Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118946466 |
| gene name | LOC106570022 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 32372554 ~ 32376549 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110488310 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036971003.1 | True | 1014 | mRNA | 0.54 | 11 | 32372554 | 32376549 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946529 | LOC106569920 | coding | upstream | 17 | 32371806 ~ 32372537 (+) |
| LOC110489447 | LOC106570022 | coding | upstream | 2990 | 32366574 ~ 32369564 (+) |
| LOC110488308 | LOC106569916 | coding | upstream | 18710 | 32220923 ~ 32353844 (+) |
| LOC110488302 | LOC106569910 | coding | upstream | 404158 | 31955665 ~ 31968396 (+) |
| LOC110488305 | LOC106569913 | coding | upstream | 433841 | 31934883 ~ 31988737 (+) |
| LOC110488310 | LOC106570022 | coding | downstream | 506 | 32373725 ~ 32388367 (+) |
| LOC118946461 | NA | coding | downstream | 18515 | 32395064 ~ 32398502 (+) |
| LOC110488315 | NA | coding | downstream | 77358 | 32453907 ~ 32459072 (+) |
| LOC110488320 | NA | coding | downstream | 232736 | 32609285 ~ 32614559 (+) |
| LOC110488322 | LOC106569928 | coding | downstream | 284468 | 32660576 ~ 32683300 (+) |
| G2319356 | NA | non-coding | upstream | 14638 | 32357424 ~ 32357916 (+) |
| G2319106 | NA | non-coding | upstream | 280171 | 32092129 ~ 32092383 (+) |
| G2318851 | tp8l2 | non-coding | upstream | 330728 | 32039690 ~ 32041826 (+) |
| G2318776 | NA | non-coding | upstream | 420055 | 31946646 ~ 31952499 (+) |
| G2319371 | NA | non-coding | downstream | 5131 | 32381680 ~ 32382325 (+) |
| G2319374 | NA | non-coding | downstream | 11989 | 32388538 ~ 32388739 (+) |
| G2319381 | NA | non-coding | downstream | 15919 | 32392468 ~ 32392842 (+) |
| G2319419 | LOC106569924 | non-coding | downstream | 82669 | 32459218 ~ 32461907 (+) |
| G2318792 | NA | other | upstream | 418041 | 31953622 ~ 31954513 (+) |
| LOC118946484 | jtb | other | upstream | 751417 | 31617119 ~ 31621139 (+) |
| LOC110488286 | chtop | other | upstream | 1032023 | 31334757 ~ 31340531 (+) |
| G2317685 | LOC106569887 | other | upstream | 1148992 | 31222117 ~ 31223562 (+) |
| G2319921 | NA | other | downstream | 565654 | 32942203 ~ 32943392 (+) |
| LOC110487593 | LOC106570137 | other | downstream | 792914 | 33166851 ~ 33175323 (+) |
| G2320160 | NA | other | downstream | 1074610 | 33451159 ~ 33451620 (+) |
| G2321378 | LOC106569991 | other | downstream | 1960561 | 34337110 ~ 34354024 (+) |
| G2321656 | LOC105025880 | other | downstream | 2472629 | 34849178 ~ 34850391 (+) |
