LOC110487616 (LOC106570045)


Basic Information

Item Value
gene id LOC110487616
gene name LOC106570045
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 36583439 ~ 36584376 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110487616
ATGGAAGCTCAAGCGTATAGAGTCAGGACTCTGGGAGAATGGGAACAAGgttggaaagagggagagattggCTCTCATTCTCAAGGAATTACAGACATGTTGGAGAGCTATATTGACAAGGTTCTCTGTGAACTGAAGGGAGTCCGGTTTTTCTTCCCACTATGTGGGAAAGCCGTTGATATGAAATGGCTTGTAGATATGGGACACCCAGTTGTTGGTGTGGATATAGCTGAGATGGGTATTAGGCAGTTCTTTGAAGATCAGAAGTTGATCTACAGTGAAGAAGTGGTCCCAGCAATACCTGGTGCCAAGGTTTACAAGGGTTCAGATGGAAAGCTATCCTTGTACCGGTGTGACCAATGCAAATTCTCCAGGTAAAGATCATTTGAACAGTAATCCATTTCCCCGCATTTCTTAAATTGTTTTGACACAAGTTACGTCTGTAACAGGTATGCAGCACTGATCATGTCGTCCGTGGACAAGGACTGACGATACCTCttggacaattttttttatttttattcttaA

Function

NR:

description
thiopurine S-methyltransferase isoform X2

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110487616 True 528 mRNA 0.43 5 36583439 36584376

Neighbor

gene id symbol gene type direction distance location
LOC110489313 tpmt coding upstream 2510 36577774 ~ 36580929 (+)
LOC110488383 LOC106570042 coding upstream 186053 36317071 ~ 36397386 (+)
LOC110511601 LOC106570043 coding upstream 284546 36285727 ~ 36298893 (+)
LOC110488378 NA coding upstream 491379 36088108 ~ 36092710 (+)
LOC110489309 LOC106570039 coding upstream 746669 35822735 ~ 35836770 (+)
LOC110489338 NA coding downstream 993 36585369 ~ 36591508 (+)
LOC110487617 LOC106570046 coding downstream 17611 36601987 ~ 36636845 (+)
LOC110487626 LOC106570047 coding downstream 243965 36828341 ~ 36888157 (+)
LOC110487625 LOC106570048 coding downstream 330669 36915045 ~ 36930817 (+)
LOC110488401 LOC106570049 coding downstream 354692 36939068 ~ 37071496 (+)
G2323637 NA non-coding upstream 9223 36537911 ~ 36574216 (+)
G2323572 NA non-coding upstream 161197 36418526 ~ 36422242 (+)
G2323565 NA non-coding upstream 172368 36410781 ~ 36411071 (+)
G2323563 NA non-coding upstream 176288 36403563 ~ 36407151 (+)
G2323497 NA non-coding upstream 283400 36299818 ~ 36300039 (+)
G2323703 NA non-coding downstream 62243 36646619 ~ 36646933 (+)
G2323705 NA non-coding downstream 64265 36648641 ~ 36648999 (+)
G2323708 NA non-coding downstream 69142 36653518 ~ 36653909 (+)
G2323710 NA non-coding downstream 71517 36655893 ~ 36656177 (+)
G2323520 NA other upstream 174461 36328404 ~ 36408978 (+)
G2321721 LOC106588478 other upstream 988526 35586587 ~ 35594913 (+)
LOC110489253 LOC106597474 other upstream 1072814 35441034 ~ 35521453 (+)
G2323704 NA other downstream 63437 36647813 ~ 36648422 (+)
G2324003 NA other downstream 467689 37052065 ~ 37062067 (+)
G2324095 NA other downstream 637503 37221879 ~ 37223573 (+)
G2324390 NA other downstream 1206684 37791060 ~ 37792175 (+)

Expression


Co-expression Network