G2287268


Basic Information

Item Value
gene id G2287268
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 264235 ~ 264879 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615385
ACCTCTCCTCAGAGTCCCTGATGTAAGTGTTGATGAGCATGCCGTACATCTCAGAATGGATGTTCTCTATGAGGATCTGGAACCCATAGAAGGATCGGGCCTCTGGAAGCTGTACCTCCTGACTAAACCTCTGGACCTGAGGGATGGATAACGTTGGGtcagcagcgtagcctagtggttagagcgttggactagtaaccaaaaggttgcaagatcaaggtaaaaatctgtcgttctgcccctgaacaggcagttaacccactgttcctaggccgtcattgaaaataagaatgtgttcttaactgacttgccgagttaaataaaggtaaaaaaggaTGAAGGATGAATAGGCTGGGGtgagaatacagtataatacagaataatacagtactactgtatAGCTACATCAACAACAAATAGGCTGGGGTGAGAACACAGTataatacagtactactgtatAGCTACATCAACAACAAATAGGCTGGGGTGAGaacacagtataatacagtataatacag

Function

NR:

description
ribonucleoside-diphosphate reductase subunit M2 B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615385 True 518 lncRNA 0.43 2 264235 264879

Neighbor

gene id symbol gene type direction distance location
rpl30 LOC106589133 coding upstream 24667 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 58718 175807 ~ 205517 (+)
stk3 stk3 coding upstream 89808 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 130842 79928 ~ 134719 (+)
LOC118946552 NA coding upstream 212088 52015 ~ 52147 (+)
spire1a LOC106589129 coding downstream 52024 316903 ~ 349528 (+)
psmg2 psmg2 coding downstream 211353 476232 ~ 482157 (+)
seh1l seh1l coding downstream 300245 565124 ~ 587159 (+)
rnmt rnmt coding downstream 331883 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 473742 738621 ~ 899937 (+)
G2287250 NA non-coding upstream 3595 217573 ~ 260640 (+)
G2287265 NA non-coding upstream 5092 256557 ~ 259143 (+)
G2287248 NA non-coding upstream 47775 215463 ~ 216460 (+)
G2287233 NA non-coding upstream 60632 202807 ~ 203603 (+)
G2287230 NA non-coding upstream 83982 177949 ~ 180253 (+)
G2287269 NA non-coding downstream 687 265566 ~ 283496 (+)
G2287245 NA non-coding downstream 8502 273381 ~ 290978 (+)
G2287280 NA non-coding downstream 38660 303539 ~ 304001 (+)
G2287242 NA non-coding downstream 45039 309918 ~ 310293 (+)
G2287241 NA non-coding downstream 45773 310652 ~ 311552 (+)
G2287470 NA other downstream 221914 486793 ~ 487661 (+)
G2287973 NA other downstream 1008495 1273374 ~ 1274170 (+)
triqk triqk other downstream 1944243 2209019 ~ 2255119 (+)
G2288669 NA other downstream 2056995 2321874 ~ 2324182 (+)
G2288814 NA other downstream 2115568 2380447 ~ 2381395 (+)

Expression


Co-expression Network