LOC110488283 (LOC106569891)


Basic Information

Item Value
gene id LOC110488283
gene name LOC106569891
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 31556480 ~ 31578762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560448.2
TTGTCTACTCTGTCGCGTTTTTCCGGAGAGGAGCCGGCAGGTGACAGTGAGGGTCTTCTTTACAGCATAGGTGCCAATTTatgtttctgtatttaatttgaaGATTTTGTTCACCTGAATTATTTAGAAATATGGCTTCCTTTTTGTCGGTCATCCCTCCTTTCTTGTTATCGGTTCTCATATTTTCTGGAGCGGTAGTCGCACGGGGTGATGTGCTCGAGTTAGGGGACGCAGATTTCGATTACCTGGCAGCGGAGCACGAGACCATGCTAGTGAAATTCTACGCTCCATGGTGTGGACATTGTAAGAAACTAGCCCCAGATTTTGAGACCGCAGCCACTCGACTGAAGGGGACAGTTCCACTTGCTAAGGTGGACTGCACAGCGAGCCCAGACACATGTGGGCGTTTTGGGGTCACAGGGTACCCCACGCTCAAGATCTTCAGAAACGGAGAAGATGCCTCGTCCTATGACGGGCCACGCTCCGCAGATGGCATTGTCCACTTCATGAAGAAGCAGGCTGGACCCAACTCTGTTACCCTGCGTAGGGAAGCAGATCTCGAGgcctttgtcaaccactttgacgCCAGTGTAGTGGGATTTTTTTCTGGGCCTGACAGTGGTCAGCTGGCAGAGTTTCTGAAGGCGGCCAGCGTCATGAGGGAGCACTTCCGCTTCGCCCACACCATCGACATGACCCTGGGCCTCAAACACGGGGTGGACACTGAGCGTGTTCTGCTGTTCAGACCCCCAAGACTGAGTAGTAAGTTTGAGGAGAGCGTGCTGCGCTTCACTGAGACGATCACCACCCACACACTGCGGCGCTTCATCAGAGACAACATTTTTGGAATGTGCCCCCATCTGACCAATGAGAACAGAGATAAGCTGAAGGGGCAGGACTTGTTGACTGCGTACTATGATTTGGACTACCTGCAGAACCCCAAAGGCACCAACTATTGGAGGAACAGGGTGATGAAGGTGGGTTCTCAGTTTGCGTCCCAGGGCCTGAGTTTTGCCGTGGCCAATCGCAGGGACTTTGTGGATGAACTGGAGGAGGAGTTTGGTCTGGGGTCGTCGGACGGAGGAGATCTACCCTTCGTAACCATCAGAACACAACAGGGATTCAAGTACACCATGAGGGAGGAGTTCACGCGAGATGGGAAGTCCCTGGAAAGATTCCTGGAGGATTACTTTGCTGGACGACTAAAACGTTACATCAAGTCGGAGCCCATCCCTGAGAAAAACAAAGGCCccgtcaagGTAGTGGTAGCGGAGTCATTTGAGGAGATTGTGAATGACCCGGAGAAGGACGTGCTGATTGAGTTCTATGCCCCCTGGTGTGGTCACTGTAAGAGCCTGGAGCCCAAGTACAAGGAGTTGGCAGAACAGCTCTACTCTGACCCTAATATTGTAATTGCCAAGATGGACGCCACAGCCAATGATGTTCCACAAGGCTTTGATGTGCAAGGGTTTCCCACCATCTACTTTGCTCAGGCAGGCAAGAAGGACCAGCCCAAGCGATATGAGGGAGCCCATGAAGTGAAGGACTTTATCAAGTACTTGAAGAGAGAATCCTCGCACGTTCCTGTTGTCAGCGGAGTGAGAGAAGACCTGTGAACAGAAGACAAAATCAAAATGAACATCAACGGCATCAACTCACCAAGGAGCAGTTTGGTGCAGGTTTGTCATACATCAAATACCATGAGATGAATGGACGTTGTATAATGACACTGTAATAACACATTTGTTTATAGGTCTTGACTTACCACCTGTATGTCAGAACTATAGGTCTTCTTCACCACTATAAGCCATACCATCCATTCCACCAATGATAACCCATCAACACCCCTAGATTGGCAGCTAATATTGAGCACTCTTTTGCATTGGCATTTCACAAAGCAGGAGCAAGGAGGTGGTCAGCTAACCTTGCTTGTGTAAAATAGTCTGAAATAGCTTCATATTAACTAGTTCCAAAAGGTACCCACTGGTCTTTTTATGTGTACTTGAGCTACAGAGTTGGTGTCATTCCACACAGCACCAACAACCAACCAACCGCTCACCACCTATCTGCCTACTGACTGCATACAAAACCCAAAACATCCCCACCCATTctcctttttttttgtccatgCAAATATCAAATTAACCATTTTGGAAATACTGCAAAGGCAATATTCAGATTAGTGGCAAAAATGACAAGTAGCCACCATGGTCTCCTTGAAAACAAATGTTTtcattttatgtttttgaatattcCGTTTTTTATTTATGTTTCTATCATTATATGCCATTTTcccctgatttttttttttagagcaAGTAACTTCTGAAAGGCATGTACAATGTTTGGATTTGACTATGAAGGCCAGATGTGTGTTATTTATCATATTTATTATATAGTATAGGCAATACAGTAATTCACTTTCTGTGTACTGTACATAATGTGTGAACATATTTGCAATCATAATTGTCTCTTTTTTGACAGAGCCTTTTGATTTATTGATGTACATTTTATTTGTTGCAAGAGTTTGGCACTCAGAGGACCCATTATCCTTAGTTTATTTTTGATCCGCTAAgaaatgtttgtctttggagtTTTCTCACTTAAAAGATGCTGAAACCATTTAATAAAATGACTGACTTCGA
>XM_036971463.1
TGTCTACTCTGTCGCGTTTTTCCGGAGAGGAGCCGGCAGGTGACAGTGAGGGTCTTCTTTACAGCATAGGTGCCAATTTatgtttctgtatttaatttgaaGATTTTGTTCACCTGAATTATTTAGAAATATGGCTTCCTTTTTGTCGGTCATCCCTCCTTTCTTGTTATCGGTTCTCATATTTTCTGGAGCGGTAGTCGCACGGGGTGATGTGCTCGAGTTAGGGGACGCAGATTTCGATTACCTGGCAGCGGAGCACGAGACCATGCTAGTGAAATTCTACGCTCCATGGTGTGGACATTGTAAGAAACTAGCCCCAGATTTTGAGACCGCAGCCACTCGACTGAAGGGGACAGTTCCACTTGCTAAGGTGGACTGCACAGCGAGCCCAGACACATGTGGGCGTTTTGGGGTCACAGGGTACCCCACGCTCAAGATCTTCAGAAACGGAGAAGATGCCTCGTCCTATGACGGGCCACGCTCCGCAGATGGCATTGTCCACTTCATGAAGAAGCAGGCTGGACCCAACTCTGTTACCCTGCGTAGGGAAGCAGATCTCGAGgcctttgtcaaccactttgacgCCAGTGTAGTGGGATTTTTTTCTGGGCCTGACAGTGGTCAGCTGGCAGAGTTTCTGAAGGCGGCCAGCGTCATGAGGGAGCACTTCCGCTTCGCCCACACCATCGACATGACCCTGGGCCTCAAACACGGGGTGGACACTGAGCGTGTTCTGCTGTTCAGACCCCCAAGACTGAGTAGTAAGTTTGAGGAGAGCGTGCTGCGCTTCACTGAGACGATCACCACCCACACACTGCGGCGCTTCATCAGAGACAACATTTTTGGAATGTGCCCCCATCTGACCAATGAGAACAGAGATAAGCTGAAGGGGCAGGACTTGTTGACTGCGTACTATGATTTGGACTACCTGCAGAACCCCAAAGGCACCAACTATTGGAGGAACAGGGTGATGAAGGTGGGTTCTCAGTTTGCGTCCCAGGGCCTGAGTTTTGCCGTGGCCAATCGCAGGGACTTTGTGGATGAACTGGAGGAGGAGTTTGGTCTGGGGTCGTCGGACGGAGGAGATCTACCCTTCGTAACCATCAGAACACAACAGGGATTCAAGTACACCATGAGGGAGGAGTTCACGCGAGATGGGAAGTCCCTGGAAAGATTCCTGGAGGATTACTTTGCTGGACGACTAAAACGTTACATCAAGTCGGAGCCCATCCCTGAGAAAAACAAAGGCCccgtcaagGTAGTGGTAGCGGAGTCATTTGAGGAGATTGTGAATGACCCGGAGAAGGACGTGCTGATTGAGTTCTATGCCCCCTGGTGTGGTCACTGTAAGAGCCTGGAGCCCAAGTACAAGGAGTTGGCAGAACAGCTCTACTCTGACCCTAATATTGTAATTGCCAAGATGGACGCCACAGCCAATGATGTTCCACAAGGCTTTGATGTGCAAGGGTTTCCCACCATCTACTTTGCTCAGGCAGGCAAGAAGGACCAGCCCAAGCGATATGAGGGAGCCCATGAAGTGAAGGACTTTATCAAGTACTTGAAGAGAGAATCCTCGCACGTTCCTGTTGTCAGCGGAGTGAGAGAAGACCTGTGAACAGAAGTAAGGCGATGGCAGGGGTGTATTATGGAAAATGTAGCTTAAGACCCCTGGAATTACGGTTGTGGATACTCACAACTTCTGCtaagattctttatttctgatGAAATGACACTCTAAAAACCTAAATCTACCAACAGTAATTTTGTTCCTTGAAACAATAGTTTTGAAAGTCACACAATTGACTCTCTAGGAACAGAGCCCCTTGTAATTGTTCAGGAGGAGAAATAACATTTCTACAGAGGAAGAGAAAACAAAGATTGAGGACTGCCAACCTCTAATGTCAAGTGACTTGGAAGGGAGATGAGGCTGATTGTCTTGGCATGAGACTGAACCAAACCTTCCCAATTTACTTTCATTAAAGGACAAAATCAAAATGAACATCAACGGCATCAACTCACCAAGGAGCAGTTTGGTGCAGGTTTGTCATACATCAAATACCATGAGATGAATGGACGTTGTATAATGACACTGTAATAACACATTTGTTTATAGGTCTTGACTTACCACCTGTATGTCAGAACTATAGGTCTTCTTCACCACTATAAGCCATACCATCCATTCCACCAATGATAACCCATCAACACCCCTAGATTGGCAGCTAATATTGAGCACTCTTTTGCATTGGCATTTCACAAAGCAGGAGCAAGGAGGTGGTCAGCTAACCTTGCTTGTGTAAAATAGTCTGAAATAGCTTCATATTAACTAGTTCCAAAAGGTACCCACTGGTCTTTTTATGTGTACTTGAGCTACAGAGTTGGTGTCATTCCACACAGCACCAACAACCAACCAACCGCTCACCACCTATCTGCCTACTGACTGCATACAAAACCCAAAACATCCCCACCCATTctcctttttttttgtccatgCAAATATCAAATTAACCATTTTGGAAATACTGCAAAGGCAATATTCAGATTAGTGGCAAAAATGACAAGTAGCCACCATGGTCTCCTTGAAAACAAATGTTTtcattttatgtttttgaatattcCGTTTTTTATTTATGTTTCTATCATTATATGCCATTTTcccctgatttttttttttagagcaAGTAACTTCTGAAAGGCATGTACAATGTTTGGATTTGACTATGAAGGCCAGATGTGTGTTATTTATCATATTTATTATATAGTATAGGCAATACAGTAATTCACTTTCTGTGTACTGTACATAATGTGTGAACATATTTGCAATCATAATTGTCTCTTTTTTGACAGAGCCTTTTGATTTATTGATGTACATTTTATTTGTTGCAAGAGTTTGGCACTCAGAGGACCCATTATCCTTAGTTTATTTTTGATCCGCTAAgaaatgtttgtctttggagtTTTCTCACTTAAAAGATGCTGAAACCATTTAATAAAATGACTGACTTCGA

Function

NR:

description
protein disulfide-isomerase A3-like

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0006662 glycerol ether metabolic process biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0015035 protein disulfide oxidoreductase activity molecular_function
GO:0016853 isomerase activity molecular_function

KEGG:

id description
K08056 PDIA3, GRP58; protein disulfide-isomerase A3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560448.2 False 2645 mRNA 0.46 14 31556480 31578762
XM_036971463.1 True 3005 mRNA 0.45 13 31556481 31578762

Neighbor

gene id symbol gene type direction distance location
LOC110488276 LOC106569890 coding upstream 14077 31522250 ~ 31542403 (+)
LOC110488278 LOC106569880 coding upstream 38696 31497450 ~ 31517784 (+)
LOC110488277 LOC106569878 coding upstream 70746 31370711 ~ 31485734 (+)
LOC110488285 LOC106569884 coding upstream 203585 31345247 ~ 31352895 (+)
LOC110488286 chtop coding upstream 215950 31334757 ~ 31340531 (+)
LOC110488282 LOC106569895 coding downstream 245 31579007 ~ 31592755 (+)
glmp glmp coding downstream 14196 31592958 ~ 31598248 (+)
LOC118946484 jtb coding downstream 38357 31617119 ~ 31621139 (+)
LOC110488287 LOC106569900 coding downstream 121888 31700650 ~ 31711516 (+)
LOC110488296 LOC106569903 coding downstream 236065 31814827 ~ 31826946 (+)
G2317877 NA non-coding upstream 7567 31548698 ~ 31548913 (+)
G2317874 NA non-coding upstream 10081 31546186 ~ 31546399 (+)
G2317870 NA non-coding upstream 13424 31542830 ~ 31543056 (+)
G2317869 NA non-coding upstream 24517 31531745 ~ 31531963 (+)
G2317868 NA non-coding upstream 26541 31529641 ~ 31529939 (+)
G2317893 NA non-coding downstream 5498 31584260 ~ 31588161 (+)
G2318573 NA non-coding downstream 49013 31627775 ~ 31628006 (+)
G2318583 NA non-coding downstream 56142 31634904 ~ 31635122 (+)
G2318586 NA non-coding downstream 57964 31636726 ~ 31636981 (+)
G2318597 LOC100136012 non-coding downstream 63136 31641898 ~ 31642169 (+)
G2317685 LOC106569887 other upstream 332918 31222117 ~ 31223562 (+)
G2317562 LOC100196669 other upstream 428793 31097619 ~ 31127687 (+)
G2317455 NA other upstream 721379 30833730 ~ 30835101 (+)
tmem79a LOC106569868 other upstream 737464 30817937 ~ 30822555 (+)
LOC110488305 LOC106569913 other downstream 356121 31934883 ~ 31988737 (+)
G2318792 NA other downstream 374860 31953622 ~ 31954513 (+)
G2319921 NA other downstream 1363441 32942203 ~ 32943392 (+)
LOC110487593 LOC106570137 other downstream 1590701 33166851 ~ 33175323 (+)

Expression


Co-expression Network