LOC118946548


Basic Information

Item Value
gene id LOC118946548
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 35807694 ~ 35807777 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005041419.1
TACAAGTGATGTTGTTCTCACAATGGTCTTCCAAGCCTTCATGGCTTTGAAGAAATTGCCTAAAGGCAACACTGATGCAGTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005041419.1 True 84 mRNA 0.42 1 35807694 35807777

Neighbor

gene id symbol gene type direction distance location
LOC110489281 LOC106570035 coding upstream 92115 35703914 ~ 35715579 (+)
ncdn ncdn coding upstream 104734 35693269 ~ 35702960 (+)
LOC110489299 LOC106570032 coding upstream 163906 35638212 ~ 35643788 (+)
LOC110489268 LOC106570027 coding upstream 239303 35558560 ~ 35568391 (+)
LOC110489253 LOC106597474 coding upstream 286241 35441034 ~ 35521453 (+)
LOC110489318 LOC106570172 coding downstream 8031 35815808 ~ 35818696 (+)
LOC110489309 LOC106570039 coding downstream 14958 35822735 ~ 35836770 (+)
LOC110488378 NA coding downstream 280331 36088108 ~ 36092710 (+)
LOC110511601 LOC106570043 coding downstream 477950 36285727 ~ 36298893 (+)
LOC110488383 LOC106570042 coding downstream 509294 36317071 ~ 36397386 (+)
G2322988 NA non-coding upstream 2116 35802733 ~ 35805578 (+)
G2322985 NA non-coding upstream 30529 35776892 ~ 35777165 (+)
G2322954 NA non-coding upstream 52972 35752887 ~ 35754722 (+)
G2322045 psmb2 non-coding upstream 80304 35716797 ~ 35727390 (+)
G2322078 NA non-coding upstream 118023 35689465 ~ 35689671 (+)
G2323018 NA non-coding downstream 45589 35853366 ~ 35853581 (+)
G2323020 NA non-coding downstream 49439 35857216 ~ 35857642 (+)
G2323021 NA non-coding downstream 50982 35858759 ~ 35858977 (+)
G2323024 LOC106570040 non-coding downstream 61186 35868963 ~ 35869184 (+)
G2321721 LOC106588478 other upstream 212781 35586587 ~ 35594913 (+)
G2321738 LOC106597474 other upstream 309567 35491131 ~ 35498127 (+)
LOC110487604 LOC106570016 other upstream 530031 35025996 ~ 35277684 (+)
LOC110489302 LOC106570022 other upstream 837068 34969069 ~ 34972560 (+)
G2323520 NA other downstream 520627 36328404 ~ 36408978 (+)
G2323704 NA other downstream 840036 36647813 ~ 36648422 (+)
LOC110488401 LOC106570049 other downstream 1131305 36939068 ~ 37071496 (+)
G2324003 NA other downstream 1244288 37052065 ~ 37062067 (+)

Expression


Co-expression Network