G2287456


Basic Information

Item Value
gene id G2287456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 471322 ~ 471635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615622
CCTTAGGTatcttgatgatatttttggacTGTGGGGAGGCTCCACCTCTGAATTCAGGGAATTATTAAACATTTTAAACTCGCATCACTTATCAATATCAATTACACATAACTTGCACAAAAGTATTTCTAGGTACACATGTCCTTTTTCATTCACAAGGAGGGAGAAACCAAAAAATGTGCAACTACAGTTTTCTTTAAGTAAACAGAAACCTCCTTCACAAATGTAGTTTCcatccaaaacacacacaaaatggtGAGGGTCCTGATCAAATCACAATTTATACGTTTCCACAGAATCTGTTGTTATAGAGG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615622 True 314 lncRNA 0.36 1 471322 471635

Neighbor

gene id symbol gene type direction distance location
spire1a LOC106589129 coding upstream 121794 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 231754 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 265805 175807 ~ 205517 (+)
stk3 stk3 coding upstream 296895 154976 ~ 174427 (+)
rnf19a LOC106570787 coding upstream 337929 79928 ~ 134719 (+)
psmg2 psmg2 coding downstream 4597 476232 ~ 482157 (+)
seh1l seh1l coding downstream 93489 565124 ~ 587159 (+)
rnmt rnmt coding downstream 125127 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 266986 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 464687 936322 ~ 962116 (+)
G2287453 NA non-coding upstream 2735 468146 ~ 468587 (+)
G2287451 NA non-coding upstream 7659 463462 ~ 463663 (+)
G2287449 NA non-coding upstream 8067 439106 ~ 463255 (+)
G2287448 NA non-coding upstream 34095 436748 ~ 437227 (+)
G2287445 NA non-coding upstream 67643 402343 ~ 403679 (+)
G2287464 NA non-coding downstream 10925 482560 ~ 482891 (+)
G2287466 NA non-coding downstream 11548 483183 ~ 483457 (+)
G2287469 NA non-coding downstream 13761 485396 ~ 486605 (+)
G2287473 NA non-coding downstream 27759 499394 ~ 549250 (+)
G2287482 NA non-coding downstream 86270 557905 ~ 575122 (+)
G2287470 NA other downstream 15158 486793 ~ 487661 (+)
G2287973 NA other downstream 801739 1273374 ~ 1274170 (+)
triqk triqk other downstream 1737487 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1850239 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1908812 2380447 ~ 2381395 (+)

Expression


Co-expression Network