G2287269


Basic Information

Item Value
gene id G2287269
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 265566 ~ 283496 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615386
CCACTGTCCAGAAGGAGGCCTGGGCCTGTTTGTACATCCTCCAGATGTCAGGGTACTGGATTGGGAAGATGACAAAACGCCTGGGGTTGTCTCTAAGCAAGGGCTCATCCTCTGTGCAGCGCTGCTGGTCTGTGTCTTTGTGGCTGTTCTCAAAAAAAAAGATGGGGAGGGGACACGGGGGAAATCAGGCCTGAGAAGTAGATATTGAACACTTACAGGATGTCTATGGACATAAACGTCTCacgtgtgagttccaaatattCAGCTGGTCTCCCCCCCAGATGGAGtggtcagaatgcactcactgcgcCAACATGTGATTGTTacacaacaggacagttaacctgcCCTCCAACCAAGGCACGCTGCCTGCTAACTATCTGTATGTGGTCCTTCCTACCTTCTGTATGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTATGAACGCTGCATTCTACCTTCTGTATGAACGCTGCATTCTACCTTCTGTATGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTATGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTATGAACGCTGCATTCTACCTTCTGTATGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTCTGAACGCTGCATTCTACCTTCTGTATGAACGCTGCATTCTACCTTCTGTATGAACGCTGCATTCTACC

Function

NR:

description
GATA zinc finger domain-containing protein 14-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615386 True 976 lncRNA 0.48 2 265566 283496

Neighbor

gene id symbol gene type direction distance location
rpl30 LOC106589133 coding upstream 25998 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 60049 175807 ~ 205517 (+)
stk3 stk3 coding upstream 91139 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 132173 79928 ~ 134719 (+)
LOC118946552 NA coding upstream 213419 52015 ~ 52147 (+)
spire1a LOC106589129 coding downstream 33407 316903 ~ 349528 (+)
psmg2 psmg2 coding downstream 192736 476232 ~ 482157 (+)
seh1l seh1l coding downstream 281628 565124 ~ 587159 (+)
rnmt rnmt coding downstream 313266 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 455125 738621 ~ 899937 (+)
G2287268 NA non-coding upstream 687 264235 ~ 264879 (+)
G2287250 NA non-coding upstream 4926 217573 ~ 260640 (+)
G2287265 NA non-coding upstream 6423 256557 ~ 259143 (+)
G2287248 NA non-coding upstream 49106 215463 ~ 216460 (+)
G2287233 NA non-coding upstream 61963 202807 ~ 203603 (+)
G2287280 NA non-coding downstream 20043 303539 ~ 304001 (+)
G2287242 NA non-coding downstream 26422 309918 ~ 310293 (+)
G2287241 NA non-coding downstream 27156 310652 ~ 311552 (+)
G2287282 NA non-coding downstream 30939 314435 ~ 314634 (+)
G2287437 NA non-coding downstream 111565 395061 ~ 402253 (+)
G2287470 NA other downstream 203297 486793 ~ 487661 (+)
G2287973 NA other downstream 989878 1273374 ~ 1274170 (+)
triqk triqk other downstream 1925626 2209019 ~ 2255119 (+)
G2288669 NA other downstream 2038378 2321874 ~ 2324182 (+)
G2288814 NA other downstream 2096951 2380447 ~ 2381395 (+)

Expression


Co-expression Network