LOC118946484 (jtb)


Basic Information

Item Value
gene id LOC118946484
gene name jtb
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 31617119 ~ 31621139 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036971248.1
CTAATGACACCGGGTCAACCAGGATGCAACGCATTTGAAGACGTACGGTTACGTATTCATTAGCGTTTCCAACATGACTCAAAATGGCGGTGCACTTCTCCACTAAACGGCTATTCAAGGACTGAACGAAAACAACAAAATCACACTAAGTCTTTGTTTCAGCCATTTTGGACCATAGAGAATAATTCCACGATGACAAGCTTCAGGCCTTGGTTGTAATTGTGGCACACACCACACGCACCTGCATGGGGAGGATGGAGAGCGATTGCAGGATCCCCATGTCGTGTTTGAGGCCCAGAATCCTGGCCTTGCATGCACTCTTCTGGGTTTTGGTGTCTCTCAGAGTGTTTGGTGCAGCTCTGCTGAGTGAGGAGAAGACCACAGTGGCCAGGCCGGTAACCACCCCCTGTTGGCAGATGGAGGAGTTTGTGGTTGCAGTGGAATGCTCCCGGTGCAACACTTTACAGTCGAAGTCGTGGGCAGCATGTATTCAGACGGGATACGCGGAGAGGATCAACTGCACCAAGTCTAATAAAGATGAGTACAAGAGCTGCCGCTCTACCCTGATGGAGGAACACCTTTTCTGGAAGTTTGAAGGAGCCACGTTGGGCCTCACCATACTATTTGCGCTCATAGTGGTCGCTAGGCAACGTTCGCTGGACCGGCTTGCCTCCGAGAAAGTCCGCAGGCAGATCGAGTCCATCTAGCGCAGTACACCAGAGTGAAGAGACTAGTAGAACTCACCATGGTGGCTCATCTCAACATTTCAAACTGTTAAGAATTACCACAGCCGCTCCATTTCAACAGCATGGGGGCCTGGAGAACGTAATGTTCAATGGACCAGACTTAGTAGAAAACTGTTtcccttttttggggggggggggggggggggggggggttgttgaagAAATTAGGCCTGACAGTAACAAGCTTATAAAATCAAGATTGACAGTGAAACTCCAGCTCTAATTTTAACCCGCCAAAGCACAAATGGTGAACAGTGTCTGGCGTTTTGTCAATGGAATGAATAACCCTAAAGGGAATGGCTCTTCTGAGCAGGCAACTTGCAGTACTTTGATCTGGACAAAGTGATGAACGGGAACTGACTGCATTCTAAGTAGCAGTTCAAGCCACATACATTTCTTTGACATCTTTTGGGGTGGACTGAAACCTGTGTGAAACCTGTGTTGAATATACAGAATTGTCTGACAAATGCCAGAGACGTTTCTGGCACATGTTTCTGTTCTCTGAGAGAACCAATAATCTCATCTAGTGTCAAATGCCCTGTCTGACTTGGAAACATGGCCAAATAACTAGCTCTGTGACTCAAGTGGATCTAGAATCTGTCTTATAGGGGGATGAGTGTTGCAGTGTTACTGTGTACTGTTGTATGAGTTTCATGCTGCAGTGCTGTTTTTCACCTCCATGGGATTCATATTTCCAAGATTCAGTATTGGTGTTCTGCCAAAAGTCTATAATCACTAGGTTGTGAAAGGTGAAATCTTGTGTGTTTGGAGATTCCAGGCATGGTTCTAAACACAAACACTGACATTTGACTACTTTTTCATAAGAGTATAGCGTTAtccaatacacacaaacacactgcacaTATTTCTTTCTGTTTTCATTCATTTAAAAACTTAGTTGCATTTCCGCTGATGGAGACTCACTTTTTTCGACTCCCCTAGTAGGCTCCTAGTAACATTGGTCTCTGAGCTCAGTGATTGCCAGTATTTTATCATGGTTTTACATTTCaactgtaaataatgtatttttaggAATTATGTGACGTGTTTTCCAGCCTCAGCAGCTCTCAAAGAGTTGAGAATTCTGCAAGAATAAATGGAAAATCGGACAACA
>XM_036971247.1
GATGCAACGCATTTGAAGACGTACGGTTACGTATTCATTAGCGTTTCCAACATGACTCAAAATGGCGGTGCACTTCTCCACTAAACGGCTATTCAAGGACTGAACGAAAACAACAAAATCACACTAAGTCTTTGTGAGACATCTGTTAAGGTTTCAGCCATTTTGGACCATAGAGAATAATTCCACGATGACAAGCTTCAGGCCTTGGTTGTAATTGTGGCACACACCACACGCACCTGCATGGGGAGGATGGAGAGCGATTGCAGGATCCCCATGTCGTGTTTGAGGCCCAGAATCCTGGCCTTGCATGCACTCTTCTGGGTTTTGGTGTCTCTCAGAGTGTTTGGTGCAGCTCTGCTGAGTGAGGAGAAGACCACAGTGGCCAGGCCGGTAACCACCCCCTGTTGGCAGATGGAGGAGTTTGTGGTTGCAGTGGAATGCTCCCGGTGCAACACTTTACAGTCGAAGTCGTGGGCAGCATGTATTCAGACGGGATACGCGGAGAGGATCAACTGCACCAAGTCTAATAAAGATGAGTACAAGAGCTGCCGCTCTACCCTGATGGAGGAACACCTTTTCTGGAAGTTTGAAGGAGCCACGTTGGGCCTCACCATACTATTTGCGCTCATAGTGGTCGCTAGGCAACGTTCGCTGGACCGGCTTGCCTCCGAGAAAGTCCGCAGGCAGATCGAGTCCATCTAGCGCAGTACACCAGAGTGAAGAGACTAGTAGAACTCACCATGGTGGCTCATCTCAACATTTCAAACTGTTAAGAATTACCACAGCCGCTCCATTTCAACAGCATGGGGGCCTGGAGAACGTAATGTTCAATGGACCAGACTTAGTAGAAAACTGTTtcccttttttggggggggggggggggggggggggggttgttgaagAAATTAGGCCTGACAGTAACAAGCTTATAAAATCAAGATTGACAGTGAAACTCCAGCTCTAATTTTAACCCGCCAAAGCACAAATGGTGAACAGTGTCTGGCGTTTTGTCAATGGAATGAATAACCCTAAAGGGAATGGCTCTTCTGAGCAGGCAACTTGCAGTACTTTGATCTGGACAAAGTGATGAACGGGAACTGACTGCATTCTAAGTAGCAGTTCAAGCCACATACATTTCTTTGACATCTTTTGGGGTGGACTGAAACCTGTGTGAAACCTGTGTTGAATATACAGAATTGTCTGACAAATGCCAGAGACGTTTCTGGCACATGTTTCTGTTCTCTGAGAGAACCAATAATCTCATCTAGTGTCAAATGCCCTGTCTGACTTGGAAACATGGCCAAATAACTAGCTCTGTGACTCAAGTGGATCTAGAATCTGTCTTATAGGGGGATGAGTGTTGCAGTGTTACTGTGTACTGTTGTATGAGTTTCATGCTGCAGTGCTGTTTTTCACCTCCATGGGATTCATATTTCCAAGATTCAGTATTGGTGTTCTGCCAAAAGTCTATAATCACTAGGTTGTGAAAGGTGAAATCTTGTGTGTTTGGAGATTCCAGGCATGGTTCTAAACACAAACACTGACATTTGACTACTTTTTCATAAGAGTATAGCGTTAtccaatacacacaaacacactgcacaTATTTCTTTCTGTTTTCATTCATTTAAAAACTTAGTTGCATTTCCGCTGATGGAGACTCACTTTTTTCGACTCCCCTAGTAGGCTCCTAGTAACATTGGTCTCTGAGCTCAGTGATTGCCAGTATTTTATCATGGTTTTACATTTCaactgtaaataatgtatttttaggAATTATGTGACGTGTTTTCCAGCCTCAGCAGCTCTCAAAGAGTTGAGAATTCTGCAAGAATAAATGGAAAATCGGACAACA
>XM_036971249.1
GATGCAACGCATTTGAAGACGTACGGTTACGTATTCATTAGCGTTTCCAACATGACTCAAAATGGCGGTGCACTTCTCCACTAAACGGCTATTCAAGGACTGAACGAAAACAACAAAATCACACTAAGTCTTTGTGAGACATCTGTTAAGGTTTCAGCCATTTTGGACCATAGAGAATAATTCCACGATGACAAGCTTCAGGCCTTGGTTGTAATTGTGGCACACACCACACGCACCTGCATGGGGAGGATGGAGAGCGATTGCAGGATCCCCATGTCGTGTTTGAGGCCCAGAATCCTGGCCTTGCATGCACTCTTCTGGGTTTTGGTGTCTCTCAGAGTGTTTGGTGCAGCTCTGCTGAGTGAGGAGAAGACCACAGTGGCCAGGCCGGTAACCACCCCCTGTTGGCAGATGGAGGAGTTTGTGGTTGCAGTGGAATGCTCCCGGTGCAACACTTTACAGTCGTCGTGGGCAGCATGTATTCAGACGGGATACGCGGAGAGGATCAACTGCACCAAGTCTAATAAAGATGAGTACAAGAGCTGCCGCTCTACCCTGATGGAGGAACACCTTTTCTGGAAGTTTGAAGGAGCCACGTTGGGCCTCACCATACTATTTGCGCTCATAGTGGTCGCTAGGCAACGTTCGCTGGACCGGCTTGCCTCCGAGAAAGTCCGCAGGCAGATCGAGTCCATCTAGCGCAGTACACCAGAGTGAAGAGACTAGTAGAACTCACCATGGTGGCTCATCTCAACATTTCAAACTGTTAAGAATTACCACAGCCGCTCCATTTCAACAGCATGGGGGCCTGGAGAACGTAATGTTCAATGGACCAGACTTAGTAGAAAACTGTTtcccttttttggggggggggggggggggggggggggttgttgaagAAATTAGGCCTGACAGTAACAAGCTTATAAAATCAAGATTGACAGTGAAACTCCAGCTCTAATTTTAACCCGCCAAAGCACAAATGGTGAACAGTGTCTGGCGTTTTGTCAATGGAATGAATAACCCTAAAGGGAATGGCTCTTCTGAGCAGGCAACTTGCAGTACTTTGATCTGGACAAAGTGATGAACGGGAACTGACTGCATTCTAAGTAGCAGTTCAAGCCACATACATTTCTTTGACATCTTTTGGGGTGGACTGAAACCTGTGTGAAACCTGTGTTGAATATACAGAATTGTCTGACAAATGCCAGAGACGTTTCTGGCACATGTTTCTGTTCTCTGAGAGAACCAATAATCTCATCTAGTGTCAAATGCCCTGTCTGACTTGGAAACATGGCCAAATAACTAGCTCTGTGACTCAAGTGGATCTAGAATCTGTCTTATAGGGGGATGAGTGTTGCAGTGTTACTGTGTACTGTTGTATGAGTTTCATGCTGCAGTGCTGTTTTTCACCTCCATGGGATTCATATTTCCAAGATTCAGTATTGGTGTTCTGCCAAAAGTCTATAATCACTAGGTTGTGAAAGGTGAAATCTTGTGTGTTTGGAGATTCCAGGCATGGTTCTAAACACAAACACTGACATTTGACTACTTTTTCATAAGAGTATAGCGTTAtccaatacacacaaacacactgcacaTATTTCTTTCTGTTTTCATTCATTTAAAAACTTAGTTGCATTTCCGCTGATGGAGACTCACTTTTTTCGACTCCCCTAGTAGGCTCCTAGTAACATTGGTCTCTGAGCTCAGTGATTGCCAGTATTTTATCATGGTTTTACATTTCaactgtaaataatgtatttttaggAATTATGTGACGTGTTTTCCAGCCTCAGCAGCTCTCAAAGAGTTGAGAATTCTGCAAGAATAAATGGAAAATCGGACAACA
>TU2650828
TTCATTAGCGTTTCCAACATGACTCAAAATGGCGGTGCACTTCTCCACTAAACGGCTATTCAAGGACTGAACGAAAACAACAAAATCACACTAAGTCTTTGTGAGACATCTGTTAAGGTTTCAGCCATTTTGGACCATAGAGAATAATTCCACGATGACAAGCTTCAGGCCTTGGTTGTAATTGTGGCACACACCACACGCACCTGCATGGGGAGGATGGAGAGCGATTGCAGGATCCCCATGTCGTGTTTGAGGCCCAGAATCCTGGCCTTGCATGCACTCTTCTGGGTTTTGGTGTCTCTCAGAGTGTTTGGTGCAGCTCTGCTGAGTGAGGAGAAGACCACAGGTGCTATACTTTTTTATCAGTATTTGATAAGAATGAGTTGGAGAACATGAGTACAGGATTGATGTGGTGCTGCAAACATAAATGCCAGTGACTGCTCATACATCGTTTGTATAGCAAGTTAGCAACACAGTTCACAGAGAAGcacatgtttgtgtgtggggcTGATAAACTGGAGCTTCTACTTCACCCGTGTCAGGGGTATAAACAAAAGTGTCACTGGTCATGTCATTCAGCATAATTTCTGTCAAAACTATTCTCAGTCCTTTTCAGATACTGATTCAAGGCATTGTGTTTCGCCTGTGTTTTAGTGGCCAGGCCGGTAACCACCCCCTGTTGGCAGATGGAGGAGTTTGTGGTTGCAGTGGAATGCTCCCGGTGCAACACTTTACAGTCGAAGTCGTGGGCAGCATGTATTCAGACGGGATACGCGGAGAGGATCAACTGCACCAAGTCTAATAAAGATGAGTACAAGAGCTGCCGCTCTACCCTGATGGAGGAACACCTTTTCTGGAAGTTTGAAGGAGCCACGTTGGGCCTCACCATACTATTTGCGCTCATAGTGGTCGCTAGGCAACGTTCGCTGGACCGGCTTGCCTCCGAGAAAGTCCGCAGGCAGATCGAGTCCATCTAGCGCAGTACACCAGAGTGAAGAGACTAGTAGAACTCACCATGGTGGCTCATCTCAACATTTCAAACTGTTAAGAATTACCACAGCCGCTCCATTTCAACAGCATGGGGGCCTGGAGAACGTAATGTTCAATGGACCAGACTTAGTAGAAAACTGTTtcccttttttggggggggggggggggggggggggggttgttgaagAAATTAGGCCTGACAGTAACAAGCTTATAAAATCAAGATTGACAGTGAAACTCCAGCTCTAATTTTAACCCGCCAAAGCACAAATGGTGAACAGTGTCTGGCGTTTTGTCAATGGAATGAATAACCCTAAAGGGAATGGCTCTTCTGAGCAGGCAACTTGCAGTACTTTGATCTGGACAAAGTGATGAACGGGAACTGACTGCATTCTAAGTAGCAGTTCAAGCCACATACATTTCTTTGACATCTTTTGGGGTGGACTGAAACCTGTGTGAAACCTGTGTTGAATATACAGAATTGTCTGACAAATGCCAGAGACGTTTCTGGCACATGTTTCTGTTCTCTGAGAGAACCAATAATCTCATCTAGTGTCAAATGCCCTGTCTGACTTGGAAACATGGCCAAATAACTAGCTCTGTGACTCAAGTGGATCTAGAATCTGTCTTATAGGGGGATGAGTGTTGCAGTGTTACTGTGTACTGTTGTATGAGTTTCATGCTGCAGTGCTGTTTTTCACCTCCATGGGATTCATATTTCCAAGATTCAGTATTGGTGTTCTGCCAAAAGTCTATAATCACTAGGTTGTGAAAGGTGAAATCTTGTGTGTTTGGAGATTCCAGGCATGGTTCTAAACACAAACACTGACATTTGACTACTTTTTCATAAGAGTATAGCGTTAtccaatacacacaaacacactgcacaTATTTCTTTCTGTTTTCATTCATTTAAAAACTTAGTTGCATTTCCGCTGATGGAGACTCACTTTTTTCGACTCCCCTAGTAGGCTCCTAGTAACATTGGTCTCTGAGCTCAGTGATTGCCAGTATTTTATCATGGTTTTACATTTCaactgtaaataatgtatttttaggAATTATGTGACGTGTTTTCCAGCCTCAGCAGCTCTCAAAGAGTTGAGAATTCTGCAAGAATAAATGGAAAATCGGACAA

Function

symbol description
jtb Predicted to be involved in mitotic cytokinesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and midbody. Predicted to colocalize with centrosome and spindle. Orthologous to human JTB (jumping translocation breakpoint).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036971248.1 False 1860 mRNA 0.45 6 31617119 31621139
XM_036971247.1 False 1855 mRNA 0.45 6 31617141 31621139
XM_036971249.1 False 1852 mRNA 0.45 6 31617141 31621139
TU2650828 True 2128 TUCP 0.44 5 31617174 31621137

Neighbor

gene id symbol gene type direction distance location
glmp glmp coding upstream 18871 31592958 ~ 31598248 (+)
LOC110488282 LOC106569895 coding upstream 24364 31579007 ~ 31592755 (+)
LOC110488283 LOC106569891 coding upstream 38357 31556480 ~ 31578762 (+)
LOC110488276 LOC106569890 coding upstream 74716 31522250 ~ 31542403 (+)
LOC110488278 LOC106569880 coding upstream 99335 31497450 ~ 31517784 (+)
LOC110488287 LOC106569900 coding downstream 79511 31700650 ~ 31711516 (+)
LOC110488296 LOC106569903 coding downstream 193688 31814827 ~ 31826946 (+)
LOC110488297 LOC106569902 coding downstream 207049 31828188 ~ 31855884 (+)
LOC110488300 LOC106569907 coding downstream 246836 31867975 ~ 31888423 (+)
LOC110488301 LOC106569908 coding downstream 268928 31890067 ~ 31909751 (+)
G2317893 NA non-coding upstream 28958 31584260 ~ 31588161 (+)
G2317877 NA non-coding upstream 68206 31548698 ~ 31548913 (+)
G2317874 NA non-coding upstream 70720 31546186 ~ 31546399 (+)
G2317870 NA non-coding upstream 74063 31542830 ~ 31543056 (+)
G2317869 NA non-coding upstream 85156 31531745 ~ 31531963 (+)
G2318573 NA non-coding downstream 6636 31627775 ~ 31628006 (+)
G2318583 NA non-coding downstream 13765 31634904 ~ 31635122 (+)
G2318586 NA non-coding downstream 15587 31636726 ~ 31636981 (+)
G2318597 LOC100136012 non-coding downstream 20759 31641898 ~ 31642169 (+)
G2318607 NA non-coding downstream 28714 31649853 ~ 31650084 (+)
LOC110488286 chtop other upstream 276588 31334757 ~ 31340531 (+)
G2317685 LOC106569887 other upstream 393557 31222117 ~ 31223562 (+)
G2317562 LOC100196669 other upstream 489432 31097619 ~ 31127687 (+)
G2317455 NA other upstream 782018 30833730 ~ 30835101 (+)
tmem79a LOC106569868 other upstream 798103 30817937 ~ 30822555 (+)
LOC110488305 LOC106569913 other downstream 313744 31934883 ~ 31988737 (+)
G2318792 NA other downstream 332483 31953622 ~ 31954513 (+)
G2319921 NA other downstream 1321064 32942203 ~ 32943392 (+)
LOC110487593 LOC106570137 other downstream 1548324 33166851 ~ 33175323 (+)
G2320160 NA other downstream 1830020 33451159 ~ 33451620 (+)

Expression


Co-expression Network