Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489277 |
| gene name | LOC106588509 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_050572.1 |
| NCBI id | CM025859.1 |
| chromosome length | 41837469 |
| location | 37304770 ~ 37321891 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| double-strand-break repair protein rad21 homolog |
| id | name | namespace |
|---|---|---|
| GO:0000228 | nuclear chromosome | cellular_component |
| id | description |
|---|---|
| K06670 | SCC1, MCD1, RAD21; cohesin complex subunit SCC1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036970760.1 | True | 4066 | mRNA | 0.47 | 14 | 37304770 | 37321891 |
37,286,000
37,288,000
37,290,000
37,292,000
37,294,000
37,296,000
37,298,000
37,300,000
37,302,000
37,304,000
37,304,000
37,306,000
37,308,000
37,310,000
37,312,000
37,314,000
37,316,000
37,318,000
37,320,000
37,322,000
NC_050572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487634 | LOC106570050 | coding | upstream | 108995 | 37099833 ~ 37195775 (+) |
| LOC110488401 | LOC106570049 | coding | upstream | 235667 | 36939068 ~ 37071496 (+) |
| LOC110487625 | LOC106570048 | coding | upstream | 373953 | 36915045 ~ 36930817 (+) |
| LOC110487626 | LOC106570047 | coding | upstream | 416613 | 36828341 ~ 36888157 (+) |
| LOC110487617 | LOC106570046 | coding | upstream | 667925 | 36601987 ~ 36636845 (+) |
| LOC110487637 | LOC100380769 | coding | downstream | 11382 | 37333273 ~ 37357535 (+) |
| LOC110488517 | LOC106570054 | coding | downstream | 39197 | 37361088 ~ 37386233 (+) |
| LOC110489276 | LOC106570057 | coding | downstream | 83536 | 37405427 ~ 37421184 (+) |
| LOC110515118 | LOC106570056 | coding | downstream | 102851 | 37424742 ~ 37463299 (+) |
| LOC110489316 | LOC106570058 | coding | downstream | 141860 | 37463751 ~ 37476003 (+) |
| G2324128 | NA | non-coding | upstream | 23366 | 37271521 ~ 37281404 (+) |
| G2324030 | NA | non-coding | upstream | 44649 | 37201361 ~ 37260121 (+) |
| G2324113 | NA | non-coding | upstream | 56912 | 37245983 ~ 37247858 (+) |
| G2324031 | NA | non-coding | upstream | 89400 | 37197246 ~ 37215370 (+) |
| G2324027 | NA | non-coding | upstream | 105640 | 37198288 ~ 37199130 (+) |
| G2324177 | NA | non-coding | downstream | 2720 | 37324611 ~ 37324956 (+) |
| G2324179 | NA | non-coding | downstream | 4122 | 37326013 ~ 37326262 (+) |
| G2324180 | NA | non-coding | downstream | 6344 | 37328235 ~ 37328439 (+) |
| G2324205 | NA | non-coding | downstream | 75217 | 37397108 ~ 37397404 (+) |
| G2324207 | NA | non-coding | downstream | 76847 | 37398738 ~ 37398988 (+) |
| G2324095 | NA | other | upstream | 81197 | 37221879 ~ 37223573 (+) |
| G2324003 | NA | other | upstream | 242703 | 37052065 ~ 37062067 (+) |
| G2323704 | NA | other | upstream | 656348 | 36647813 ~ 36648422 (+) |
| G2323520 | NA | other | upstream | 895792 | 36328404 ~ 36408978 (+) |
| G2324390 | NA | other | downstream | 469169 | 37791060 ~ 37792175 (+) |
| G2324356 | NA | other | downstream | 484552 | 37806443 ~ 37818942 (+) |
| LOC110513167 | LOC106588196 | other | downstream | 1379461 | 38656536 ~ 38730779 (+) |
| G2326978 | NA | other | downstream | 1853603 | 39175494 ~ 39179180 (+) |
| rps27.1 | LOC106605923 | other | downstream | 2074820 | 39396631 ~ 39398852 (+) |
