G2287464


Basic Information

Item Value
gene id G2287464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 482560 ~ 482891 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615630
cacggactttcaactccctccaaagattttctatggggttgagatctggagactggctaggccactccaggaccttgaaatgcttcttacgaagccactccttcgttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttcatcttcaatacccttgctgatggaaggaggttttcactcaaaatctcacgatacatggctccattcattctttcctttacacggatcagtcgtcctggtccctctggatcatccaaatgctctctagcaaacttcagacgggcctggacatgtactggcttaagcaggggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615630 True 332 lncRNA 0.50 1 482560 482891

Neighbor

gene id symbol gene type direction distance location
psmg2 psmg2 coding upstream 403 476232 ~ 482157 (+)
spire1a LOC106589129 coding upstream 133032 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 242992 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 277043 175807 ~ 205517 (+)
stk3 stk3 coding upstream 308133 154976 ~ 174427 (+)
seh1l seh1l coding downstream 82233 565124 ~ 587159 (+)
rnmt rnmt coding downstream 113871 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 255730 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 453431 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 798042 1280933 ~ 1361298 (+)
G2287456 NA non-coding upstream 10925 471322 ~ 471635 (+)
G2287453 NA non-coding upstream 13973 468146 ~ 468587 (+)
G2287451 NA non-coding upstream 18897 463462 ~ 463663 (+)
G2287449 NA non-coding upstream 19305 439106 ~ 463255 (+)
G2287448 NA non-coding upstream 45333 436748 ~ 437227 (+)
G2287466 NA non-coding downstream 292 483183 ~ 483457 (+)
G2287469 NA non-coding downstream 2505 485396 ~ 486605 (+)
G2287473 NA non-coding downstream 16503 499394 ~ 549250 (+)
G2287482 NA non-coding downstream 75014 557905 ~ 575122 (+)
G2287501 NA non-coding downstream 93525 576416 ~ 577121 (+)
G2287470 NA other downstream 3902 486793 ~ 487661 (+)
G2287973 NA other downstream 790483 1273374 ~ 1274170 (+)
triqk triqk other downstream 1726231 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1838983 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1897556 2380447 ~ 2381395 (+)

Expression


Co-expression Network