LOC110489288 (f131b)


Basic Information

Item Value
gene id LOC110489288
gene name f131b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 34374118 ~ 34395409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561986.2
agagagagagagagcgagtgagagacgtgcacaaacgcacacacacatacggagcgagacgggaggagagaagaggagtggagagaatgCCTGGTGAAAGGGTGGCGCTTCCTCGCTTGCTGCTTCCAAGGcctctgtgagagagagacaccatgggCTGCATCGGCTCCCGGACCATCACTTATATCTGTGTGGAGAAGAGGGCACGCAATGCAGTGTCAATTTACACAGCGGACGCTGTTCCCGTACGGAAAGATGGGGAGCAGCTCTCGATGGAGGACACTTCCTCCATCCTGCCTCGTCTGAAGAGGAACTCCAGCGCCTACGGGATCGGTGCCCTGGCTAAGTCCTCACTGACagGCGTGTCCCGTTCCATGAAGGATAAAGTGACAAAGCCCACTGCCATGGCCTCGGGCAAGGTGGCGCACATGATCGAATGGCAGAGCTGGAACACACCATCCACTGGGACTGAAGGGACTGTGGTCGCCAAAATCCCAACCTCGCAACGCGAAAAGGataggaggagggagagtgaaaTGTACAGCGAACTCAGTGAAGGAGAAAAGGAAGCCCGCTTCACCGCAGGATTAATGGCACAATTTGCCTTATCGGAGGCTACTCTTCTGGGCTGGAGATCTATGGAGGAAGACAGCCTTTGTGCTGGCTCCAACCAAGGCAGTGGGGCACACCTCAGTGAGACCAACCAGGAGAGCATCACCAGCAGAGATCAGGCGACGCATCACTCCTCGGCCGACGTGTGGCCCAACACCTACGTCGCCCAGGGCCTCTATTGCCTCTCCTCCTCCGACGCCTGGGAGCCAATCAGCAACGATCCATCGGGCGTGGCCTCGCCGGCCGCCTACATCATGGCGGGTGGGGGCGGAGGGACGCCCGGTGAGGGCTACGGCGAGCTGGACAGCGTGGGGGGCTACATCCAGCAGCCGTCCCAACAGCTCACCCTGCAGCAGCAGAGCCAGCTGCAGCTCCAGCAGCTGCAGCAGATCCAGCTGTACCAGCACCAGCAGCTAATGCTCTACCAACAGCAACAGACAATGGAACACAGACTACACAGTGCAAACCACTCCCTCCAAGCCACGCCCAACAGCACCATCCACAGTCTGGGCCTGCCCACTCACCCTCGCCTGGCTGACCTATGGGGATCCGCGCAGGTGGAGATTGTCGGACAGATGAGCGGGCCAATGGGTGACATGGTTGGGGGTGTGGTTGAGACCTTGGGGGAGGAGCCAGAGGAGGAGAGCGAATGCATTTCAGAgcaacaggaagaggaggagactaAGGAAGATGAGATTACGTTAACCTTGGAGCCAACTTTGACCCCGTCGCCGCTTAGAGAAGACGCCACCCCGATTGGAGGCACCAGTCCACAACTAGCACGCCCAGAATCAATGGGAGAGCGCATACCCTTTGTGGTCACGCCCTGCATAGTCCAATCGTTGGAGGAGAAGGATGAAGAGGTGGCGGAGGGGTCTATTGTTGCCGTGGCAATCAATTGAGAGggacagtcag
>XM_021561987.2
agagagagagagcgagtgagagacgtgcacaaacgcacacacacatacggagcgagacgggaggagagaagaggagtggagagaatgCCTGGTGAAAGGGTGGCGCTTCCTCGCTTGCTGCTTCCAAGGcctctgtgagagagagacaccatgggCTGCATCGGCTCCCGGACCATCACAGCGGACGCTGTTCCCGTACGGAAAGATGGGGAGCAGCTCTCGATGGAGGACACTTCCTCCATCCTGCCTCGTCTGAAGAGGAACTCCAGCGCCTACGGGATCGGTGCCCTGGCTAAGTCCTCACTGACaggtgtgtcagGCGTGTCCCGTTCCATGAAGGATAAAGTGACAAAGCCCACTGCCATGGCCTCGGGCAAGGTGGCGCACATGATCGAATGGCAGAGCTGGAACACACCATCCACTGGGACTGAAGGGACTGTGGTCGCCAAAATCCCAACCTCGCAACGCGAAAAGGataggaggagggagagtgaaaTGTACAGCGAACTCAGTGAAGGAGAAAAGGAAGCCCGCTTCACCGCAGGATTAATGGCACAATTTGCCTTATCGGAGGCTACTCTTCTGGGCTGGAGATCTATGGAGGAAGACAGCCTTTGTGCTGGCTCCAACCAAGGCAGTGGGGCACACCTCAGTGAGACCAACCAGGAGAGCATCACCAGCAGAGATCAGGCGACGCATCACTCCTCGGCCGACGTGTGGCCCAACACCTACGTCGCCCAGGGCCTCTATTGCCTCTCCTCCTCCGACGCCTGGGAGCCAATCAGCAACGATCCATCGGGCGTGGCCTCGCCGGCCGCCTACATCATGGCGGGTGGGGGCGGAGGGACGCCCGGTGAGGGCTACGGCGAGCTGGACAGCGTGGGGGGCTACATCCAGCAGCCGTCCCAACAGCTCACCCTGCAGCAGCAGAGCCAGCTGCAGCTCCAGCAGCTGCAGCAGATCCAGCTGTACCAGCACCAGCAGCTAATGCTCTACCAACAGCAACAGACAATGGAACACAGACTACACAGTGCAAACCACTCCCTCCAAGCCACGCCCAACAGCACCATCCACAGTCTGGGCCTGCCCACTCACCCTCGCCTGGCTGACCTATGGGGATCCGCGCAGGTGGAGATTGTCGGACAGATGAGCGGGCCAATGGGTGACATGGTTGGGGGTGTGGTTGAGACCTTGGGGGAGGAGCCAGAGGAGGAGAGCGAATGCATTTCAGAgcaacaggaagaggaggagactaAGGAAGATGAGATTACGTTAACCTTGGAGCCAACTTTGACCCCGTCGCCGCTTAGAGAAGACGCCACCCCGATTGGAGGCACCAGTCCACAACTAGCACGCCCAGAATCAATGGGAGAGCGCATACCCTTTGTGGTCACGCCCTGCATAGTCCAATCGTTGGAGGAGAAGGATGAAGAGGTGGCGGAGGGGTCTATTGTTGCCGTGGCAATCAATTGAGAGggacagtcag
>XM_021561984.2
gagagagagagcgagtgagagacgtgcacaaacgcacacacacatacggagcgagacgggaggagagaagaggagtggagagaatgCCTGGTGAAAGGGTGGCGCTTCCTCGCTTGCTGCTTCCAAGGcctctgtgagagagagacaccatgggCTGCATCGGCTCCCGGACCATCACTTATATCTGTGTGGAGAAGAGGGCACGCAATGCAGTGTCAATTTACACAGCGGACGCTGTTCCCGTACGGAAAGATGGGGAGCAGCTCTCGATGGAGGACACTTCCTCCATCCTGCCTCGTCTGAAGAGGAACTCCAGCGCCTACGGGATCGGTGCCCTGGCTAAGTCCTCACTGACaggtgtgtcagGCGTGTCCCGTTCCATGAAGGATAAAGTGACAAAGCCCACTGCCATGGCCTCGGGCAAGGTGGCGCACATGATCGAATGGCAGAGCTGGAACACACCATCCACTGGGACTGAAGGGACTGTGGTCGCCAAAATCCCAACCTCGCAACGCGAAAAGGataggaggagggagagtgaaaTGTACAGCGAACTCAGTGAAGGAGAAAAGGAAGCCCGCTTCACCGCAGGATTAATGGCACAATTTGCCTTATCGGAGGCTACTCTTCTGGGCTGGAGATCTATGGAGGAAGACAGCCTTTGTGCTGGCTCCAACCAAGGCAGTGGGGCACACCTCAGTGAGACCAACCAGGAGAGCATCACCAGCAGAGATCAGGCGACGCATCACTCCTCGGCCGACGTGTGGCCCAACACCTACGTCGCCCAGGGCCTCTATTGCCTCTCCTCCTCCGACGCCTGGGAGCCAATCAGCAACGATCCATCGGGCGTGGCCTCGCCGGCCGCCTACATCATGGCGGGTGGGGGCGGAGGGACGCCCGGTGAGGGCTACGGCGAGCTGGACAGCGTGGGGGGCTACATCCAGCAGCCGTCCCAACAGCTCACCCTGCAGCAGCAGAGCCAGCTGCAGCTCCAGCAGCTGCAGCAGATCCAGCTGTACCAGCACCAGCAGCTAATGCTCTACCAACAGCAACAGACAATGGAACACAGACTACACAGTGCAAACCACTCCCTCCAAGCCACGCCCAACAGCACCATCCACAGTCTGGGCCTGCCCACTCACCCTCGCCTGGCTGACCTATGGGGATCCGCGCAGGTGGAGATTGTCGGACAGATGAGCGGGCCAATGGGTGACATGGTTGGGGGTGTGGTTGAGACCTTGGGGGAGGAGCCAGAGGAGGAGAGCGAATGCATTTCAGAgcaacaggaagaggaggagactaAGGAAGATGAGATTACGTTAACCTTGGAGCCAACTTTGACCCCGTCGCCGCTTAGAGAAGACGCCACCCCGATTGGAGGCACCAGTCCACAACTAGCACGCCCAGAATCAATGGGAGAGCGCATACCCTTTGTGGTCACGCCCTGCATAGTCCAATCGTTGGAGGAGAAGGATGAAGAGGTGGCGGAGGGGTCTATTGTTGCCGTGGCAATCAATTGAGAGggacagtcagaaagagagatTGACAAACATGATACACTTATCAATAATCAACCAAGCAAGCTATTCCACACCCCTTCCAGCTATTTACCCACTCTGAGACTGAGAGAAAAACAAAGACCAAGTGCTGGAAATGACAATGATGAAAGAGCCACAGGCGACTTTAAAGACAGTTCATTGACTGCTCAAATCTGTGGGTTTGCTGAAACGTAAGGATTTGTTTTGCCGTGATATTGAACTGAGGAAAGGAAGTTGAAAGAATGGAGTTCAAGAGTAGAAAGAAAGACAAAGGACACTGCGATAAAGTTCAGTGCAATACAGAGAATCACGAGACAACCAAAAGGAAGTGCATGCTTTTGAAAGGAATCTAACGATAATAGTAAACCGTATACAaagtaataatatataataaggatttttataaaaacaaaaaaGGAAATAAAGTGATATGTatca
>XM_021561989.2
agagagcgagtgagagacgtgcacaaacgcacacacacatacggagcgagacgggaggagagaagaggagtggagagaatgCCTGGTGAAAGGGTGGCGCTTCCTCGCTTGCTGCTTCCAAGGcctctgtgagagagagacaccatgggCTGCATCGGCTCCCGGACCATCACTCTCGATGGAGGACACTTCCTCCATCCTGCCTCGTCTGAAGAGGAACTCCAGCGCCTACGGGATCGGTGCCCTGGCTAAGTCCTCACTGACagGCGTGTCCCGTTCCATGAAGGATAAAGTGACAAAGCCCACTGCCATGGCCTCGGGCAAGGTGGCGCACATGATCGAATGGCAGAGCTGGAACACACCATCCACTGGGACTGAAGGGACTGTGGTCGCCAAAATCCCAACCTCGCAACGCGAAAAGGataggaggagggagagtgaaaTGTACAGCGAACTCAGTGAAGGAGAAAAGGAAGCCCGCTTCACCGCAGGATTAATGGCACAATTTGCCTTATCGGAGGCTACTCTTCTGGGCTGGAGATCTATGGAGGAAGACAGCCTTTGTGCTGGCTCCAACCAAGGCAGTGGGGCACACCTCAGTGAGACCAACCAGGAGAGCATCACCAGCAGAGATCAGGCGACGCATCACTCCTCGGCCGACGTGTGGCCCAACACCTACGTCGCCCAGGGCCTCTATTGCCTCTCCTCCTCCGACGCCTGGGAGCCAATCAGCAACGATCCATCGGGCGTGGCCTCGCCGGCCGCCTACATCATGGCGGGTGGGGGCGGAGGGACGCCCGGTGAGGGCTACGGCGAGCTGGACAGCGTGGGGGGCTACATCCAGCAGCCGTCCCAACAGCTCACCCTGCAGCAGCAGAGCCAGCTGCAGCTCCAGCAGCTGCAGCAGATCCAGCTGTACCAGCACCAGCAGCTAATGCTCTACCAACAGCAACAGACAATGGAACACAGACTACACAGTGCAAACCACTCCCTCCAAGCCACGCCCAACAGCACCATCCACAGTCTGGGCCTGCCCACTCACCCTCGCCTGGCTGACCTATGGGGATCCGCGCAGGTGGAGATTGTCGGACAGATGAGCGGGCCAATGGGTGACATGGTTGGGGGTGTGGTTGAGACCTTGGGGGAGGAGCCAGAGGAGGAGAGCGAATGCATTTCAGAgcaacaggaagaggaggagactaAGGAAGATGAGATTACGTTAACCTTGGAGCCAACTTTGACCCCGTCGCCGCTTAGAGAAGACGCCACCCCGATTGGAGGCACCAGTCCACAACTAGCACGCCCAGAATCAATGGGAGAGCGCATACCCTTTGTGGTCACGCCCTGCATAGTCCAATCGTTGGAGGAGAAGGATGAAGAGGTGGCGGAGGGGTCTATTGTTGCCGTGGCAATCAATTGAGAGggacagtcag
>XM_021561988.2
agagcgagtgagagacgtgcacaaacgcacacacacatacggagcgagacgggaggagagaagaggagtggagagaatgCCTGGTGAAAGGGTGGCGCTTCCTCGCTTGCTGCTTCCAAGGcctctgtgagagagagacaccatgggCTGCATCGGCTCCCGGACCATCACTCTCGATGGAGGACACTTCCTCCATCCTGCCTCGTCTGAAGAGGAACTCCAGCGCCTACGGGATCGGTGCCCTGGCTAAGTCCTCACTGACaggtgtgtcagGCGTGTCCCGTTCCATGAAGGATAAAGTGACAAAGCCCACTGCCATGGCCTCGGGCAAGGTGGCGCACATGATCGAATGGCAGAGCTGGAACACACCATCCACTGGGACTGAAGGGACTGTGGTCGCCAAAATCCCAACCTCGCAACGCGAAAAGGataggaggagggagagtgaaaTGTACAGCGAACTCAGTGAAGGAGAAAAGGAAGCCCGCTTCACCGCAGGATTAATGGCACAATTTGCCTTATCGGAGGCTACTCTTCTGGGCTGGAGATCTATGGAGGAAGACAGCCTTTGTGCTGGCTCCAACCAAGGCAGTGGGGCACACCTCAGTGAGACCAACCAGGAGAGCATCACCAGCAGAGATCAGGCGACGCATCACTCCTCGGCCGACGTGTGGCCCAACACCTACGTCGCCCAGGGCCTCTATTGCCTCTCCTCCTCCGACGCCTGGGAGCCAATCAGCAACGATCCATCGGGCGTGGCCTCGCCGGCCGCCTACATCATGGCGGGTGGGGGCGGAGGGACGCCCGGTGAGGGCTACGGCGAGCTGGACAGCGTGGGGGGCTACATCCAGCAGCCGTCCCAACAGCTCACCCTGCAGCAGCAGAGCCAGCTGCAGCTCCAGCAGCTGCAGCAGATCCAGCTGTACCAGCACCAGCAGCTAATGCTCTACCAACAGCAACAGACAATGGAACACAGACTACACAGTGCAAACCACTCCCTCCAAGCCACGCCCAACAGCACCATCCACAGTCTGGGCCTGCCCACTCACCCTCGCCTGGCTGACCTATGGGGATCCGCGCAGGTGGAGATTGTCGGACAGATGAGCGGGCCAATGGGTGACATGGTTGGGGGTGTGGTTGAGACCTTGGGGGAGGAGCCAGAGGAGGAGAGCGAATGCATTTCAGAgcaacaggaagaggaggagactaAGGAAGATGAGATTACGTTAACCTTGGAGCCAACTTTGACCCCGTCGCCGCTTAGAGAAGACGCCACCCCGATTGGAGGCACCAGTCCACAACTAGCACGCCCAGAATCAATGGGAGAGCGCATACCCTTTGTGGTCACGCCCTGCATAGTCCAATCGTTGGAGGAGAAGGATGAAGAGGTGGCGGAGGGGTCTATTGTTGCCGTGGCAATCAATTGAGAGggacagtcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561986.2 False 1527 mRNA 0.58 9 34374118 34394966
XM_021561987.2 False 1486 mRNA 0.59 8 34374120 34394966
XM_021561984.2 False 1976 mRNA 0.53 9 34374121 34395409
XM_021561989.2 False 1433 mRNA 0.59 7 34374126 34394966
XM_021561988.2 True 1440 mRNA 0.59 7 34374128 34394966

Neighbor

gene id symbol gene type direction distance location
LOC110489266 LOC106569989 coding upstream 87872 34273307 ~ 34286246 (+)
LOC110487599 LOC106569987 coding upstream 142265 34206176 ~ 34231853 (+)
LOC110488377 LOC105025850 coding upstream 180462 34171145 ~ 34193656 (+)
LOC110488374 LOC106569985 coding upstream 228676 34135781 ~ 34145442 (+)
LOC110488373 LOC106570161 coding upstream 242132 34126252 ~ 34131986 (+)
LOC110489290 LOC106569995 coding downstream 48743 34444152 ~ 34462496 (+)
LOC110489308 LOC106570000 coding downstream 126845 34522254 ~ 34567625 (+)
LOC110489311 LOC106570010 coding downstream 493477 34888886 ~ 34894719 (+)
LOC110489298 LOC106570012 coding downstream 542686 34938095 ~ 34941903 (+)
LOC110489330 LOC104962755 coding downstream 565328 34960737 ~ 34966594 (+)
G2321397 NA non-coding upstream 119 34373739 ~ 34373999 (+)
G2321378 LOC106569991 non-coding upstream 20094 34337110 ~ 34354024 (+)
G2321347 NA non-coding upstream 28470 34290293 ~ 34345648 (+)
G2321372 NA non-coding upstream 45378 34328375 ~ 34328740 (+)
G2321333 NA non-coding upstream 67478 34256398 ~ 34306640 (+)
G2321396 NA non-coding downstream 1066 34396475 ~ 34397141 (+)
G2321440 NA non-coding downstream 58400 34453809 ~ 34467124 (+)
G2321520 NA non-coding downstream 187758 34583167 ~ 34583397 (+)
G2321552 NA non-coding downstream 245565 34640974 ~ 34641243 (+)
G2321559 NA non-coding downstream 251034 34646443 ~ 34649465 (+)
G2320160 NA other upstream 922498 33451159 ~ 33451620 (+)
LOC110487593 LOC106570137 other upstream 1204001 33166851 ~ 33175323 (+)
G2319921 NA other upstream 1430726 32942203 ~ 32943392 (+)
G2318792 NA other upstream 2419605 31953622 ~ 31954513 (+)
G2321656 LOC105025880 other downstream 453769 34849178 ~ 34850391 (+)
LOC110489302 LOC106570022 other downstream 574812 34969069 ~ 34972560 (+)
LOC110487604 LOC106570016 other downstream 877730 35025996 ~ 35277684 (+)
LOC110489253 LOC106597474 other downstream 1045625 35441034 ~ 35521453 (+)
G2321738 LOC106597474 other downstream 1095722 35491131 ~ 35498127 (+)

Expression


Co-expression Network