G2287448


Basic Information

Item Value
gene id G2287448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 436748 ~ 437227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615613
cccttggtcagagatgaagattcaggtaaggaacctattagacaccctaggtcagagaagaagattcaggtctggaacccataagacagcctaggtctggaacccataagacatcctaggtcagagaggaagattcaggtctggatcccataagacaccctaggtcagagaggaagattcaggtctggaacccataagacaccctaggtcagagagggagattcaggtctggaacccataagacaccctaggtcagagatgaagattcagctctggaacccataagacaccctaggtcagagatggagattcaggtctggatcccataagacaccgtatgtcagagagggagattcaggtctggaacacataagacacccttggtcagagatgaagattcaggtaaggaacctattagacaccctaggtcagagaagaagattcaggtctggaacccataagacagcctaggtctggaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615613 True 480 lncRNA 0.48 1 436748 437227

Neighbor

gene id symbol gene type direction distance location
spire1a LOC106589129 coding upstream 87220 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 197180 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 231231 175807 ~ 205517 (+)
stk3 stk3 coding upstream 262321 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 303355 79928 ~ 134719 (+)
psmg2 psmg2 coding downstream 39005 476232 ~ 482157 (+)
seh1l seh1l coding downstream 127897 565124 ~ 587159 (+)
rnmt rnmt coding downstream 159535 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 301394 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 499095 936322 ~ 962116 (+)
G2287445 NA non-coding upstream 33069 402343 ~ 403679 (+)
G2287437 NA non-coding upstream 34495 395061 ~ 402253 (+)
G2287439 NA non-coding upstream 34958 397187 ~ 401790 (+)
G2287282 NA non-coding upstream 122114 314435 ~ 314634 (+)
G2287241 NA non-coding upstream 125196 310652 ~ 311552 (+)
G2287449 NA non-coding downstream 1879 439106 ~ 463255 (+)
G2287451 NA non-coding downstream 26235 463462 ~ 463663 (+)
G2287453 NA non-coding downstream 30919 468146 ~ 468587 (+)
G2287456 NA non-coding downstream 34095 471322 ~ 471635 (+)
G2287464 NA non-coding downstream 45333 482560 ~ 482891 (+)
G2287470 NA other downstream 49566 486793 ~ 487661 (+)
G2287973 NA other downstream 836147 1273374 ~ 1274170 (+)
triqk triqk other downstream 1771895 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1884647 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1943220 2380447 ~ 2381395 (+)

Expression


Co-expression Network