G2287439


Basic Information

Item Value
gene id G2287439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 397187 ~ 401790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615603
actgaggagtcggtagtggtcccgtcggtagtactgaggacgaggagtcggtagtggtcccgtctgtagtactgaggagtcggtagtggtcccgtctgtagtactgaggagtcggtagtggtcctgtctgtagtactgaggagtcggtagtggtcctgtcggtagtactgaggaggaggaggagtcggtagtggtcctgtcggtagtactgaggagtcggtagtggtcctgtcggtagtactgaggagtcggtagtggtcctgtcggtaatactgaggaggaggagtcggtagtggtcctgtcggtagtactgaggagtcggtagtggtcctgtcggtaatactgaggaggaggagtcggtagtggtcctgtcggtagtactgaggaggaggagtcggtagtggtcccgtctgtagtactgaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615603 True 426 lncRNA 0.57 2 397187 401790

Neighbor

gene id symbol gene type direction distance location
spire1a LOC106589129 coding upstream 47659 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 157619 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 191670 175807 ~ 205517 (+)
stk3 stk3 coding upstream 222760 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 263794 79928 ~ 134719 (+)
psmg2 psmg2 coding downstream 74442 476232 ~ 482157 (+)
seh1l seh1l coding downstream 163334 565124 ~ 587159 (+)
rnmt rnmt coding downstream 194972 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 336831 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 534532 936322 ~ 962116 (+)
G2287282 NA non-coding upstream 82553 314435 ~ 314634 (+)
G2287241 NA non-coding upstream 85635 310652 ~ 311552 (+)
G2287242 NA non-coding upstream 86894 309918 ~ 310293 (+)
G2287280 NA non-coding upstream 93186 303539 ~ 304001 (+)
G2287245 NA non-coding upstream 106209 273381 ~ 290978 (+)
G2287445 NA non-coding downstream 553 402343 ~ 403679 (+)
G2287448 NA non-coding downstream 34958 436748 ~ 437227 (+)
G2287449 NA non-coding downstream 37316 439106 ~ 463255 (+)
G2287451 NA non-coding downstream 61672 463462 ~ 463663 (+)
G2287453 NA non-coding downstream 66356 468146 ~ 468587 (+)
G2287470 NA other downstream 85003 486793 ~ 487661 (+)
G2287973 NA other downstream 871584 1273374 ~ 1274170 (+)
triqk triqk other downstream 1807332 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1920084 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1978657 2380447 ~ 2381395 (+)

Expression


Co-expression Network