G2287451


Basic Information

Item Value
gene id G2287451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 463462 ~ 463663 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615617
caccctaggtcagagagggagattcaggtctggaacccataagacaccctaggtcagagaagaagattcaggtctggaacccataagacaccctaggtctggaacccataagacaccctaggtcagagagggagattcaggtctggaacccataagacaccctaggtaagagatgaagattcagctctggaacccataagac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615617 True 202 lncRNA 0.50 1 463462 463663

Neighbor

gene id symbol gene type direction distance location
spire1a LOC106589129 coding upstream 113934 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 223894 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 257945 175807 ~ 205517 (+)
stk3 stk3 coding upstream 289035 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 330069 79928 ~ 134719 (+)
psmg2 psmg2 coding downstream 12569 476232 ~ 482157 (+)
seh1l seh1l coding downstream 101461 565124 ~ 587159 (+)
rnmt rnmt coding downstream 133099 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 274958 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 472659 936322 ~ 962116 (+)
G2287449 NA non-coding upstream 207 439106 ~ 463255 (+)
G2287448 NA non-coding upstream 26235 436748 ~ 437227 (+)
G2287445 NA non-coding upstream 59783 402343 ~ 403679 (+)
G2287437 NA non-coding upstream 61209 395061 ~ 402253 (+)
G2287439 NA non-coding upstream 61672 397187 ~ 401790 (+)
G2287453 NA non-coding downstream 4483 468146 ~ 468587 (+)
G2287456 NA non-coding downstream 7659 471322 ~ 471635 (+)
G2287464 NA non-coding downstream 18897 482560 ~ 482891 (+)
G2287466 NA non-coding downstream 19520 483183 ~ 483457 (+)
G2287469 NA non-coding downstream 21733 485396 ~ 486605 (+)
G2287470 NA other downstream 23130 486793 ~ 487661 (+)
G2287973 NA other downstream 809711 1273374 ~ 1274170 (+)
triqk triqk other downstream 1745459 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1858211 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1916784 2380447 ~ 2381395 (+)

Expression


Co-expression Network