G2287245


Basic Information

Item Value
gene id G2287245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 273381 ~ 290978 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615353
aaaaacccttgaatgagtaggtgtttaaAACTTTGCTACTGTGTGTCAAATATAAAACATCCCCAAAATGCTTATTTCGCTCAAATGttatgcacaaatgtgtttacatccctgttagtgagcatttctctttgccaagataatccatccacctgacagttgtggaatatcaataaactgattaaacagcatgatcattacacaggtgcaccttgtgctggggataatacaaggccactaaaatgtgcagttttatcacaacacaatgccacagatgtctcaagttgagggagtgtgcaattggcatgctgactgcaggaatgtccaccagagcttttgcatgttaatttctctaccgtagGCTGCCTCCAACATTtgagaaaatttggcagtacgtcgaaccggcctcaaccgcagaccatgtgtaactacgccagtccaggacctccacatctggcttcttcaccggcAGGAtcatgagaccagccacctgacaaaactgaggagtatttgtcTGTAATATAGCTcttgtggggaaaaaaacaatcattctgattagctgggcctgtgcccctgcccagtaatGTGAATTCCATAGATtcgggcctaatgaatttatttcaattgactgatttccctatatgaactcagtaaaatctttcaaattgttgcattttgttatatatatatatatatacacacacacacacacacagggtggttCCTCCCtccatatatgcacacacacacaccctctctagcacttgtctgtctgtgtatatacacacacacaca

Function

NR:

description
hypothetical protein EH28_06569

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615353 True 795 lncRNA 0.42 2 273381 290978

Neighbor

gene id symbol gene type direction distance location
rpl30 LOC106589133 coding upstream 33813 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 67864 175807 ~ 205517 (+)
stk3 stk3 coding upstream 98954 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 139988 79928 ~ 134719 (+)
LOC118946552 NA coding upstream 221234 52015 ~ 52147 (+)
spire1a LOC106589129 coding downstream 25925 316903 ~ 349528 (+)
psmg2 psmg2 coding downstream 185254 476232 ~ 482157 (+)
seh1l seh1l coding downstream 274146 565124 ~ 587159 (+)
rnmt rnmt coding downstream 305784 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 447643 738621 ~ 899937 (+)
G2287268 NA non-coding upstream 8502 264235 ~ 264879 (+)
G2287250 NA non-coding upstream 12741 217573 ~ 260640 (+)
G2287265 NA non-coding upstream 14238 256557 ~ 259143 (+)
G2287248 NA non-coding upstream 56921 215463 ~ 216460 (+)
G2287233 NA non-coding upstream 69778 202807 ~ 203603 (+)
G2287280 NA non-coding downstream 12561 303539 ~ 304001 (+)
G2287242 NA non-coding downstream 18940 309918 ~ 310293 (+)
G2287241 NA non-coding downstream 19674 310652 ~ 311552 (+)
G2287282 NA non-coding downstream 23457 314435 ~ 314634 (+)
G2287437 NA non-coding downstream 104083 395061 ~ 402253 (+)
G2287470 NA other downstream 195815 486793 ~ 487661 (+)
G2287973 NA other downstream 982396 1273374 ~ 1274170 (+)
triqk triqk other downstream 1918144 2209019 ~ 2255119 (+)
G2288669 NA other downstream 2030896 2321874 ~ 2324182 (+)
G2288814 NA other downstream 2089469 2380447 ~ 2381395 (+)

Expression


Co-expression Network