G2287449


Basic Information

Item Value
gene id G2287449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 439106 ~ 463255 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615615
ctattagacaccctaggtctggaacccataagacaccctaggtctggaaccaatAAGACactctaggtctggaacccataagacaccataggtcagagagggagattcaggtctggaacccataagacaccctaggtcagagaagaagattcaggtctggaacccataagacacccatggtcagagaagaaggttcaggtctggaacctattagacaccctaggtctgtaacccataagacaccctaggtcagagatgaagattcaggtctggaacctattagacaccctaggtcagagatggagattcaggtctggatcccataagacaccctaggtcagagatgaagattcacgtctggaacccataagacaccctaggtctggaacccataagacaccctaggtctggaacccataagacaccctaggtcagagagggagattcaggtctggaacccataagacaccctaggtcagagatgaagattcagctctggaacccataagacaccctaggtcagagatggatattcaggtctggatcccataagacaccctatgtcagagagggagattcaggtctggaacccataagacacccttggtcagagatgaagattcaggtctggatcccataagacagcctaggtctggaacccataagacaccctaggtcagagaggaagattcaggtctggatcccataagacaccctaggtcagagaggaagattcaggtctggaacccataagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615615 True 756 lncRNA 0.49 3 439106 463255

Neighbor

gene id symbol gene type direction distance location
spire1a LOC106589129 coding upstream 89578 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 199538 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 233589 175807 ~ 205517 (+)
stk3 stk3 coding upstream 264679 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 305713 79928 ~ 134719 (+)
psmg2 psmg2 coding downstream 12977 476232 ~ 482157 (+)
seh1l seh1l coding downstream 101869 565124 ~ 587159 (+)
rnmt rnmt coding downstream 133507 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 275366 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 473067 936322 ~ 962116 (+)
G2287448 NA non-coding upstream 1879 436748 ~ 437227 (+)
G2287445 NA non-coding upstream 35427 402343 ~ 403679 (+)
G2287437 NA non-coding upstream 36853 395061 ~ 402253 (+)
G2287439 NA non-coding upstream 37316 397187 ~ 401790 (+)
G2287282 NA non-coding upstream 124472 314435 ~ 314634 (+)
G2287451 NA non-coding downstream 207 463462 ~ 463663 (+)
G2287453 NA non-coding downstream 4891 468146 ~ 468587 (+)
G2287456 NA non-coding downstream 8067 471322 ~ 471635 (+)
G2287464 NA non-coding downstream 19305 482560 ~ 482891 (+)
G2287466 NA non-coding downstream 19928 483183 ~ 483457 (+)
G2287470 NA other downstream 23538 486793 ~ 487661 (+)
G2287973 NA other downstream 810119 1273374 ~ 1274170 (+)
triqk triqk other downstream 1745867 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1858619 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1917192 2380447 ~ 2381395 (+)

Expression


Co-expression Network