G2287501


Basic Information

Item Value
gene id G2287501
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_050572.1
NCBI id CM025859.1
chromosome length 41837469
location 576416 ~ 577121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2615681
agctgtgttgcttttacgccaaacataacgttttgcattgcattttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctagagagagtttgcttcactgaaagtaaaggggctg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2615681 True 213 lncRNA 0.40 2 576416 577121

Neighbor

gene id symbol gene type direction distance location
psmg2 psmg2 coding upstream 94259 476232 ~ 482157 (+)
spire1a LOC106589129 coding upstream 226888 316903 ~ 349528 (+)
rpl30 LOC106589133 coding upstream 336848 233676 ~ 240640 (+)
LOC110489350 uk114 coding upstream 370899 175807 ~ 205517 (+)
stk3 stk3 coding upstream 401989 154976 ~ 174427 (+)
rnmt rnmt coding downstream 19641 596762 ~ 616427 (+)
rims2b LOC106570772 coding downstream 161500 738621 ~ 899937 (+)
LOC110487806 LOC106570773 coding downstream 359201 936322 ~ 962116 (+)
ncaldb LOC105006551 coding downstream 703812 1280933 ~ 1361298 (+)
LOC110511936 spire1 coding downstream 1023229 1600350 ~ 1639573 (+)
G2287482 NA non-coding upstream 1294 557905 ~ 575122 (+)
G2287473 NA non-coding upstream 27166 499394 ~ 549250 (+)
G2287469 NA non-coding upstream 89811 485396 ~ 486605 (+)
G2287466 NA non-coding upstream 92959 483183 ~ 483457 (+)
G2287464 NA non-coding upstream 93525 482560 ~ 482891 (+)
seh1l seh1l non-coding downstream 8238 565124 ~ 587159 (+)
G2287528 NA non-coding downstream 65152 642273 ~ 642542 (+)
G2287529 NA non-coding downstream 69106 646227 ~ 647493 (+)
G2287532 NA non-coding downstream 72985 650106 ~ 650366 (+)
G2287538 NA non-coding downstream 112228 689349 ~ 689598 (+)
G2287470 NA other upstream 88755 486793 ~ 487661 (+)
G2287973 NA other downstream 696253 1273374 ~ 1274170 (+)
triqk triqk other downstream 1632001 2209019 ~ 2255119 (+)
G2288669 NA other downstream 1744753 2321874 ~ 2324182 (+)
G2288814 NA other downstream 1803326 2380447 ~ 2381395 (+)
G2289325 NA other downstream 2483321 3060442 ~ 3060779 (+)

Expression


Co-expression Network