gene type direction distance location
LOC110488226 rpc7l coding upstream 142668 29215636 ~ 29223759 (+)
LOC110488225 LOC106588560 coding upstream 151286 29169839 ~ 29271629 (+)
LOC110489420 LOC106570197 coding upstream 323996 29017561 ~ 29042431 (+)
LOC110489419 ssr2 coding upstream 374768 28983188 ~ 28994465 (+)
LOC110488216 LOC106570190 coding upstream 895067 28468750 ~ 28471360 (+)
LOC110488231 NA coding downstream 117 29369669 ~ 29376118 (+)
LOC110488235 LOC106570205 coding downstream 69361 29438913 ~ 29447508 (+)
LOC110488238 LOC106570207 coding downstream 119325 29488877 ~ 29491478 (+)
LOC110488239 krit1 coding downstream 126503 29496055 ~ 29507318 (+)
LOC110488242 LOC106570209 coding downstream 145123 29514675 ~ 29520674 (+)
G2315787 NA non-coding upstream 15563 29350355 ~ 29350864 (+)
G2315786 NA non-coding upstream 16411 29349460 ~ 29350016 (+)
G2315770 NA non-coding upstream 38257 29326886 ~ 29328170 (+)
G2315734 NA non-coding upstream 64469 29266542 ~ 29301958 (+)
G2315772 NA non-coding downstream 24295 29393847 ~ 29395564 (+)
G2315818 NA non-coding downstream 36523 29406075 ~ 29406429 (+)
G2315788 NA non-coding downstream 46089 29415641 ~ 29418492 (+)
G2315844 NA non-coding downstream 91760 29461312 ~ 29461623 (+)
G2315929 NA non-coding downstream 225986 29595538 ~ 29628782 (+)
G2314987 NA other upstream 663003 28698740 ~ 28703424 (+)
G2314887 NA other upstream 802832 28520255 ~ 28563595 (+)
kcng2 LOC106570224 other upstream 1319093 28016566 ~ 28047334 (+)
G2313197 NA other upstream 1872692 27493099 ~ 27493735 (+)
LOC118946485 LOC106570234 other upstream 2163616 27197844 ~ 27202811 (+)
G2316421 NA other downstream 552832 29922384 ~ 29931480 (+)
tmem79a LOC106569868 other downstream 1448476 30817937 ~ 30822555 (+)
G2317455 NA other downstream 1464178 30833730 ~ 30835101 (+)
G2317562 LOC100196669 other downstream 1728067 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 1852565 31222117 ~ 31223562 (+)

Expression


Co-expression Network