G2287469


Basic Information

Item Value
gene id G2287469
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 485396 ~ 486605 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615645
atttgttcaagataaacatgatttattccacCCATGTCTTGATTATAATTCATTTCTGTTTACAACACGAGCCACGGTAAATTTCAAGTATTAACtatgtatgctgtctatattgcTTGTAACGGATCTAAGCATTTTTACATACattgttatggctgtattgtttaaaaaaaacaatgttgtgggtccatcagacctgcggacattgggtgaataacaaaaagACCACACAAGGGTTAAGAGAAAGGGCTTGGCCAGTTGCTACTGTGTTCCGGGCAGCATTGTAACCCGACACAGTCCTAGATTGCAGGGTTTATGGGAAACGACAGCATTGGAATTCACTGATGCATGCATGGTAAGCCAAGGTGTTTCCCAGATTCTGGTCATGGATGTGAACGTTACTAAAACATTTGAACCCTGGAGTGTAGTCTGATGGTAGAACTAGACATTTAAAAAAGCTTGTTGCTGTGTAGCCAATACAAGAGTAATTTAACTTAAAACAAAGTCAAAGGCTATTAAATCATTTAAGGAAACTACATAAAACCAGTTTATTCTTAGATTACACTTTTACATAAAGGAATTGTATACTTGACAATTTCATTCAAAATAAACTGGTCATGaaattttgttttgttgtttaaaCCAAATACAATGCCTGTTTCCATTTTTGTacaatgaaaaatatttttccacttcttaaaaagtacagtatgtacatcaTGGAAACATTTCAACTCCTGTCCTCACACATGGTAGGACATTTCAAGTCATTTCTTataaaaaatataacatttaatTTTGCCCTCTGAAAACAGATGAACAGTATTACAGATTGGCAATGCATAGCAGGCCTAGTTCAGATCTCTGCCTTTTCAACGTGGATGCAAAGCAAAATAGAATGGACAACGTAACAAGAGGCTAAAACTATAACAACCAAACTGCTGATGCATTATTGTGACTCCATTCCACTATGGGGTAGCGGAGGCTGTCATAGCTGGTGTTttagaggggaggatagagagggatatagagaaggagggggatatagagagggagggggatatagagagagggggatatagagagagggggaaatagagagggggatatagagagagggggatatagagtgccttgcgaaagtattcggccccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615645 True 1156 lncRNA 0.38 2 485396 486605

Neighbor

gene id symbol gene type direction distance location
psmg2 psmg2 coding upstream 3239 476232 ~ 482157 (+)
spire1a LOC106589129 coding upstream 135868 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 245828 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 279879 175807 ~ 205517 (+)
stk3 stk3 coding upstream 310969 154976 ~ 174427 (+)
seh1l seh1l coding downstream 78519 565124 ~ 587159 (+)
rnmt rnmt coding downstream 110157 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 252016 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 449717 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 794328 1280933 ~ 1361298 (+)
G2287466 NA non-coding upstream 1939 483183 ~ 483457 (+)
G2287464 NA non-coding upstream 2505 482560 ~ 482891 (+)
G2287456 NA non-coding upstream 13761 471322 ~ 471635 (+)
G2287453 NA non-coding upstream 16809 468146 ~ 468587 (+)
G2287451 NA non-coding upstream 21733 463462 ~ 463663 (+)
G2287473 NA non-coding downstream 12789 499394 ~ 549250 (+)
G2287482 NA non-coding downstream 71300 557905 ~ 575122 (+)
G2287501 NA non-coding downstream 89811 576416 ~ 577121 (+)
G2287528 NA non-coding downstream 155668 642273 ~ 642542 (+)
G2287470 NA other downstream 188 486793 ~ 487661 (+)
G2287973 NA other downstream 786769 1273374 ~ 1274170 (+)
triqk triqk other downstream 1722517 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1835269 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1893842 2380447 ~ 2381395 (+)

Expression


Co-expression Network