LOC118946458


Basic Information

Item Value
gene id LOC118946458
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 33927655 ~ 33939393 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041291.1
TGGTGCTGTTTtatattaaagctgcaatatgtaactttttggggacccgaccaaatgcacatagaaatgtgtCATAGACATGTTATTCTCGTTGAAAGCAAGTCCAAGAAGCGGTATATCTGTTCTGTTCTTAAATTTAGTTTTTgaatcttttactttcagttttgtacactaGTTTAGGACAATGCAGAAGGCTCAGAGCGgtctggtaggctgtttggtgGTTTAAGCCAGCTGGATTTAGGACCGCAAGGACACCACAGAGCGTGCGAACAGAAGCAGCTATTGCCTGTGTGTTATGCTTTTTCTCTGAGTTGTAAAAGTAAGCAGAGCAGAAACGGGCTACTCTTTTTATTTAactgatgtagctggcaagAAGCCCATCGTCATCAGCGGCAGCATGGCAATGTTGACCATACCTCTTCTGCTCTGTGCGGCCGTTGCTCTGAGTAGCGCAGCAGGCAAGACACACATTCTTGTTTCAGAACCTTTATTGGAGGGAAACATGGAGCAAACCCCCCCTATTGTGAGGATATGGATGATGAGGGAAACACCTTTAAACAGAACCCACCTCTTGAAAGCCTTGAGGAGATGATAGACTTTGAGCAGACATTGCCTCTGCACAGTTCCAGCAACAATTATGGATTggccaaattcaaaacaggtgCAGACTTGAGAAATGCACACACCAAGTCAAGGGGTTGTGGCTTTCTCCAGCAAAGGATTTGAAATAAGACCTAACAAAAATAAAGTAAATATCCAAAAAATTTAATCATCAAGAAAGTAATCATCAAGTCTATATTCTTGGTTTGCTATGTGTCTTGCCTGCTGCACCATTCAGACCAAAGGCAGCAGAGAGCAGAAGAGAAATGGTTGACATCGCCATGGGGATGATGGGGTCCTAAATACTAGATAGAGAGTCAGAGGGAAATAATGGCGGAAACAATCAgaattcagtgaaaataaaacagCAAAGTAAATGGATTATTTATTGAGTAGAGGACTTACCGGTTGCATTACGTCACTACATGACTGTAAGGGTTGCGGAACTGGTGGTagtgaagtcagacgcaggagagcagaaataggtaatagccggagcaaTTTAATTTCAAAACCAAcggcaataaaaaaaataacctacatgggtacaaaacctgaTGCTCACCAGTAACatagtgcacaagcacttacaaacaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041291.1 True 1203 mRNA 0.42 6 33927655 33939393

Neighbor

gene id symbol gene type direction distance location
LOC110488361 LOC106569969 coding downstream 398404 33517551 ~ 33529251 (-)
LOC110488358 LOC106569966 coding downstream 432748 33489584 ~ 33494907 (-)
LOC110488357 LOC106569964 coding downstream 439189 33479769 ~ 33488466 (-)
LOC110488354 NA coding downstream 479893 33436455 ~ 33447762 (-)
LOC110488353 NA coding downstream 502193 33413400 ~ 33425462 (-)
LOC110488376 enog coding upstream 209017 34148410 ~ 34172660 (-)
LOC110489333 NA coding upstream 315222 34254615 ~ 34255550 (-)
LOC110512058 LOC106570022 coding upstream 318071 34257464 ~ 34262009 (-)
LOC110489327 LOC106570163 coding upstream 354795 34294188 ~ 34302804 (-)
LOC110489274 LOC106569990 coding upstream 364483 34303876 ~ 34320380 (-)
G2321123 NA non-coding downstream 2629 33924709 ~ 33925026 (-)
G2321120 NA non-coding downstream 5131 33922188 ~ 33922524 (-)
G2321119 NA non-coding downstream 8429 33919022 ~ 33919226 (-)
G2321116 NA non-coding downstream 11087 33916225 ~ 33916568 (-)
G2321113 NA non-coding downstream 14592 33912824 ~ 33913063 (-)
G2321155 NA non-coding upstream 35923 33975316 ~ 33975547 (-)
G2321168 NA non-coding upstream 54462 33993855 ~ 33994161 (-)
G2321172 NA non-coding upstream 61194 34000587 ~ 34000887 (-)
G2321177 NA non-coding upstream 67749 34007142 ~ 34007393 (-)
G2321178 NA non-coding upstream 68079 34007472 ~ 34007759 (-)
G2320761 NA other downstream 515153 33410499 ~ 33412502 (-)
G2320755 onmy-uea other downstream 532563 33363312 ~ 33395092 (-)
G2320623 NA other downstream 977717 32917502 ~ 32949938 (-)
G2322234 NA other upstream 421690 34361083 ~ 34361388 (-)
LOC110489328 LOC105025867 other upstream 559633 34499026 ~ 34506457 (-)
LOC110487602 LOC106570003 other upstream 726426 34662296 ~ 34715706 (-)
G2322701 LOC106588461 other upstream 1245491 35184884 ~ 35192129 (-)
LOC110489319 LOC106570022 other upstream 1413395 35352788 ~ 35356932 (-)

Expression


Co-expression Network