Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110487599 |
| gene name | LOC106569987 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 34206176 ~ 34231853 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: chromodomain-helicase-DNA-binding protein 4-like isoform X16 |
| id | description |
|---|---|
| K11643 | CHD4, MI2B; chromodomain-helicase-DNA-binding protein 4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036970762.1 | False | 6543 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970763.1 | False | 6540 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970764.1 | False | 6540 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970765.1 | False | 6540 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970766.1 | False | 6534 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970767.1 | False | 6531 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970768.1 | False | 6531 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970769.1 | False | 6528 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970771.1 | False | 6528 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970772.1 | False | 6522 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970773.1 | False | 6519 | mRNA | 0.56 | 41 | 34206176 | 34231853 |
| XM_036970774.1 | False | 6519 | mRNA | 0.56 | 42 | 34206176 | 34231853 |
| XM_036970775.1 | False | 6507 | mRNA | 0.56 | 41 | 34206176 | 34231853 |
| XM_036970776.1 | False | 6504 | mRNA | 0.56 | 41 | 34206176 | 34231853 |
| XM_036970777.1 | False | 6483 | mRNA | 0.56 | 41 | 34206176 | 34231853 |
| XM_036970778.1 | False | 6480 | mRNA | 0.56 | 41 | 34206176 | 34231853 |
| XM_036970779.1 | False | 6456 | mRNA | 0.56 | 41 | 34206176 | 34231853 |
| XM_036970780.1 | False | 6444 | mRNA | 0.56 | 40 | 34206176 | 34231853 |
| XM_036970782.1 | True | 6417 | mRNA | 0.56 | 40 | 34206176 | 34231853 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110488377 | LOC105025850 | coding | upstream | 12520 | 34171145 ~ 34193656 (+) |
| LOC110488374 | LOC106569985 | coding | upstream | 60734 | 34135781 ~ 34145442 (+) |
| LOC110488373 | LOC106570161 | coding | upstream | 74190 | 34126252 ~ 34131986 (+) |
| LOC110487598 | NA | coding | upstream | 99462 | 34096452 ~ 34106714 (+) |
| LOC110488372 | LOC106569982 | coding | upstream | 124524 | 34055948 ~ 34081652 (+) |
| LOC110489266 | LOC106569989 | coding | downstream | 41454 | 34273307 ~ 34286246 (+) |
| LOC110489288 | f131b | coding | downstream | 142265 | 34374118 ~ 34395409 (+) |
| LOC110489290 | LOC106569995 | coding | downstream | 212299 | 34444152 ~ 34462496 (+) |
| LOC110489308 | LOC106570000 | coding | downstream | 290401 | 34522254 ~ 34567625 (+) |
| LOC110489311 | LOC106570010 | coding | downstream | 657033 | 34888886 ~ 34894719 (+) |
| G2321274 | NA | non-coding | upstream | 56851 | 34147411 ~ 34149325 (+) |
| G2320420 | NA | non-coding | upstream | 196749 | 34009175 ~ 34009427 (+) |
| G2320419 | NA | non-coding | upstream | 197080 | 34008809 ~ 34009096 (+) |
| G2320418 | NA | non-coding | upstream | 197833 | 34008095 ~ 34008343 (+) |
| G2320412 | NA | non-coding | upstream | 205453 | 34000486 ~ 34000723 (+) |
| G2321327 | NA | non-coding | downstream | 17997 | 34249850 ~ 34250053 (+) |
| G2321330 | NA | non-coding | downstream | 21490 | 34253343 ~ 34253621 (+) |
| G2321333 | NA | non-coding | downstream | 24545 | 34256398 ~ 34306640 (+) |
| G2321347 | NA | non-coding | downstream | 58440 | 34290293 ~ 34345648 (+) |
| G2321351 | LOC106570163 | non-coding | downstream | 65238 | 34297091 ~ 34300833 (+) |
| G2320160 | NA | other | upstream | 754556 | 33451159 ~ 33451620 (+) |
| LOC110487593 | LOC106570137 | other | upstream | 1036059 | 33166851 ~ 33175323 (+) |
| G2319921 | NA | other | upstream | 1262784 | 32942203 ~ 32943392 (+) |
| G2318792 | NA | other | upstream | 2251663 | 31953622 ~ 31954513 (+) |
| LOC110488305 | LOC106569913 | other | upstream | 2264262 | 31934883 ~ 31988737 (+) |
| G2321378 | LOC106569991 | other | downstream | 105257 | 34337110 ~ 34354024 (+) |
| G2321656 | LOC105025880 | other | downstream | 617325 | 34849178 ~ 34850391 (+) |
| LOC110489302 | LOC106570022 | other | downstream | 738368 | 34969069 ~ 34972560 (+) |
| LOC110487604 | LOC106570016 | other | downstream | 1041286 | 35025996 ~ 35277684 (+) |
| LOC110489253 | LOC106597474 | other | downstream | 1209181 | 35441034 ~ 35521453 (+) |
