G2287466


Basic Information

Item Value
gene id G2287466
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 483183 ~ 483457 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615635
ccagcctggtgcaggtctacaattttgtttctggtgtcctttgacagctctttggtcttggccatagtggaatttggaatgtgactgtttgaggttgtggacaggtgtctttttatactgataaaaagttcaaacaggtgccattaatacaggtggaggacagaggagactcttaaagaagttacagatctgtgagagcaagacatcttgcttgtttgtaggtgaccaaatacttattttccaccataatttgcaaataaattcataaaaaatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615635 True 275 lncRNA 0.39 1 483183 483457

Neighbor

gene id symbol gene type direction distance location
psmg2 psmg2 coding upstream 1026 476232 ~ 482157 (+)
spire1a LOC106589129 coding upstream 133655 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 243615 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 277666 175807 ~ 205517 (+)
stk3 stk3 coding upstream 308756 154976 ~ 174427 (+)
seh1l seh1l coding downstream 81667 565124 ~ 587159 (+)
rnmt rnmt coding downstream 113305 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 255164 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 452865 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 797476 1280933 ~ 1361298 (+)
G2287464 NA non-coding upstream 292 482560 ~ 482891 (+)
G2287456 NA non-coding upstream 11548 471322 ~ 471635 (+)
G2287453 NA non-coding upstream 14596 468146 ~ 468587 (+)
G2287451 NA non-coding upstream 19520 463462 ~ 463663 (+)
G2287449 NA non-coding upstream 19928 439106 ~ 463255 (+)
G2287469 NA non-coding downstream 1939 485396 ~ 486605 (+)
G2287473 NA non-coding downstream 15937 499394 ~ 549250 (+)
G2287482 NA non-coding downstream 74448 557905 ~ 575122 (+)
G2287501 NA non-coding downstream 92959 576416 ~ 577121 (+)
G2287470 NA other downstream 3336 486793 ~ 487661 (+)
G2287973 NA other downstream 789917 1273374 ~ 1274170 (+)
triqk triqk other downstream 1725665 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1838417 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1896990 2380447 ~ 2381395 (+)

Expression


Co-expression Network