LOC118946498


Basic Information

Item Value
gene id LOC118946498
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 30031607 ~ 30032059 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971564.1
acaaccactgcagccctaactacaacaactgctgctcctacgaccactgtaactccacaacctactacgacaaccagtgcagctcctactacaacaactgctgttctaacgaccacagtgactgcagcaccttctacattaactacaacttcagcacctacgacaaccacaacaacagcacctacaacaactgtagctgccacgacaactgcagctcttGCAACAGCATTaacatctacgacaaccactgcagccgtaacaacaacaactgctgctcctacgaccactacagctccagaacctattacgacaaccactgcagctcctgctacaacaactacaacaacttcagctcctacgacaaccacaacaacagcacctccaacaactgctactcctacgaccactgtaattccacaacctactacgacaaccagtgcagctcctactaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971564.1 True 453 mRNA 0.49 1 30031607 30032059

Neighbor

gene id symbol gene type direction distance location
LOC118946465 NA coding upstream 3950 30022055 ~ 30027657 (+)
LOC110488250 NA coding upstream 240046 29790669 ~ 29791561 (+)
LOC110489422 dus3l coding upstream 286022 29730204 ~ 29745585 (+)
LOC110488243 ifi44 coding upstream 351412 29672909 ~ 29680195 (+)
LOC110489421 NA coding upstream 374536 29655911 ~ 29657071 (+)
LOC118946528 NA coding downstream 45091 30077150 ~ 30077764 (+)
LOC118946499 NA coding downstream 67642 30099701 ~ 30100390 (+)
LOC110489425 LOC106569855 coding downstream 76157 29817983 ~ 30125310 (+)
LOC110488251 LOC106570151 coding downstream 146565 30178624 ~ 30183914 (+)
LOC110488252 LOC106569863 coding downstream 159416 30191475 ~ 30224642 (+)
G2316422 NA non-coding upstream 34298 29934770 ~ 29997309 (+)
G2316423 NA non-coding upstream 83893 29945567 ~ 29947714 (+)
G2316421 NA non-coding upstream 100127 29922384 ~ 29931480 (+)
G2316352 NA non-coding upstream 194462 29814712 ~ 29837145 (+)
G2316349 NA non-coding upstream 214042 29807661 ~ 29817565 (+)
G2316478 NA non-coding downstream 20001 30052060 ~ 30055050 (+)
G2316479 NA non-coding downstream 32831 30064890 ~ 30068961 (+)
G2316748 NA non-coding downstream 110768 30142827 ~ 30143131 (+)
G2316752 NA non-coding downstream 111542 30143601 ~ 30143938 (+)
G2316904 NA non-coding downstream 217236 30249295 ~ 30249553 (+)
G2314987 NA other upstream 1328183 28698740 ~ 28703424 (+)
G2314887 NA other upstream 1468012 28520255 ~ 28563595 (+)
kcng2 LOC106570224 other upstream 1984273 28016566 ~ 28047334 (+)
G2313197 NA other upstream 2537872 27493099 ~ 27493735 (+)
tmem79a LOC106569868 other downstream 785969 30817937 ~ 30822555 (+)
G2317455 NA other downstream 801671 30833730 ~ 30835101 (+)
G2317562 LOC100196669 other downstream 1065560 31097619 ~ 31127687 (+)
G2317685 LOC106569887 other downstream 1190058 31222117 ~ 31223562 (+)
LOC110488286 chtop other downstream 1302760 31334757 ~ 31340531 (+)

Expression


Co-expression Network